WERAM Information

Tag Content
WERAM ID WERAM-Sus-0105
Ensembl Protein ID ENSSSCP00000015146.2
Gene Name PRDM6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSSCG00000014238.2 ENSSSCT00000015558.2 ENSSSCP00000015146.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 2.10e-32 112 241 359
Organism Sus scrofa
Domain Profile
  HMT RIZ
               RIZ.txt   2 evelaessipkeglgvyakkkiekgekfGPfvGekkileeve..enanekliweisedkgevkyivDasdeeksnWlryvnvArskeeq 88 
                           ev l++s++p+   g+ a+++i++g+ +GPf G    +e+v+  +  n++ +wei++++g+ ++++D+ +++ks+W+ry+++Ar + eq
  ENSSSCP00000015146.2 241 EVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLPPEKVQagVVRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYIRCARHCGEQ 329
                           6789*******************************999998833578999*************************************** PP
               RIZ.txt  89 NLaalqineqifYktikdIepdeELLvwyk 118
                           NL+++q+ ++ifY+++ dI+ ++ELLvwy+
  ENSSSCP00000015146.2 330 NLTVVQYRSNIFYRACIDIPRGTELLVWYN 359
                           *****************************6 PP
Protein Sequence
(Fasta)		MLKPGDPGGS AFLKVDPAYL QHWQQLFPHS SGGPLKSGGA VGPLGAPQPL QPPPPQERAE 60
APPDSLRPRP SSLSSASSTP ASSSTSASSA SSCAAAAAAA AALAGLSALP VAQLPVFAPL 120
AAAAVAAEPL PPKDLCLGAA SGPGPSKCGG GGDGRGAPRF RCSAEELDYY LYGQQRMEII 180
PLNQHTSDPN NRCDMCADNR NGECPMHGPL HSLRRLVGTS SAAAAAPPPE LPEWLRDLPR 240
EVCLCTSTVP GLAYGICAAQ RIQQGTWIGP FQGVLLPPEK VQAGVVRNTQ HLWEIYDQDG 300
TLQHFIDGGE PSKSSWMRYI RCARHCGEQN LTVVQYRSNI FYRACIDIPR GTELLVWYND 360
SYTSFFGIPL QCIAQDENSN IVPLKLSKCL CRVKEISCFK RSSKASSVNR MRNLVSPPQP 420
HGRNFSLLDK SGPIESGFNQ INVKNQRVLA SPTSTSQLHS EFSDWHLWKC GQCFKTFTQR 480
ILLQMHVCTQ NPDRPYQCGH CSQSFSQPSE LRNHVVTHSS DRPFKCGYCG RAFAGATTLN 540
NHIRTHTGEK PFKCERCERS FTQATQLSRH QRMPNECKPI TESPESIEVD
Nucleotide Sequence
(Fasta)		ATGCTGAAGC CCGGAGACCC CGGCGGATCG GCTTTTCTCA AAGTGGACCC AGCTTATTTG 60
CAGCACTGGC AGCAACTCTT CCCGCACAGC AGCGGCGGCC CGCTCAAGAG CGGCGGCGCC 120
GTGGGTCCCC TGGGCGCGCC GCAACCTCTC CAGCCGCCGC CGCCACAGGA GCGCGCCGAG 180
GCCCCGCCGG ACAGCCTGCG TCCGCGGCCC TCCTCGCTCT CCTCCGCCTC CTCCACTCCA 240
GCTTCCTCCT CCACCTCGGC CTCGTCCGCC TCCTCCTGCG CTGCTGCCGC CGCCGCCGCC 300
GCGGCGCTGG CTGGTCTCTC GGCCCTGCCC GTGGCTCAGC TGCCGGTGTT CGCGCCTCTG 360
GCCGCCGCCG CCGTCGCCGC GGAGCCGCTG CCCCCCAAGG ACCTGTGCCT CGGCGCCGCC 420
TCGGGCCCGG GGCCCTCCAA GTGTGGCGGC GGCGGGGACG GTCGGGGCGC CCCACGCTTC 480
CGCTGCAGCG CGGAGGAGCT GGACTATTAC CTGTACGGCC AGCAGCGCAT GGAGATCATC 540
CCGCTCAACC AGCACACCAG CGACCCCAAC AACCGTTGCG ACATGTGTGC GGATAACCGC 600
AACGGCGAGT GCCCCATGCA CGGGCCGCTG CACTCGCTGC GCCGGCTCGT GGGCACCAGC 660
AGCGCCGCGG CCGCCGCGCC CCCGCCGGAG CTGCCGGAGT GGCTTCGGGA CCTGCCGCGG 720
GAAGTGTGCC TGTGCACCAG CACCGTGCCC GGCCTAGCCT ACGGCATCTG CGCGGCTCAG 780
AGGATCCAGC AGGGCACCTG GATCGGGCCC TTCCAGGGCG TGCTTCTGCC CCCGGAGAAG 840
GTGCAGGCTG GCGTCGTAAG GAACACGCAG CATCTCTGGG AGATATATGA CCAAGATGGG 900
ACACTACAGC ACTTTATTGA TGGTGGGGAA CCTAGTAAGT CGAGCTGGAT GAGGTATATC 960
CGATGTGCAA GGCACTGCGG AGAACAGAAT CTAACAGTAG TTCAGTACAG GTCGAATATA 1020
TTCTACCGAG CCTGTATAGA TATTCCCAGG GGTACCGAGC TTCTGGTGTG GTACAATGAC 1080
AGCTATACGT CTTTCTTTGG GATCCCCTTA CAATGCATTG CCCAGGATGA AAACTCTAAC 1140
ATTGTTCCTT TAAAATTGTC CAAGTGTCTC TGTAGAGTAA AAGAGATCTC TTGCTTTAAA 1200
AGATCATCGA AAGCCTCTTC TGTCAATAGG ATGAGAAATC TAGTGTCGCC TCCCCAGCCC 1260
CACGGGAGGA ACTTCTCCCT CCTGGATAAG TCTGGGCCCA TCGAATCAGG ATTTAACCAG 1320
ATCAACGTGA AAAACCAGCG AGTCCTGGCG AGCCCGACCT CCACCAGCCA GCTCCACTCC 1380
GAGTTCAGTG ACTGGCATCT CTGGAAATGC GGGCAGTGCT TTAAGACTTT CACGCAGCGG 1440
ATCCTCTTAC AGATGCACGT GTGCACACAG AACCCTGACA GACCTTACCA GTGCGGCCAC 1500
TGCTCCCAGT CCTTTTCCCA ACCTTCAGAA CTGAGGAACC ACGTGGTCAC GCACTCCAGT 1560
GACCGGCCTT TCAAATGCGG CTACTGTGGT CGTGCCTTTG CCGGCGCCAC CACCCTCAAC 1620
AACCACATCC GAACCCACAC TGGAGAAAAG CCCTTCAAGT GCGAGAGGTG TGAGAGGAGC 1680
TTCACGCAGG CCACCCAGCT GAGCCGACAC CAACGGATGC CCAATGAGTG CAAGCCAATA 1740
ACCGAGAGCC CAGAATCAAT CGAAGTGGAT TAA 1774
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Loa-0003 ENSLAFP00000000335.4 Loxodonta africana 93 0.0 817
WERAM-Ova-0204 ENSOARP00000020272.1 Ovis aries 93 0.0 815
WERAM-Paa-0150 ENSPANP00000007800.1 Papio anubis 93 0.0 815
WERAM-Caf-0212 ENSCAFP00000031903.3 Canis familiaris 93 0.0 813
WERAM-Mum-0220 ENSMUSP00000089513.3 Mus musculus 92 0.0 810
WERAM-Ran-0169 ENSRNOP00000041369.3 Rattus norvegicus 92 0.0 808
WERAM-Aim-0176 ENSAMEP00000016566.1 Ailuropoda melanoleuca 92 0.0 806
WERAM-Tut-0079 ENSTTRP00000006439.1 Tursiops truncatus 92 0.0 806
WERAM-Sah-0097 ENSSHAP00000011079.1 Sarcophilus harrisii 92 0.0 803
WERAM-Mod-0115 ENSMODP00000016775.4 Monodelphis domestica 91 0.0 800
WERAM-Gaga-0057 ENSGALP00000008574.4 Gallus gallus 91 0.0 799
WERAM-Fia-0094 ENSFALP00000007850.1 Ficedula albicollis 90 0.0 790
WERAM-Mae-0109 ENSMEUP00000010466.1 Macropus eugenii 90 0.0 783
WERAM-Anc-0027 ENSACAP00000003308.3 Anolis carolinensis 87 0.0 780
WERAM-Pes-0066 ENSPSIP00000008417.1 Pelodiscus sinensis 90 0.0 756
WERAM-Caj-0182 ENSCJAP00000031870.2 Callithrix jacchus 92 0.0 743
WERAM-Eqc-0022 ENSECAP00000003259.1 Equus caballus 92 0.0 741
WERAM-Ocp-0043 ENSOPRP00000003686.1 Ochotona princeps 91 0.0 740
WERAM-Mim-0073 ENSMICP00000007053.1 Microcebus murinus 92 0.0 738
WERAM-Myl-0113 ENSMLUP00000009157.2 Myotis lucifugus 91 0.0 733
WERAM-Tag-0018 ENSTGUP00000001146.1 Taeniopygia guttata 89 0.0 723
WERAM-Orn-0168 ENSONIP00000017375.1 Oreochromis niloticus 79 0.0 716
WERAM-Soa-0070 ENSSARP00000006897.1 Sorex araneus 76 8e-167 584
WERAM-Pof-0242 ENSPFOP00000019968.2 Poecilia formosa 33 1e-35 149
WERAM-Orla-0193 ENSORLP00000021967.1 Oryzias latipes 34 5e-35 146
WERAM-Poa-0186 ENSPPYP00000022077.1 Pongo abelii 33 2e-34 144
WERAM-Xim-0064 ENSXMAP00000005547.1 Xiphophorus maculatus 34 2e-34 144
WERAM-Pat-0178 ENSPTRP00000036745.1 Pan troglodytes 33 3e-34 144
WERAM-Hos-0119 ENSP00000253008.2 Homo sapiens 33 3e-34 144
WERAM-Chs-0179 ENSCSAP00000010875.1 Chlorocebus sabaeus 33 3e-34 144
WERAM-Otg-0085 ENSOGAP00000006760.2 Otolemur garnettii 33 3e-34 144
WERAM-Orc-0078 ENSOCUP00000007120.2 Oryctolagus cuniculus 33 4e-34 143
WERAM-Ict-0060 ENSSTOP00000005349.2 Ictidomys tridecemlineatus 33 4e-34 143
WERAM-Ptv-0010 ENSPVAP00000001423.1 Pteropus vampyrus 33 4e-34 143
WERAM-Dar-0018 ENSDARP00000015394.5 Danio rerio 34 6e-34 143
WERAM-Meg-0059 ENSMGAP00000005346.1 Meleagris gallopavo 33 6e-34 142
WERAM-Gog-0123 ENSGGOP00000010306.2 Gorilla gorilla 34 6e-34 142
WERAM-Anp-0104 ENSAPLP00000012181.1 Anas platyrhynchos 33 9e-34 142
WERAM-Dan-0173 ENSDNOP00000030867.1 Dasypus novemcinctus 33 1e-33 142
WERAM-Bot-0192 ENSBTAP00000032579.2 Bos taurus 33 1e-33 142
WERAM-Gam-0121 ENSGMOP00000012620.1 Gadus morhua 33 1e-33 142
WERAM-Lac-0168 ENSLACP00000019977.1 Latimeria chalumnae 33 1e-33 141
WERAM-Tar-0225 ENSTRUP00000047797.1 Takifugu rubripes 34 2e-33 141
WERAM-Asm-0083 ENSAMXP00000008799.1 Astyanax mexicanus 35 4e-33 140
WERAM-Gaa-0177 ENSGACP00000022065.1 Gasterosteus aculeatus 33 6e-33 139
WERAM-Fec-0217 ENSFCAP00000016661.1 Felis catus 33 7e-33 139
WERAM-Cap-0072 ENSCPOP00000005323.2 Cavia porcellus 33 1e-32 138
WERAM-Mup-0081 ENSMPUP00000007423.1 Mustela putorius furo 27 2e-32 137
WERAM-Ten-0104 ENSTNIP00000011876.1 Tetraodon nigroviridis 46 3e-31 134
WERAM-Dio-0007 ENSDORP00000000987.1 Dipodomys ordii 28 4e-31 133
WERAM-Nol-0140 ENSNLEP00000015220.1 Nomascus leucogenys 43 1e-30 132
WERAM-Leo-0047 ENSLOCP00000006545.1 Lepisosteus oculatus 44 1e-30 132
WERAM-Ect-0066 ENSETEP00000007192.1 Echinops telfairi 45 1e-30 131
WERAM-Xet-0008 ENSXETP00000002850.3 Xenopus tropicalis 45 5e-29 127
WERAM-Tub-0069 ENSTBEP00000008639.1 Tupaia belangeri 27 9e-29 125
WERAM-Chh-0045 ENSCHOP00000005073.1 Choloepus hoffmanni 30 2e-28 125
WERAM-Mam-0029 ENSMMUP00000005026.2 Macaca mulatta 27 2e-26 118
WERAM-Ora-0122 ENSOANP00000023793.3 Ornithorhynchus anatinus 26 3e-23 107
WERAM-Vip-0075 ENSVPAP00000006917.1 Vicugna pacos 26 2e-20 98.6
WERAM-Prc-0123 ENSPCAP00000010913.1 Procavia capensis 28 4e-20 97.1
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 34 5e-19 93.6
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 37 6e-19 93.2
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 28 9e-18 89.4
Created Date 25-Jun-2016