WERAM Information

Tag Content
WERAM ID WERAM-Arl-0028
Ensembl Protein ID fgenesh1_pg.C_scaffold_8001866
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh1_pg.C_scaffold_8001866 fgenesh1_pg.C_scaffold_8001866 fgenesh1_pg.C_scaffold_8001866
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.80e-09 37.7 704 804
Organism Arabidopsis lyrata
Domain Profile
  Me_Reader PHD
                         PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                                      iC vC  ++ g+  ++ Cd+C+ +fH++C++l+  ++p+g +w+C+sC 
  fgenesh1_pg.C_scaffold_8001866 704 VICSVC--HYGGK--LILCDGCPSAFHANCLGLE--EVPDG-DWFCESCC 746
                                     689999..45553..9******************..*****.*******6 PP
                         PHD.txt   3 iClvCg.......kddegekemvqCdeCddwfHlkCvklp..lsslpeg......kswyCpsC 50 
                                     +C +Cg        ++++e++++ C++C+  +H +C+           +      ++w+C + 
  fgenesh1_pg.C_scaffold_8001866 746 CCGACGqfflkatSKYAKEEKFISCKQCELKYHPSCLRYDgaG--D--SldtflgEKWFCSKD 804
                                     688885466644333344555*******************441..2..223456689***874 PP
Protein Sequence
(Fasta)		MPAPEEEEPI FGWNSTGGRN LRRKKLLVGD KIEVRSLEEG FLGSWYLGTV TSARKRRRRS 60
IRYDNILSDD GTDSLVETVD VSDVVEGLDD CTDVSDTFRG RLRPVPPTLQ FGKSNLAYGL 120
CVDVFFSEAW WEGVLFDHEN GSEKRRVFFP DLGDELDADL QSLRITQDWN EATETWECRG 180
RWLFLDLIEK YKEDNYLPVS VRQLWYDIRD RIGFVRIQEW TCSTRHLWED LMLEVIEDNL 240
RITIHQFLHD YDAEIYPQLK LLNEASKAVY ETNACLSSVL AIAPQEQQFS CIDKDYKPAS 300
QRCQSLSVLT SASGIRSDAS YINKATETSS KKSTAAHKKM ILHKKPGIWH PFDCLAKSGP 360
QAVSSFIRSP LPPMAMRVRM HLKYMGWTIE HMVDEAGRQR FRYLSPNGRL TEHSLRQVCF 420
RLKQRDESLT TPGMANPPSL SCENQTYNTQ EIRCIVLALP ACNRSVALGE GMKPSTDTLL 480
EYETQGNEEV FTRESRNFCP RNAFPGQKKT LHVRLEPKTK AQGIILRLKS KRKQKPKKDE 540
VIVGLQNVNL SMRRGHTSRR LMDIKNRVTG RSKTHVLRSS KRVQRVITPI SRHHSPRSIL 600
SWLIDNNVIL PRENIRYRNQ KDDTVIKEGK LTREGIKCSC CRRIFTISGF EVHANGGSCR 660
AAANIFLDDG RSLLECQVEA YETRKKAQPP DILKMKLRQG ENDVICSVCH YGGKLILCDG 720
CPSAFHANCL GLEEVPDGDW FCESCCCGAC GQFFLKATSK YAKEEKFISC KQCELKYHPS 780
CLRYDGAGDS LDTFLGEKWF CSKDCEEIFV NLCELIGKPR EVGVEKLTWR LVQSFEPNMY 840
GDDAYKIEAV AENHCKLSVA LDVMHELFEP VKRPHGGRDL AEDVIFSRWS KFKRLNFSGF 900
YTVLLERNEE LVTVATVRIL GKKVAEMPFI GTRFQHRQRG MCRVLINELE KVLIDLGVER 960
LVLPAVPCVL NTWINSFGFT KMTISERKEF LKFTLLEFGR TILCQKILIK SSVVDPIPST 1020
VSQGEQHCDI LRIEDNSASD DRSDLHM 1047
Nucleotide Sequence
(Fasta)		ATGCCAGCGC CGGAGGAAGA AGAGCCGATA TTCGGCTGGA ACAGCACCGG TGGACGAAAT 60
CTCCGCCGGA AAAAGCTTCT CGTCGGTGAT AAAATAGAGG TAAGGAGTCT TGAGGAAGGG 120
TTTCTGGGTT CTTGGTATTT AGGAACTGTT ACTTCAGCGA GAAAGCGACG TCGGCGTTCT 180
ATCAGATATG ATAACATTCT GTCTGATGAT GGTACTGATT CCCTTGTGGA AACTGTTGAT 240
GTTTCGGATG TAGTAGAAGG GTTGGATGAT TGCACTGATG TTTCTGATAC TTTCCGTGGA 300
CGTTTAAGAC CTGTGCCGCC AACGCTGCAA TTTGGTAAGT CGAACCTTGC GTATGGGCTT 360
TGCGTTGATG TGTTTTTCAG TGAAGCTTGG TGGGAAGGTG TGCTCTTTGA CCACGAAAAT 420
GGTTCTGAGA AAAGGCGGGT GTTTTTCCCT GATTTGGGTG ATGAATTGGA TGCTGATCTT 480
CAATCTTTAC GTATTACTCA GGATTGGAAT GAGGCTACAG AGACGTGGGA GTGTCGTGGG 540
AGATGGTTGT TTCTTGATTT GATTGAGAAA TATAAGGAAG ATAACTATCT CCCGGTTTCG 600
GTAAGGCAAC TTTGGTATGA CATACGGGAC AGGATTGGTT TTGTAAGAAT CCAAGAATGG 660
ACTTGCTCTA CTAGGCATTT ATGGGAAGAT TTGATGCTAG AGGTGATTGA AGATAATCTT 720
AGAATCACCA TTCACCAGTT TCTTCATGAT TATGACGCTG AAATATACCC TCAGTTGAAG 780
CTCTTAAATG AAGCTTCTAA GGCGGTTTAT GAGACCAATG CTTGTCTCAG CAGTGTGCTA 840
GCGATTGCTC CACAAGAACA ACAATTTTCC TGCATTGACA AAGATTATAA ACCGGCAAGC 900
CAGAGATGCC AGTCCTTGTC TGTCTTGACT TCTGCTTCTG GCATAAGGTC AGATGCGAGT 960
TACATCAATA AGGCAACAGA AACTTCCAGC AAAAAATCTA CTGCCGCTCA TAAAAAGATG 1020
ATACTACACA AGAAACCTGG AATCTGGCAT CCTTTCGATT GTCTTGCTAA ATCAGGCCCA 1080
CAAGCTGTGT CGAGCTTTAT CAGGTCACCG TTACCGCCAA TGGCCATGCG TGTCAGGATG 1140
CATCTTAAGT ATATGGGATG GACCATAGAA CATATGGTAG ACGAAGCTGG AAGGCAAAGG 1200
TTTCGCTACC TCTCACCAAA TGGAAGACTA ACAGAGCATT CTCTTCGTCA AGTATGTTTC 1260
AGATTGAAAC AACGTGATGA ATCCCTGACT ACTCCGGGGA TGGCTAACCC TCCTTCTCTG 1320
TCTTGTGAAA ACCAGACGTA TAACACCCAG GAAATAAGGT GTATTGTTTT GGCATTGCCT 1380
GCCTGTAATA GAAGTGTCGC TCTTGGTGAA GGAATGAAGC CGTCTACTGA TACCTTGCTT 1440
GAGTATGAAA CTCAAGGAAA CGAGGAGGTC TTCACGAGGG AAAGCCGCAA TTTCTGTCCC 1500
AGAAATGCCT TCCCGGGTCA GAAAAAGACA CTCCATGTTA GGCTCGAGCC AAAAACAAAA 1560
GCTCAAGGCA TCATCCTAAG GTTGAAAAGT AAGCGTAAAC AGAAACCTAA GAAGGACGAA 1620
GTGATTGTAG GTTTGCAGAA TGTCAATCTG AGCATGAGAA GGGGGCACAC TTCAAGAAGG 1680
TTAATGGATA TTAAGAATCG AGTAACTGGT CGTAGTAAAA CCCATGTGTT AAGATCAAGC 1740
AAAAGAGTGC AACGGGTAAT AACTCCCATC TCAAGACATC ACAGTCCACG TAGTATTCTT 1800
TCCTGGCTCA TTGACAACAA TGTGATTCTA CCAAGGGAAA ATATACGATA CCGTAACCAA 1860
AAGGATGACA CTGTGATAAA AGAGGGGAAA CTAACCCGTG AGGGTATAAA ATGCAGTTGT 1920
TGCCGTAGAA TTTTCACCAT AAGTGGCTTT GAAGTTCATG CTAATGGTGG ATCCTGCAGA 1980
GCAGCAGCCA ATATCTTCCT GGATGATGGA AGATCTCTTT TGGAATGCCA AGTAGAAGCC 2040
TATGAAACAA GAAAGAAAGC ACAACCACCT GATATTCTGA AGATGAAATT GCGTCAAGGG 2100
GAGAACGATG TAATTTGCTC TGTTTGTCAC TATGGCGGTA AACTGATTCT CTGTGATGGA 2160
TGTCCATCTG CCTTCCATGC AAATTGTCTC GGGCTGGAGG AAGTTCCAGA TGGTGACTGG 2220
TTCTGCGAGT CATGTTGTTG TGGTGCATGT GGACAATTCT TTCTCAAGGC TACTAGCAAA 2280
TATGCCAAGG AGGAAAAGTT TATCAGTTGC AAGCAATGCG AACTTAAATA TCACCCTAGT 2340
TGTCTGCGCT ATGATGGTGC CGGTGATTCA TTGGATACAT TCTTGGGAGA AAAGTGGTTT 2400
TGCAGCAAGG ACTGTGAAGA GATATTTGTA AATCTCTGTG AGCTTATTGG AAAACCGAGA 2460
GAGGTGGGCG TGGAGAAATT AACTTGGAGA CTGGTGCAGT CCTTTGAACC AAATATGTAT 2520
GGGGATGACG CTTATAAAAT TGAGGCTGTG GCAGAAAATC ACTGCAAACT CAGTGTTGCC 2580
CTTGATGTGA TGCATGAACT TTTCGAGCCT GTAAAAAGAC CTCATGGTGG AAGAGATCTT 2640
GCTGAAGATG TTATTTTTAG CAGATGGTCA AAATTCAAAC GTTTGAATTT CAGTGGATTT 2700
TACACAGTAC TTCTAGAAAG GAACGAAGAA CTGGTTACTG TGGCTACTGT CAGAATTTTG 2760
GGGAAAAAGG TTGCAGAAAT GCCCTTTATC GGTACTAGAT TCCAGCATCG CCAGCGTGGG 2820
ATGTGCCGGG TTTTGATTAA TGAACTCGAA AAGGTGCTCA TTGACTTGGG AGTTGAGAGG 2880
CTGGTCCTGC CTGCAGTTCC ATGCGTGCTG AACACATGGA TCAACTCATT TGGATTTACA 2940
AAGATGACAA TCTCCGAAAG AAAAGAATTT CTTAAATTTA CCTTGTTGGA ATTCGGACGA 3000
ACAATATTGT GCCAGAAGAT CTTAATCAAG AGCAGCGTGG TAGATCCAAT TCCAAGTACA 3060
GTGTCTCAAG GTGAACAACA CTGTGACATC CTTAGGATTG AAGACAATTC TGCTTCTGAT 3120
GATAGATCAG ATTTACATAT GTAA 3145
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Met-0088 KEH34313 Medicago truncatula 37 0.0 668
WERAM-Mua-0099 GSMUA_Achr6P32880_001 Musa acuminata 36 8e-161 565
WERAM-Prp-0127 EMJ08257 Prunus persica 53 3e-150 530
WERAM-Sot-0068 PGSC0003DMT400056775 Solanum tuberosum 50 2e-146 517
WERAM-Sol-0044 Solyc03g071550.1.1 Solanum lycopersicum 52 1e-142 505
WERAM-Glm-0132 GLYMA11G27510.1 Glycine max 53 6e-138 489
WERAM-Thc-0093 EOY15722 Theobroma cacao 55 4e-134 476
WERAM-Pot-0028 POPTR_0002s11940.1 Populus trichocarpa 40 1e-124 445
WERAM-Amt-0093 ERN04860 Amborella trichopoda 44 4e-110 397
WERAM-Tra-0147 Traes_4BL_F428A5CDC.1 Triticum aestivum 46 6e-108 389
WERAM-Tru-0037 TRIUR3_18780-P1 Triticum urartu 45 3e-107 387
WERAM-Aet-0069 EMT23788 Aegilops tauschii 45 8e-105 379
WERAM-Sei-0136 Si038769m Setaria italica 42 7e-103 373
WERAM-Sob-0012 Sb01g038485.1 Sorghum bicolor 43 1e-100 365
WERAM-Sem-0001 EFJ24916 Selaginella moellendorffii 41 3e-91 334
WERAM-Viv-0120 VIT_19s0014g01500.t01 Vitis vinifera 38 5e-86 317
WERAM-Zem-0139 GRMZM2G434715_P01 Zea mays 38 1e-82 306
WERAM-Art-0071 AT3G14980.1 Arabidopsis thaliana 36 3e-79 294
WERAM-Bro-0088 Bo5g005570.1 Brassica oleracea 36 5e-79 293
WERAM-Brr-0136 Bra027290.1-P Brassica rapa 36 6e-79 293
WERAM-Orbr-0058 OB04G37750.1 Oryza brachyantha 35 2e-78 291
WERAM-Orm-0079 OMERI07G23850.1 Oryza meridionalis 37 2e-77 288
WERAM-Orp-0069 OPUNC07G04530.3 Oryza punctata 37 6e-77 286
WERAM-Ori-0082 BGIOSGA025231-PA Oryza indica 37 7e-77 286
WERAM-Org-0072 ORGLA07G0040300.1 Oryza glaberrima 37 8e-77 286
WERAM-Orgl-0070 OGLUM07G04140.1 Oryza glumaepatula 37 8e-77 286
WERAM-Orr-0074 ORUFI07G04440.1 Oryza rufipogon 37 9e-77 286
WERAM-Orni-0071 ONIVA07G03330.1 Oryza nivara 37 9e-77 286
WERAM-Orl-0111 KN542919.1_FGP001 Oryza longistaminata 37 1e-76 285
WERAM-Brd-0130 BRADI5G27517.1 Brachypodium distachyon 36 2e-75 281
WERAM-Orb-0084 OBART07G27320.1 Oryza barthii 36 2e-75 281
WERAM-Hov-0086 MLOC_65889.1 Hordeum vulgare 35 5e-75 280
WERAM-Lep-0071 LPERR07G04130.1 Leersia perrieri 37 3e-74 278
WERAM-Php-0118 PP1S59_348V6.1 Physcomitrella patens 34 2e-70 265
WERAM-Ors-0046 OS04T0691700-01 Oryza sativa 36 3e-55 214
WERAM-Sah-0036 ENSSHAP00000004327.1 Sarcophilus harrisii 41 1e-10 67.0
WERAM-Ten-0089 ENSTNIP00000010106.1 Tetraodon nigroviridis 40 2e-10 66.2
WERAM-Ptv-0117 ENSPVAP00000010379.1 Pteropus vampyrus 43 3e-10 65.5
WERAM-Eqc-0088 ENSECAP00000010777.1 Equus caballus 55 3e-10 65.5
WERAM-Sus-0050 ENSSSCP00000007942.2 Sus scrofa 44 6e-10 64.3
WERAM-Caf-0121 ENSCAFP00000015830.3 Canis familiaris 44 6e-10 64.3
WERAM-Dar-0021 ENSDARP00000040234.7 Danio rerio 40 7e-10 63.9
WERAM-Asm-0063 ENSAMXP00000007066.1 Astyanax mexicanus 40 9e-10 63.9
WERAM-Cym-0028 CMR472CT Cyanidioschyzon merolae 47 1e-09 63.5
WERAM-Fia-0070 ENSFALP00000005276.1 Ficedula albicollis 44 1e-09 63.2
WERAM-Mod-0142 ENSMODP00000020299.4 Monodelphis domestica 44 1e-09 63.2
WERAM-Leo-0022 ENSLOCP00000004721.1 Lepisosteus oculatus 44 1e-09 63.2
WERAM-Anc-0173 ENSACAP00000016345.3 Anolis carolinensis 44 1e-09 63.2
WERAM-Ora-0100 ENSOANP00000019048.3 Ornithorhynchus anatinus 44 2e-09 63.2
WERAM-Loa-0031 ENSLAFP00000002156.3 Loxodonta africana 44 2e-09 63.2
WERAM-Pes-0109 ENSPSIP00000013249.1 Pelodiscus sinensis 44 2e-09 63.2
Created Date 25-Jun-2016