WERAM Information

Tag Content
WERAM ID WERAM-Zem-0036
Ensembl Protein ID GRMZM2G047316_P01
Gene Name ALF19 LOC100283842
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GRMZM2G047316 GRMZM2G047316_T01 GRMZM2G047316_P01
GRMZM2G047316 GRMZM2G047316_T02 GRMZM2G047316_P02
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.10e-10 43.1 186 235
Organism Zea mays
Domain Profile
  Me_Reader PHD
            PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                        t+C  C+  ++ +++++ Cd C++wfH+kCv ++  ++++ k++ Cp C 
  GRMZM2G047316_P01 186 TLCGSCSGLYNSSEFWIGCDICERWFHGKCVRITPAKAEQIKHYKCPDCS 235
                        78****888888889*******************555554489******7 PP
Protein Sequence
(Fasta)		MAGPVSSAPR TVEDIYKDYA ARRAGLVRAL TSDVDGFYSM CDPEKENLCL YGLPNGGWEV 60
SLPVEEVPPE MPEPALGINF ARDGMRRRDW LSLVAVHSDA WLVSVAFFFA AKLNGNDRKR 120
LFNMINDHPS VYEIMADRKG RENNPGVDNS SKSRHSTKRS NDGKIKNSRV AVGECRYEND 180
EDHSETLCGS CSGLYNSSEF WIGCDICERW FHGKCVRITP AKAEQIKHYK CPDCSYKKSR 240
Q 241
Nucleotide Sequence
(Fasta)		ATGACGGGCG GTGTCAGACC TCTGACCAGA ACCAGAACCA GAACCCCCCC GCTGCGCAAC 60
CGGAGGCGTC TCCCAGCCCC GCGCCGCCGC TGACGGAGAT GGCCGGCCCC GTCTCCTCAG 120
CGCCCCGGAC CGTCGAGGAC ATCTACAAGG ACTACGCCGC CCGCCGCGCC GGCCTCGTCC 180
GCGCTCTCAC ATCTGATGTC GACGGGTTCT ACAGCATGTG CGACCCAGAG AAGGAGAACC 240
TGTGCCTGTA CGGTCTCCCG AACGGCGGCT GGGAGGTATC GCTGCCGGTG GAGGAGGTGC 300
CGCCGGAGAT GCCCGAACCA GCGCTCGGGA TCAACTTCGC CAGGGACGGC ATGAGGCGTC 360
GCGACTGGCT CTCGCTCGTC GCCGTACACT CTGACGCTTG GCTCGTCTCC GTCGCATTCT 420
TCTTCGCCGC CAAACTCAAC GGCAACGACA GGAAGCGATT ATTCAACATG ATTAATGATC 480
ATCCATCTGT GTATGAAATA ATGGCTGACC GGAAGGGAAG GGAGAATAAT CCTGGTGTTG 540
ATAACAGCAG CAAATCCAGG CACTCAACGA AGCGATCAAA TGATGGAAAG ATAAAGAACT 600
CAAGAGTGGC AGTTGGTGAA TGTAGGTATG AGAATGATGA AGACCACAGC GAAACCCTTT 660
GTGGTTCTTG CAGTGGTCTC TACAACTCAA GTGAGTTCTG GATTGGATGC GACATTTGTG 720
AGCGGTGGTT CCACGGCAAA TGTGTGAGGA TAACCCCAGC AAAAGCAGAA CAGATAAAGC 780
ACTACAAGTG CCCTGATTGC AGCTACAAAA AGAGCAGGCA ATAAAATCTT GGAGCTGCTG 840
GCCTCCTATT ACTGACTCAG CTGATCAACC AAACAATACT TTTCAATTTG GCCGTAGATG 900
TTAACTACCC TAGGCATTTC TTTGTTGTGG TACATGCTGG AAAAAGACAT ACAGGATAGT 960
TGATCTTACA GTCTGGTCAA TTGCTTTTGT GCTTGTTTTA ATGACATCTG TTTACGGGTT 1020
ATGTCTTCAA GGTGGATGGT AATCCTTTGC GTTGTGGGCT CTAGCAACGT GATGAGTTAT 1080
GGCCATTATC GAAATTTGAG ATTTGCGCGA GTGCGCATCT GAAGGTAGTC AAGTTGATTT 1140
GTTTCCTCAA AATTAGTAAA TTAAGTAATA AAACATAGAG AAATAATTAA AGAATACAAT 1200
C 1202
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sob-0020 Sb02g006980.1 Sorghum bicolor 91 9e-118 419
WERAM-Sei-0119 Si030965m Setaria italica 85 5e-109 390
WERAM-Lep-0074 LPERR07G06880.1 Leersia perrieri 77 6e-99 357
WERAM-Ors-0066 OS07T0233300-01 Oryza sativa 77 7e-97 350
WERAM-Orr-0075 ORUFI07G08080.1 Oryza rufipogon 77 7e-97 350
WERAM-Ori-0080 BGIOSGA024567-PA Oryza indica 77 7e-97 350
WERAM-Orni-0073 ONIVA07G06790.1 Oryza nivara 77 1e-96 349
WERAM-Orm-0069 OMERI07G06560.1 Oryza meridionalis 76 2e-96 348
WERAM-Orgl-0051 OGLUM05G06240.1 Oryza glumaepatula 76 2e-96 348
WERAM-Org-0074 ORGLA07G0067800.1 Oryza glaberrima 76 2e-96 348
WERAM-Orp-0071 OPUNC07G07630.1 Oryza punctata 76 3e-96 348
WERAM-Brd-0027 BRADI1G53660.1 Brachypodium distachyon 74 3e-94 341
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 74 2e-93 338
WERAM-Orb-0041 OBART03G38930.1 Oryza barthii 74 5e-93 337
WERAM-Orbr-0082 OB07G15980.1 Oryza brachyantha 77 1e-92 336
WERAM-Mua-0107 GSMUA_Achr7P15530_001 Musa acuminata 68 2e-89 325
WERAM-Sol-0125 Solyc10g076690.1.1 Solanum lycopersicum 68 9e-86 313
WERAM-Glm-0003 GLYMA01G29950.1 Glycine max 67 2e-85 312
WERAM-Sot-0057 PGSC0003DMT400049364 Solanum tuberosum 68 2e-85 312
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 69 6e-85 310
WERAM-Prp-0085 EMJ19499 Prunus persica 66 3e-84 308
WERAM-Thc-0059 EOY07191 Theobroma cacao 67 2e-83 305
WERAM-Pot-0155 POPTR_0016s12420.1 Populus trichocarpa 67 3e-83 305
WERAM-Amt-0010 ERN05231 Amborella trichopoda 66 1e-82 303
WERAM-Met-0092 KEH28874 Medicago truncatula 67 1e-80 296
WERAM-Brr-0166 Bra034169.1-P Brassica rapa 63 2e-77 285
WERAM-Arl-0100 fgenesh2_kg.6__ 497__ AT5G05610.2 Arabidopsis lyrata 63 3e-77 285
WERAM-Bro-0019 Bo1g141160.1 Brassica oleracea 63 4e-77 284
WERAM-Art-0117 AT5G05610.2 Arabidopsis thaliana 63 1e-76 283
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 63 2e-76 282
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 63 3e-76 281
WERAM-Aet-0107 EMT22745 Aegilops tauschii 70 5e-74 274
WERAM-Tru-0043 TRIUR3_20050-P1 Triticum urartu 71 2e-72 269
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 56 8e-71 263
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 57 2e-69 259
Created Date 25-Jun-2016