WERAM Information

Tag Content
WERAM ID WERAM-Bro-0088
Ensembl Protein ID Bo5g005570.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo5g005570 Bo5g005570.1 Bo5g005570.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 6.80e-10 40.5 594 690
Organism Brassica oleracea
Domain Profile
  Me_Reader PHD
       PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                    C +C  d+ +   +++Cd+C+  +H+ C++++   lp g +w+Cp+C+
  Bo5g005570.1 594 ACGIC-GDGGD---LLCCDGCPSTYHQACLGIE--VLPVG-DWHCPNCT 635
                   799**.44444...9******************..*****.*******8 PP
       PHD.txt   4 ClvCg.....kddegekemvqCdeCddwfHlkCvklp.lsslpeg.kswyCpsCk 51 
                   C +C+      d+++++ ++ Cd+C++ +H++C++    ++++++ +s++ p+C 
  Bo5g005570.1 636 CKFCDavvhsGDEDENPSLLSCDTCERKYHQSCMSEVeAHNVQSSaSSFCGPKCS 690
                   999965554322333444****************876244444444568778886 PP
Protein Sequence
(Fasta)		MEGGSGSGER ARVVPRLSQK EKRDGLCRRS ASSSTGTKRS FHNKRSKVVV SESESSDEFM 60
KPPARSVDRK TLGAKGKKDD RNGFVRRAGM KKLDVFEFDE YDGFDSANLM RKRFDNGTVG 120
VSGRVSFPPR RFDNGVVGGS GSGREGVFVR REKPYLNGGS SMSLSSESDS DEAIRVQGRN 180
GVLKVKVNNK TSTLPASVIP REGEVYESLP SSSGKAQKRE NVVAKPSFRK PNNYSESEDS 240
DVERKAKKRK PKKETDTKST ESLKPAAREE RRGMRNGGTE KQRLREKIKG MLTDAGWTID 300
YRPRRNQTYL DTVYVNPSGI AFWSIIKAYD AFRQQLKEED IDARSRKDVA AVVSVSEDIV 360
NNLARKVKKT GTEASKKRGK DYSGSESEKD SYGEGVDSDT CEERFVKMNG KSIKRRRIEP 420
IRDDLHSKSK RPSYYNDARP SPRSDSRYLD GRLSNKTGRC TLKVRSSEDK KNPAINGFNP 480
YSGKRTLLSW LIDCGVVQVR EKVQYMNHQC TKVMLEGWVT RAGIHCACCS KILTISRFEI 540
HAGSKSCQPF QNIYLESGSS LLHCQIRAWN MQKDAKSLGF HHVDADGDDP HDDACGICGD 600
GGDLLCCDGC PSTYHQACLG IEVLPVGDWH CPNCTCKFCD AVVHSGDEDE NPSLLSCDTC 660
ERKYHQSCMS EVEAHNVQSS ASSFCGPKCS ELFKKLKKYL GVKHEIEGGY SWSLIHRVDT 720
DSKFNSQLSA QRIENNSKLA VGLAIMDECF LPIIDRRSGI NLIRNVLYNC GSNFNRINYT 780
SFYTAILERG DEIICAASLR FHGMQLAEMP FIGTRHIYRR QGMCRRLFDA IESAMRSLKV 840
EKLVIPAIPD FLHAWTGNFG FSPLDDAVRK EMRSLNTLVF PGIDMLHKPL LHEEKKSKVA 900
AVGDCVVVHN DAMGSEIETE KKSESASFAE TCLNSSGHVA DDDADCDKKT LVSHEETSPI 960
CTPVETTMDT VSKPENGESR RCIPGEESGI SFSSCQFTLK SCSKQRDNTG SSCEDVNVEA 1020
VAKLLSLEIV QASTEVQIEN NLSSSTSGLG SSDMSSITQE GKTGQNSPNR EATPSCKDSD 1080
RLGAGAKLAV SKADGLLL 1098
Nucleotide Sequence
(Fasta)		ATGGAAGGAG GTAGTGGGTC GGGTGAGCGG GCACGGGTAG TTCCGAGGTT GAGTCAGAAG 60
GAGAAAAGAG ATGGGCTTTG CAGGAGGAGT GCGTCTTCTT CTACTGGAAC AAAGCGTAGT 120
TTTCATAACA AGAGATCCAA AGTTGTTGTT AGCGAGTCCG AGTCGAGTGA TGAGTTCATG 180
AAGCCTCCAG CGAGGAGCGT TGACCGCAAA ACCCTTGGAG CGAAAGGCAA GAAGGATGAC 240
CGAAATGGGT TTGTGAGGAG GGCAGGGATG AAGAAGTTGG ATGTGTTTGA GTTTGACGAG 300
TACGATGGGT TCGATAGCGC GAATTTGATG AGGAAGCGTT TTGATAATGG CACCGTTGGT 360
GTCAGTGGGA GAGTCTCTTT CCCGCCGAGA AGGTTTGATA ATGGTGTTGT GGGAGGGTCT 420
GGATCAGGCA GGGAGGGTGT GTTTGTTAGG AGGGAAAAAC CGTACTTGAA TGGCGGGAGT 480
AGTATGAGTT TGAGTAGTGA ATCTGATTCA GATGAGGCGA TAAGGGTGCA GGGGAGAAAC 540
GGTGTTCTGA AGGTCAAGGT AAACAATAAA ACGAGCACTC TCCCAGCTTC AGTCATTCCC 600
CGGGAAGGTG AAGTATATGA GAGTCTGCCT TCCTCCTCTG GGAAGGCACA AAAGCGTGAG 660
AATGTTGTAG CAAAACCATC CTTTAGGAAA CCAAACAATT ATTCGGAGTC AGAAGACAGC 720
GACGTGGAGA GGAAAGCGAA AAAAAGGAAA CCTAAGAAGG AAACAGATAC CAAATCCACT 780
GAATCGTTGA AACCTGCAGC GAGGGAAGAG AGGAGGGGAA TGCGTAATGG CGGAACAGAG 840
AAGCAAAGAC TACGTGAGAA GATTAAGGGA ATGCTTACTG ATGCAGGATG GACGATAGAC 900
TACAGACCTA GGAGGAACCA AACTTACCTG GATACTGTAT ACGTAAACCC CTCAGGGATA 960
GCATTTTGGT CAATAATTAA AGCATATGAT GCTTTTCGGC AGCAGTTAAA GGAGGAAGAC 1020
ATCGATGCTA GATCGAGGAA GGACGTTGCT GCAGTCGTTT CTGTGTCAGA GGATATTGTG 1080
AACAATCTAG CAAGGAAGGT GAAGAAGACA GGGACTGAGG CTTCAAAGAA ACGGGGAAAG 1140
GATTACAGTG GTAGCGAGAG TGAAAAGGAT AGCTATGGAG AAGGAGTAGA CAGTGATACC 1200
TGTGAAGAGA GGTTCGTAAA GATGAATGGG AAATCTATAA AAAGAAGAAG AATTGAACCT 1260
ATTCGTGATG ATCTACACTC GAAAAGTAAA AGACCGTCGT ACTACAATGA TGCAAGGCCG 1320
TCTCCTAGAT CAGATTCACG TTATCTAGAT GGAAGATTAA GCAATAAAAC AGGAAGATGT 1380
ACTTTGAAGG TGCGTAGCTC CGAGGATAAA AAGAATCCAG CGATCAACGG GTTCAATCCA 1440
TACTCTGGGA AAAGGACATT GCTCTCTTGG TTGATTGATT GTGGAGTTGT CCAGGTAAGA 1500
GAGAAGGTGC AGTACATGAA CCATCAATGC ACAAAGGTGA TGCTGGAGGG ATGGGTAACA 1560
AGAGCGGGGA TTCATTGCGC CTGCTGCAGT AAAATCCTCA CAATCTCCAG GTTTGAGATC 1620
CATGCCGGGA GCAAGTCATG TCAGCCTTTC CAAAATATAT ACCTGGAATC TGGCAGTTCT 1680
CTTCTCCATT GCCAAATCAG AGCGTGGAAT ATGCAAAAAG ATGCCAAGAG TCTTGGTTTT 1740
CATCACGTGG ACGCCGACGG CGATGATCCG CATGATGATG CGTGTGGTAT CTGTGGCGAT 1800
GGTGGAGATT TGCTTTGCTG TGATGGTTGT CCATCAACAT ACCATCAAGC CTGCTTAGGT 1860
ATTGAGGTGC TTCCGGTGGG TGACTGGCAC TGTCCAAATT GCACTTGCAA ATTTTGTGAT 1920
GCTGTGGTGC ATTCTGGTGA CGAAGACGAA AATCCTTCAT TGCTTTCCTG CGACACGTGT 1980
GAGAGAAAAT ATCACCAATC ATGCATGAGT GAGGTGGAAG CTCATAATGT TCAGTCTTCA 2040
GCTTCTTCGT TCTGTGGGCC TAAGTGCTCA GAGCTCTTCA AAAAGCTAAA GAAGTATCTT 2100
GGTGTCAAAC ATGAAATTGA AGGCGGCTAC TCATGGTCTC TTATACATAG GGTGGACACG 2160
GATTCAAAAT TCAACTCTCA ATTGTCGGCA CAAAGGATTG AAAACAATTC AAAGCTAGCT 2220
GTCGGGCTGG CGATCATGGA TGAGTGTTTT TTGCCCATAA TTGACAGGAG GAGTGGGATC 2280
AATCTAATTC GCAATGTCCT TTATAATTGT GGATCCAATT TCAACCGGAT TAATTATACT 2340
AGCTTCTACA CTGCTATCCT AGAGAGAGGA GATGAAATCA TATGTGCGGC ATCTCTCAGG 2400
TTCCATGGAA TGCAATTGGC GGAGATGCCA TTTATTGGAA CCAGGCATAT ATACAGGCGT 2460
CAAGGAATGT GCCGTCGGCT TTTTGATGCA ATTGAGTCGG CTATGCGTTC TCTTAAGGTT 2520
GAGAAATTGG TAATCCCTGC CATTCCAGAC TTTTTGCACG CCTGGACCGG TAACTTCGGA 2580
TTCAGCCCTC TTGATGATGC AGTTAGGAAA GAGATGAGGT CCCTCAACAC GTTGGTGTTT 2640
CCTGGAATAG ACATGTTACA CAAACCTCTC CTCCATGAAG AAAAGAAGTC CAAAGTCGCA 2700
GCTGTAGGTG ACTGTGTCGT TGTACATAAC GATGCAATGG GTTCAGAGAT AGAGACAGAA 2760
AAGAAATCTG AATCTGCGTC TTTTGCTGAA ACTTGTCTAA ACTCCAGTGG ACATGTCGCT 2820
GATGATGATG CAGACTGCGA CAAGAAGACT CTCGTTTCTC ATGAGGAAAC CAGTCCTATA 2880
TGTACACCAG TTGAAACAAC CATGGACACG GTTTCCAAGC CGGAGAATGG TGAATCGAGG 2940
AGATGTATAC CTGGTGAAGA ATCTGGGATT AGCTTTTCTT CTTGTCAGTT CACATTGAAG 3000
TCTTGCTCCA AGCAACGTGA CAATACAGGA TCATCATGCG AAGATGTGAA TGTAGAAGCT 3060
GTTGCTAAGT TACTATCTCT GGAAATCGTA CAAGCATCCA CTGAGGTTCA GATTGAAAAC 3120
AATCTCTCTT CATCTACTTC TGGTTTAGGA TCATCAGATA TGAGCTCCAT CACTCAAGAA 3180
GGCAAGACTG GACAAAACTC ACCGAACAGA GAGGCCACTC CTTCATGTAA AGACAGTGAC 3240
AGACTCGGTG CTGGTGCTAA GTTGGCTGTA TCGAAAGCAG ATGGTTTACT TTTATGA 3298
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0108 Bra020653.1-P Brassica rapa 96 0.0 1051
WERAM-Thc-0054 EOY05682 Theobroma cacao 53 0.0 724
WERAM-Viv-0024 VIT_05s0020g03420.t01 Vitis vinifera 48 0.0 715
WERAM-Prp-0110 EMJ25684 Prunus persica 57 0.0 697
WERAM-Glm-0011 GLYMA01G44885.1 Glycine max 56 0.0 682
WERAM-Met-0033 KEH43887 Medicago truncatula 50 0.0 655
WERAM-Art-0101 AT4G14920.1 Arabidopsis thaliana 48 0.0 647
WERAM-Sol-0114 Solyc09g076010.2.1 Solanum lycopersicum 52 0.0 639
WERAM-Mua-0076 GSMUA_Achr4P21300_001 Musa acuminata 44 3e-152 537
WERAM-Pot-0115 POPTR_0010s09810.1 Populus trichocarpa 56 3e-150 530
WERAM-Orm-0068 OMERI07G03260.1 Oryza meridionalis 41 3e-139 493
WERAM-Orgl-0070 OGLUM07G04140.1 Oryza glumaepatula 40 1e-137 488
WERAM-Org-0072 ORGLA07G0040300.1 Oryza glaberrima 40 3e-137 487
WERAM-Orr-0074 ORUFI07G04440.1 Oryza rufipogon 43 4e-137 486
WERAM-Orni-0071 ONIVA07G03330.1 Oryza nivara 40 4e-137 486
WERAM-Orl-0111 KN542919.1_FGP001 Oryza longistaminata 40 8e-137 486
WERAM-Ori-0082 BGIOSGA025231-PA Oryza indica 40 4e-136 483
WERAM-Orbr-0080 OB07G13580.1 Oryza brachyantha 39 2e-134 478
WERAM-Lep-0071 LPERR07G04130.1 Leersia perrieri 39 2e-133 474
WERAM-Tru-0097 TRIUR3_33650-P1 Triticum urartu 42 1e-131 468
WERAM-Tra-0100 Traes_2DS_F7E8E6B22.1 Triticum aestivum 41 1e-129 462
WERAM-Aet-0042 EMT29012 Aegilops tauschii 41 3e-129 460
WERAM-Sei-0098 Si028686m Setaria italica 41 3e-128 457
WERAM-Sob-0017 Sb02g004100.1 Sorghum bicolor 38 1e-127 455
WERAM-Orp-0069 OPUNC07G04530.3 Oryza punctata 43 7e-120 429
WERAM-Zem-0135 GRMZM2G412492_P01 Zea mays 40 2e-110 398
WERAM-Amt-0036 ERN16161 Amborella trichopoda 47 7e-102 369
WERAM-Hov-0069 MLOC_5844.1 Hordeum vulgare 41 5e-89 327
WERAM-Brd-0130 BRADI5G27517.1 Brachypodium distachyon 43 5e-88 323
WERAM-Orb-0048 OBART04G30730.1 Oryza barthii 41 2e-83 308
WERAM-Arl-0059 fgenesh2_kg.3__ 1623__ AT3G14980.1 Arabidopsis lyrata 41 3e-83 308
WERAM-Sem-0001 EFJ24916 Selaginella moellendorffii 43 6e-83 306
WERAM-Sot-0081 PGSC0003DMT400067527 Solanum tuberosum 40 4e-82 304
WERAM-Ors-0046 OS04T0691700-01 Oryza sativa 44 4e-70 264
WERAM-Php-0118 PP1S59_348V6.1 Physcomitrella patens 44 3e-54 211
WERAM-Tag-0008 ENSTGUP00000000641.1 Taeniopygia guttata 41 1e-07 56.6
WERAM-Gaga-0065 ENSGALP00000010110.4 Gallus gallus 41 2e-07 56.6
WERAM-Meg-0048 ENSMGAP00000004625.2 Meleagris gallopavo 41 2e-07 56.6
WERAM-Anp-0025 ENSAPLP00000003226.1 Anas platyrhynchos 41 2e-07 56.2
WERAM-Lac-0079 ENSLACP00000010253.1 Latimeria chalumnae 41 4e-07 55.1
WERAM-Ora-0065 ENSOANP00000009850.3 Ornithorhynchus anatinus 39 5e-07 54.7
WERAM-Anc-0148 ENSACAP00000014142.2 Anolis carolinensis 41 2e-06 52.4
WERAM-Mod-0040 ENSMODP00000005845.3 Monodelphis domestica 41 3e-06 52.0
WERAM-Sah-0130 ENSSHAP00000013860.1 Sarcophilus harrisii 41 7e-06 50.8
Created Date 25-Jun-2016