WERAM Information

Tag Content
WERAM ID WERAM-Sot-0048
Ensembl Protein ID PGSC0003DMT400043561
Gene Name PGSC0003DMG400016917
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400016917 PGSC0003DMT400043561 PGSC0003DMT400043561
PGSC0003DMG400016917 PGSC0003DMT400043562 PGSC0003DMT400043562
PGSC0003DMG400016917 PGSC0003DMT400043563 PGSC0003DMT400043563
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.20e-08 35.6 85 254
Organism Solanum tuberosum
Domain Profile
  Me_Reader PHD
               PHD.txt 18 vqCdeCddw 26
                          ++C+ C++ 
  PGSC0003DMT400043561 85 IKCKCCQKV 93
                          677777764 PP
               PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsC 50 
                           ++C vC  ++ ge  ++ CdeC+  fH+ C++++  ++p+g +w+CpsC
  PGSC0003DMT400043561 156 NVCSVC--HYGGE--LLLCDECPSSFHTGCLGMK--EVPDG-EWFCPSC 197
                           78****..45553..9******************..*****.******* PP
               PHD.txt   3 iClvCgkddegeke.......mvqCdeCddwfHlkCvklp....lsslpegkswyCps 49 
                           +C +Cg++ +++++       ++ C +C++ +H++Cv  +    l   p g +w+C++
  PGSC0003DMT400043561 198 CCEMCGESRFDKNKdhftessLLICCQCEHKYHARCVRDKglqkLDCYPVG-KWFCNK 254
                           8999*8776665555667777777889************975544445556.9***96 PP
Protein Sequence
(Fasta)		MLKEGKSRSS RTVVDGTESQ SSARQLRSSK RARQATVSSS LHHTPRTVLS WLIDNNVVLP 60
RAKVQYRVKK DGRPMAEGQI TRAGIKCKCC QKVYGISNFE VHAGSSYHRP SANIFLEDGR 120
SLLDCQLQMK EKSIVRNTRK RSPLLKKHSH LGTNDNVCSV CHYGGELLLC DECPSSFHTG 180
CLGMKEVPDG EWFCPSCCCE MCGESRFDKN KDHFTESSLL ICCQCEHKYH ARCVRDKGLQ 240
KLDCYPVGKW FCNKRCEQIC LGIHQLLAKP VMVGIDNLTW TLLKYVKPDD FDSDAAKDEF 300
VLETYSKLDV ALDVMHECFE PVEEPYTRRD LMEDVIFNRW SELNRLNFQG FYTVLLERND 360
EVITVATVRI YGEKVAEVPL VATRFQYRRL GMCCILMNEL EKKLMELGVE RLVLPAAPAV 420
LNTWTTSFGF TMVKESQKLN FLNYTFLDFQ GTVMCQKLLQ NIPPEVSSES TGM 473
Nucleotide Sequence
(Fasta)		ATGTTGAAAG AAGGAAAATC CAGATCTTCA AGAACAGTAG TAGATGGTAC AGAATCTCAG 60
TCTTCAGCTC GTCAGTTGCG ATCAAGTAAA AGAGCTCGGC AGGCAACAGT TTCTTCTTCC 120
TTGCATCATA CACCTCGAAC AGTTTTATCT TGGTTGATTG ACAATAATGT GGTTCTGCCC 180
CGTGCCAAAG TGCAATATCG TGTGAAAAAA GATGGTCGTC CAATGGCAGA AGGGCAGATC 240
ACTCGTGCAG GGATCAAATG CAAGTGCTGC CAAAAAGTTT ATGGAATTAG CAATTTTGAG 300
GTGCATGCTG GAAGCAGTTA TCACAGACCT TCAGCAAATA TATTTTTGGA AGATGGACGA 360
TCCCTTCTTG ATTGTCAACT GCAGATGAAA GAAAAGAGTA TTGTAAGAAA CACGAGGAAG 420
AGATCACCTT TGTTGAAGAA GCACAGCCAT TTGGGCACAA ATGACAATGT GTGTTCTGTG 480
TGCCATTACG GTGGTGAATT ACTTCTGTGT GATGAATGCC CATCTTCCTT TCATACTGGT 540
TGCCTTGGAA TGAAGGAGGT TCCCGATGGC GAGTGGTTTT GCCCATCATG CTGTTGTGAA 600
ATGTGTGGCG AGAGCAGATT TGATAAAAAC AAAGACCACT TTACAGAAAG CAGTCTACTT 660
ATCTGTTGTC AGTGTGAGCA CAAGTATCAT GCTCGGTGCG TGAGAGATAA GGGTCTTCAA 720
AAGCTGGATT GTTATCCTGT AGGAAAATGG TTTTGCAATA AGAGATGTGA GCAGATATGT 780
TTGGGTATCC ACCAACTCTT GGCAAAGCCA GTTATGGTGG GAATTGATAA CCTCACTTGG 840
ACTTTATTGA AATACGTAAA ACCTGATGAT TTTGATTCGG ATGCTGCTAA AGATGAGTTC 900
GTCTTGGAGA CTTATAGTAA ACTTGATGTC GCTTTGGATG TGATGCATGA GTGCTTTGAG 960
CCTGTCGAAG AACCTTACAC AAGGAGGGAT CTTATGGAAG ATGTTATCTT TAATAGATGG 1020
TCAGAGCTGA ATCGCTTAAA TTTTCAGGGT TTCTATACTG TGCTTCTGGA AAGAAATGAT 1080
GAAGTGATTA CAGTAGCGAC TGTGAGGATT TATGGAGAAA AGGTAGCTGA GGTTCCTCTT 1140
GTGGCAACAA GATTTCAGTA CCGCAGACTT GGAATGTGTT GCATCTTAAT GAATGAGCTT 1200
GAAAAGAAAC TAATGGAATT AGGAGTTGAG AGGCTAGTTT TGCCTGCTGC CCCCGCCGTG 1260
CTAAACACAT GGACCACTTC ATTTGGTTTC ACAATGGTGA AAGAATCTCA GAAGCTAAAC 1320
TTCTTGAATT ACACTTTCCT TGATTTCCAG GGTACAGTAA TGTGTCAGAA ACTCCTCCAG 1380
AATATCCCTC CAGAGGTATC AAGTGAATCA ACAGGTATGT AA 1423
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0044 Solyc03g071550.1.1 Solanum lycopersicum 97 0.0 931
WERAM-Prp-0127 EMJ08257 Prunus persica 63 2e-165 579
WERAM-Glm-0132 GLYMA11G27510.1 Glycine max 58 5e-149 525
WERAM-Met-0133 AES98667 Medicago truncatula 57 6e-143 504
WERAM-Thc-0093 EOY15722 Theobroma cacao 55 6e-137 484
WERAM-Arl-0028 fgenesh1_pg.C_scaffold_8001866 Arabidopsis lyrata 52 1e-136 483
WERAM-Pot-0028 POPTR_0002s11940.1 Populus trichocarpa 54 1e-128 457
WERAM-Amt-0093 ERN04860 Amborella trichopoda 50 2e-124 443
WERAM-Tra-0147 Traes_4BL_F428A5CDC.1 Triticum aestivum 47 5e-114 409
WERAM-Mua-0147 GSMUA_AchrUn_randomP01500_001 Musa acuminata 47 6e-113 405
WERAM-Tru-0037 TRIUR3_18780-P1 Triticum urartu 46 1e-111 400
WERAM-Aet-0069 EMT23788 Aegilops tauschii 46 4e-111 399
WERAM-Sei-0136 Si038769m Setaria italica 47 3e-109 393
WERAM-Sob-0012 Sb01g038485.1 Sorghum bicolor 46 1e-108 390
WERAM-Sem-0001 EFJ24916 Selaginella moellendorffii 42 1e-93 341
WERAM-Viv-0120 VIT_19s0014g01500.t01 Vitis vinifera 41 3e-88 323
WERAM-Php-0118 PP1S59_348V6.1 Physcomitrella patens 34 4e-83 306
WERAM-Orm-0079 OMERI07G23850.1 Oryza meridionalis 38 4e-80 296
WERAM-Zem-0139 GRMZM2G434715_P01 Zea mays 37 4e-79 292
WERAM-Orb-0084 OBART07G27320.1 Oryza barthii 39 2e-78 290
WERAM-Org-0083 ORGLA07G0217500.1 Oryza glaberrima 38 4e-78 289
WERAM-Orgl-0081 OGLUM07G27340.1 Oryza glumaepatula 39 2e-77 286
WERAM-Orbr-0080 OB07G13580.1 Oryza brachyantha 40 4e-77 286
WERAM-Orp-0069 OPUNC07G04530.3 Oryza punctata 40 5e-77 285
WERAM-Orr-0087 ORUFI07G28300.1 Oryza rufipogon 39 8e-77 285
WERAM-Brd-0130 BRADI5G27517.1 Brachypodium distachyon 36 9e-76 281
WERAM-Ori-0082 BGIOSGA025231-PA Oryza indica 39 2e-75 280
WERAM-Art-0071 AT3G14980.1 Arabidopsis thaliana 38 2e-75 280
WERAM-Orni-0071 ONIVA07G03330.1 Oryza nivara 40 2e-75 280
WERAM-Orl-0111 KN542919.1_FGP001 Oryza longistaminata 40 3e-75 280
WERAM-Brr-0136 Bra027290.1-P Brassica rapa 37 8e-75 278
WERAM-Bro-0088 Bo5g005570.1 Brassica oleracea 37 2e-74 277
WERAM-Lep-0071 LPERR07G04130.1 Leersia perrieri 39 9e-74 275
WERAM-Hov-0086 MLOC_65889.1 Hordeum vulgare 37 4e-73 273
WERAM-Ors-0046 OS04T0691700-01 Oryza sativa 38 8e-59 225
WERAM-Cym-0028 CMR472CT Cyanidioschyzon merolae 41 5e-13 73.6
WERAM-Cae-0002 T14G8.1 Caenorhabditis elegans 26 2e-11 67.8
WERAM-Orla-0187 ENSORLP00000021515.1 Oryzias latipes 53 6e-11 66.2
WERAM-Pof-0104 ENSPFOP00000009594.2 Poecilia formosa 33 1e-10 65.5
WERAM-Xim-0007 ENSXMAP00000001083.1 Xiphophorus maculatus 33 1e-10 65.5
WERAM-Ten-0050 ENSTNIP00000006981.1 Tetraodon nigroviridis 34 1e-10 65.5
WERAM-Orn-0079 ENSONIP00000008816.1 Oreochromis niloticus 33 1e-10 65.1
WERAM-Caj-0001 ENSCJAP00000000208.2 Callithrix jacchus 48 2e-10 65.1
WERAM-Dar-0054 ENSDARP00000127601.1 Danio rerio 59 2e-10 65.1
WERAM-Leo-0071 ENSLOCP00000009062.1 Lepisosteus oculatus 33 2e-10 64.7
WERAM-Asm-0115 ENSAMXP00000011496.1 Astyanax mexicanus 59 2e-10 64.7
WERAM-Tar-0001 ENSTRUP00000000282.1 Takifugu rubripes 59 2e-10 64.7
WERAM-Gaa-0200 ENSGACP00000024737.1 Gasterosteus aculeatus 59 2e-10 64.3
WERAM-Anc-0062 ENSACAP00000006236.3 Anolis carolinensis 59 2e-10 64.3
WERAM-Meg-0141 ENSMGAP00000014906.2 Meleagris gallopavo 59 2e-10 64.3
WERAM-Gaga-0128 ENSGALP00000023294.4 Gallus gallus 59 2e-10 64.3
Created Date 25-Jun-2016