WERAM Information

Tag Content
WERAM ID WERAM-Ran-0247
Ensembl Protein ID ENSRNOP00000069719.1
Gene Name Kdm5c
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000057706.1 ENSRNOT00000086952.1 ENSRNOP00000069719.1
ENSRNOG00000057706.1 ENSRNOT00000082902.1 ENSRNOP00000070936.1
ENSRNOG00000057706.1 ENSRNOT00000079909.1 ENSRNOP00000071836.1
ENSRNOG00000057706.1 ENSRNOT00000087945.1 ENSRNOP00000072650.1
ENSRNOG00000057706.1 ENSRNOT00000077528.1 ENSRNOP00000074157.1
ENSRNOG00000057706.1 ENSRNOT00000082725.1 ENSRNOP00000074522.1
ENSRNOG00000057706.1 ENSRNOT00000078617.1 ENSRNOP00000075375.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JARID 4.60e-104 346 401 567
Me_Reader PHD 1.60e-12 47.9 259 305
Organism Rattus norvegicus
Domain Profile
  HDM JARID
             JARID.txt   1 eyaesgwnlnnlpvleesvlahinadisgvkvpwlyvgmcfsafcwhvedhwsysinylhfgepkvwygvpgsaaekleevlkklapel 89 
                           eya+sgwnln++pvle+svl+hinadisg+kvpwlyvgm+fsafcwh+edhwsysinylh+gepk+wygvp+ aae+leev+kkl+pel
  ENSRNOP00000069719.1 401 EYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPEL 489
                           7**************************************************************************************** PP
             JARID.txt  90 fesqpdllhqlvtllnpnilkeegvpvyrtnqkagefvitfprayhsgfnqgfnfaeavnfatvdwlaagreavesys 167
                           f+sqpdllhqlvtl+npn+l+++gvpv+rtnq+agefvitfprayhsgfnqg+nfaeavnf+t+dwl+agr+++e+y+
  ENSRNOP00000069719.1 490 FDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYR 567
                           *****************************************************************************7 PP
  Me_Reader PHD
               PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                           +C++C++ de++k ++ Cd+Cdd +H+ C+ +pl ++p+g  w+Cp+C+
  ENSRNOP00000069719.1 259 VCRMCSRGDEDDK-LLLCDGCDDNYHIFCLLPPLPEIPKG-VWRCPKCV 305
                           8****77777776.**************************.*******7 PP
Protein Sequence
(Fasta)		MELGSDDFLP PPECPVFEPS WAEFRDPLGY IAKIRPIAEK SGICKIRPPA IVVEEGGYET 60
ICKDRRWARV AQRLNYPPGK NIGSLLRSHY ERIVYPYEMY QSGANLVQCN TRPFDNEEKD 120
KEYKPHSIPL RQSVQPSKFN SYGRRAKRLQ PDPEPTEEDI EKNPELKKLQ IYGAGPKMMG 180
LGLMAKDKNL RKKDKEGPEC PPTVGGKEEL GGEWKMESAS PKTFLEGKEE LSHSPEPCTK 240
MTMRLRRNHS NAQFIESYVC RMCSRGDEDD KLLLCDGCDD NYHIFCLLPP LPEIPKGVWR 300
CPKCVMAECK RPPEAFGFEQ ATREYTLQSF GEMADSFKAD YFNMPVHMVP TELVEKEFWR 360
LVNSIEEDVT VEYGADIHSK EFGSGFPVSD SKRHLTPEEE EYATSGWNLN VMPVLEQSVL 420
CHINADISGM KVPWLYVGMV FSAFCWHIED HWSYSINYLH WGEPKTWYGV PSLAAEHLEE 480
VMKKLTPELF DSQPDLLHQL VTLMNPNTLM SHGVPVVRTN QCAGEFVITF PRAYHSGFNQ 540
GYNFAEAVNF CTADWLPAGR QCIEHYRRLR RYCVFSHEEL ICKMAACPEK LDLNLAAAVH 600
KEMFIMVQEE RRLRKALLEK V 621
Nucleotide Sequence
(Fasta)		AAACCAAGAT GGCGGTGGCA GCGATGAAAC CTGCGGCGAC TGGCACTTAC CTGTAGTAGT 60
GAAGGCTTCA ATAGTTGGGA GGCAGCGGTA GGGTTTGGAA GAAACGGAAC AAGACTAAGA 120
ACCGGTAATC GGAATCTCAG CCTGAGACTT TTAGAGCACG GCACCCGCCC CCCAAGCCCT 180
TGACGGGCGG TGGCCGTCCT GCTTAGGGCC TAGACTCTGA GAAGTGCATC GGTTTCAGAC 240
AGCGGCGGCG CCATGAGTCC TTAAGGGCGG CCTGAGCCCT CCGGATCTCT GGCCCAGCCC 300
TCGGGCCCAC CATGGAGCTG GGGTCCGACG ATTTCCTACC GCCGCCGGAG TGTCCGGTGT 360
TCGAGCCTAG CTGGGCCGAG TTCCGAGACC CTCTAGGCTA CATCGCGAAA ATCAGACCCA 420
TCGCCGAGAA GTCCGGCATT TGCAAGATCC GCCCACCCGC GATTGTGGTG GAAGAAGGTG 480
GTTATGAAAC TATCTGCAAG GACCGTCGAT GGGCCCGTGT GGCCCAGCGC CTCAACTATC 540
CACCTGGCAA AAACATTGGT TCCTTGCTAC GCTCTCACTA TGAACGTATT GTTTATCCCT 600
ATGAAATGTA CCAGTCTGGA GCCAACCTTG TGCAGTGTAA CACACGCCCA TTTGATAATG 660
AGGAAAAGGA CAAGGAATAT AAACCCCACA GCATCCCCCT TCGACAGTCT GTGCAGCCTT 720
CCAAGTTCAA CAGTTATGGA CGACGGGCAA AGAGACTACA GCCAGATCCG GAACCCACAG 780
AGGAAGACAT TGAAAAGAAT CCAGAATTGA AGAAGCTACA GATATATGGA GCAGGTCCCA 840
AGATGATGGG ACTGGGCCTG ATGGCCAAGG ATAAGAATCT GCGGAAAAAA GATAAAGAAG 900
GGCCTGAGTG TCCCCCCACT GTGGGGGGGA AGGAGGAATT AGGGGGGGAG TGGAAGATGG 960
AGTCAGCCTC ACCCAAGACT TTCCTAGAAG GCAAGGAGGA ACTGAGTCAC AGCCCTGAGC 1020
CCTGCACCAA GATGACCATG AGACTACGAA GGAACCACAG CAATGCCCAG TTTATTGAGT 1080
CATATGTATG CCGAATGTGT TCCCGAGGAG ATGAAGATGA CAAACTCTTA CTGTGTGATG 1140
GCTGTGATGA CAATTACCAC ATCTTTTGCC TGCTGCCTCC TTTGCCTGAA ATCCCGAAAG 1200
GTGTCTGGAG GTGTCCAAAG TGTGTCATGG CGGAGTGTAA GCGGCCCCCT GAAGCCTTTG 1260
GCTTTGAGCA AGCTACCCGG GAATATACTC TTCAGAGCTT TGGAGAGATG GCTGACTCCT 1320
TTAAAGCAGA CTACTTCAAC ATGCCTGTGC ATATGGTACC CACAGAACTT GTAGAGAAGG 1380
AGTTCTGGCG GCTGGTGAAT AGCATCGAGG AAGACGTAAC TGTGGAGTAT GGGGCTGACA 1440
TCCATTCCAA AGAATTTGGC AGCGGTTTCC CTGTCAGTGA CAGTAAGCGG CACCTAACCC 1500
CAGAGGAGGA GGAGTATGCC ACAAGTGGCT GGAACCTGAA TGTGATGCCT GTGTTGGAGC 1560
AGTCTGTACT GTGCCACATC AATGCAGATA TATCTGGCAT GAAGGTACCA TGGCTGTATG 1620
TGGGAATGGT CTTCTCAGCC TTTTGCTGGC ATATCGAGGA TCATTGGAGT TACTCTATTA 1680
ACTACCTCCA CTGGGGAGAG CCAAAAACCT GGTATGGAGT CCCATCGCTT GCAGCAGAAC 1740
ACTTGGAAGA AGTGATGAAG AAGCTGACAC CAGAGCTTTT TGATAGCCAG CCTGATCTCC 1800
TTCACCAACT TGTTACTCTC ATGAATCCTA ACACACTCAT GTCCCATGGT GTGCCGGTTG 1860
TTCGCACAAA CCAGTGTGCA GGAGAATTTG TCATCACTTT TCCTCGTGCT TACCACAGTG 1920
GTTTCAACCA AGGCTACAAC TTTGCTGAAG CAGTCAACTT TTGCACTGCT GACTGGCTGC 1980
CTGCTGGACG CCAGTGCATT GAGCACTACC GACGACTACG AAGATACTGT GTCTTTTCTC 2040
ATGAGGAGCT CATTTGCAAG ATGGCTGCCT GCCCTGAGAA GCTGGACCTG AACCTGGCAG 2100
CAGCTGTACA TAAGGAGATG TTCATTATGG TGCAGGAGGA GCGGCGTCTA CGAAAGGCTC 2160
TGTTGGAAAA GGTAA 2176
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Caj-0062 ENSCJAP00000010885.1 Callithrix jacchus 98 0.0 1237
WERAM-Sus-0088 ENSSSCP00000013112.2 Sus scrofa 94 0.0 1229
WERAM-Mum-0069 ENSMUSP00000108203.1 Mus musculus 99 0.0 1152
WERAM-Otg-0056 ENSOGAP00000003880.2 Otolemur garnettii 98 0.0 1144
WERAM-Chs-0153 ENSCSAP00000008766.1 Chlorocebus sabaeus 98 0.0 1144
WERAM-Mam-0191 ENSMMUP00000027068.2 Macaca mulatta 98 0.0 1144
WERAM-Hos-0110 ENSP00000364550.3 Homo sapiens 98 0.0 1144
WERAM-Paa-0060 ENSPANP00000008466.1 Papio anubis 98 0.0 1143
WERAM-Gog-0089 ENSGGOP00000007521.2 Gorilla gorilla 98 0.0 1143
WERAM-Poa-0197 ENSPPYP00000022803.2 Pongo abelii 98 0.0 1142
WERAM-Vip-0044 ENSVPAP00000003974.1 Vicugna pacos 98 0.0 1142
WERAM-Nol-0172 ENSNLEP00000019325.2 Nomascus leucogenys 98 0.0 1142
WERAM-Bot-0140 ENSBTAP00000019893.5 Bos taurus 98 0.0 1141
WERAM-Aim-0061 ENSAMEP00000005475.1 Ailuropoda melanoleuca 98 0.0 1141
WERAM-Mup-0108 ENSMPUP00000009622.1 Mustela putorius furo 98 0.0 1140
WERAM-Ict-0017 ENSSTOP00000001099.2 Ictidomys tridecemlineatus 98 0.0 1140
WERAM-Tut-0063 ENSTTRP00000004859.1 Tursiops truncatus 98 0.0 1140
WERAM-Ova-0093 ENSOARP00000009606.1 Ovis aries 98 0.0 1140
WERAM-Myl-0054 ENSMLUP00000004559.2 Myotis lucifugus 98 0.0 1140
WERAM-Eqc-0209 ENSECAP00000022585.1 Equus caballus 98 0.0 1139
WERAM-Dan-0159 ENSDNOP00000027101.1 Dasypus novemcinctus 98 0.0 1139
WERAM-Caf-0167 ENSCAFP00000023835.3 Canis familiaris 98 0.0 1139
WERAM-Orc-0101 ENSOCUP00000008740.2 Oryctolagus cuniculus 98 0.0 1139
WERAM-Pat-0186 ENSPTRP00000038795.3 Pan troglodytes 98 0.0 1135
WERAM-Loa-0002 ENSLAFP00000000253.2 Loxodonta africana 98 0.0 1134
WERAM-Mim-0074 ENSMICP00000007161.1 Microcebus murinus 97 0.0 1123
WERAM-Ora-0111 ENSOANP00000021438.1 Ornithorhynchus anatinus 95 0.0 1114
WERAM-Sah-0049 ENSSHAP00000005524.1 Sarcophilus harrisii 96 0.0 1113
WERAM-Cap-0110 ENSCPOP00000008106.2 Cavia porcellus 96 0.0 1113
WERAM-Mae-0078 ENSMEUP00000007759.1 Macropus eugenii 95 0.0 1113
WERAM-Mod-0077 ENSMODP00000012203.3 Monodelphis domestica 83 0.0 1068
WERAM-Prc-0127 ENSPCAP00000011494.1 Procavia capensis 92 0.0 1060
WERAM-Anc-0043 ENSACAP00000004863.3 Anolis carolinensis 91 0.0 1056
WERAM-Ptv-0041 ENSPVAP00000004453.1 Pteropus vampyrus 98 0.0 1051
WERAM-Fec-0082 ENSFCAP00000006727.3 Felis catus 90 0.0 1016
WERAM-Lac-0120 ENSLACP00000014409.1 Latimeria chalumnae 83 0.0 968
WERAM-Xet-0049 ENSXETP00000015599.3 Xenopus tropicalis 76 0.0 954
WERAM-Anp-0124 ENSAPLP00000013805.1 Anas platyrhynchos 91 0.0 950
WERAM-Orn-0204 ENSONIP00000021218.1 Oreochromis niloticus 71 0.0 937
WERAM-Orla-0155 ENSORLP00000018006.1 Oryzias latipes 70 0.0 932
WERAM-Ten-0151 ENSTNIP00000000510.1 Tetraodon nigroviridis 79 0.0 929
WERAM-Gaa-0127 ENSGACP00000016095.1 Gasterosteus aculeatus 70 0.0 928
WERAM-Gam-0221 ENSGMOP00000021154.1 Gadus morhua 75 0.0 927
WERAM-Dio-0006 ENSDORP00000000973.1 Dipodomys ordii 83 0.0 921
WERAM-Dar-0014 ENSDARP00000110667.2 Danio rerio 67 0.0 913
WERAM-Xim-0221 ENSXMAP00000018338.1 Xiphophorus maculatus 69 0.0 909
WERAM-Pof-0028 ENSPFOP00000002786.2 Poecilia formosa 64 0.0 902
WERAM-Asm-0136 ENSAMXP00000013190.1 Astyanax mexicanus 67 0.0 885
WERAM-Ect-0085 ENSETEP00000009806.1 Echinops telfairi 82 0.0 847
WERAM-Tar-0003 ENSTRUP00000000685.1 Takifugu rubripes 63 0.0 825
WERAM-Pem-0023 ENSPMAP00000003298.1 Petromyzon marinus 66 0.0 783
WERAM-Ere-0114 ENSEEUP00000012051.1 Erinaceus europaeus 100 0.0 743
WERAM-Tub-0140 ENSTBEP00000015071.1 Tupaia belangeri 100 0.0 741
WERAM-Pes-0046 ENSPSIP00000007266.1 Pelodiscus sinensis 63 0.0 740
WERAM-Fia-0057 ENSFALP00000004074.1 Ficedula albicollis 62 0.0 734
WERAM-Gaga-0123 ENSGALP00000021168.4 Gallus gallus 62 0.0 733
WERAM-Tag-0155 ENSTGUP00000013014.1 Taeniopygia guttata 62 0.0 731
WERAM-Chh-0061 ENSCHOP00000006896.1 Choloepus hoffmanni 61 0.0 724
WERAM-Soa-0132 ENSSARP00000013044.1 Sorex araneus 61 0.0 708
WERAM-Leo-0177 ENSLOCP00000021020.1 Lepisosteus oculatus 62 0.0 702
WERAM-Meg-0012 ENSMGAP00000000890.1 Meleagris gallopavo 57 0.0 694
WERAM-Tas-0091 ENSTSYP00000009583.1 Tarsius syrichta 61 0.0 631
WERAM-Drm-0042 FBpp0311492 Drosophila melanogaster 51 8e-168 588
WERAM-Cii-0031 ENSCINP00000012442.3 Ciona intestinalis 54 5e-166 582
WERAM-Cis-0007 ENSCSAVP00000000871.1 Ciona savignyi 49 2e-165 579
WERAM-Ocp-0067 ENSOPRP00000005882.1 Ochotona princeps 54 1e-156 550
WERAM-Cae-0018 ZK593.4a Caenorhabditis elegans 50 2e-99 360
WERAM-Asni-0025 CADANGAP00007970 Aspergillus niger 38 2e-91 334
WERAM-Ast-0008 CADATEAP00004027 Aspergillus terreus 37 7e-90 328
WERAM-Spr-0023 CBQ72974 Sporisorium reilianum 35 9e-89 325
WERAM-Asfu-0009 CADAFUAP00002555 Aspergillus fumigatus 51 2e-88 324
WERAM-Sem-0145 EFJ09775 Selaginella moellendorffii 37 2e-88 323
WERAM-Coi-0029 EAS31076 Coccidioides immitis 51 2e-88 323
WERAM-Aso-0031 CADAORAP00009644 Aspergillus oryzae 50 1e-87 321
WERAM-Asf-0028 CADAFLAP00010689 Aspergillus flavus 50 1e-87 321
WERAM-Asc-0001 CADACLAP00000026 Aspergillus clavatus 51 7e-87 319
WERAM-Mao-0014 MGG_04878T0 Magnaporthe oryzae 49 1e-86 318
WERAM-Nec-0020 EFNCRP00000004299 Neurospora crassa 34 2e-86 317
WERAM-Asn-0018 CADANIAP00004258 Aspergillus nidulans 50 2e-86 317
WERAM-Usm-0016 UM02582P0 Ustilago maydis 33 3e-86 317
WERAM-Php-0053 PP1S235_2V6.1 Physcomitrella patens 45 4e-85 313
WERAM-Tum-0032 CAZ86330 Tuber melanosporum 44 4e-85 313
WERAM-Pyt-0008 EFQ94561 Pyrenophora teres 47 5e-85 313
WERAM-Lem-0001 CBY01560 Leptosphaeria maculans 46 5e-85 313
WERAM-Scs-0004 EDN96551 Sclerotinia sclerotiorum 49 5e-85 312
WERAM-Pytr-0035 EDU44093 Pyrenophora triticirepentis 46 9e-85 311
WERAM-Phn-0021 SNOT_11200 Phaeosphaeria nodorum 46 4e-84 309
WERAM-Trr-0012 EGR49606 Trichoderma reesei 47 7e-84 309
WERAM-Trv-0029 EHK20007 Trichoderma virens 47 1e-83 308
WERAM-Thc-0041 EOY24718 Theobroma cacao 46 5e-82 303
WERAM-Gag-0021 GGTG_06066T0 Gaeumannomyces graminis 48 1e-81 301
WERAM-Map-0012 MAPG_04048T0 Magnaporthe poae 47 1e-81 301
WERAM-Zyt-0030 Mycgr3P74352 Zymoseptoria tritici 47 2e-81 301
WERAM-Lab-0033 EDR12730 Laccaria bicolor 48 3e-81 300
WERAM-Miv-0011 MVLG_01737T0 Microbotryum violaceum 34 6e-81 299
WERAM-Glm-0121 GLYMA11G02580.4 Glycine max 45 5e-80 296
WERAM-Met-0120 AES94050 Medicago truncatula 45 8e-80 295
WERAM-Sol-0104 Solyc08g081000.2.1 Solanum lycopersicum 45 1e-79 295
WERAM-Arl-0119 scaffold_200168.1 Arabidopsis lyrata 46 2e-79 294
WERAM-Sot-0035 PGSC0003DMT400029865 Solanum tuberosum 52 5e-79 293
WERAM-Bro-0173 Bo9g029100.1 Brassica oleracea 46 1e-78 291
WERAM-Crn-0020 AAW43237 Cryptococcus neoformans 42 1e-78 291
WERAM-Prp-0007 EMJ11636 Prunus persica 45 3e-78 290
WERAM-Brr-0139 Bra027644.1-P Brassica rapa 46 6e-78 289
WERAM-Amt-0017 ERM95079 Amborella trichopoda 39 6e-78 289
WERAM-Sob-0138 Sb10g031260.1 Sorghum bicolor 35 1e-77 288
WERAM-Ved-0033 EGY18973 Verticillium dahliae 47 4e-77 286
WERAM-Aet-0037 EMT30548 Aegilops tauschii 46 5e-77 286
WERAM-Sei-0018 Si005667m Setaria italica 40 5e-77 286
WERAM-Tru-0011 TRIUR3_05779-P1 Triticum urartu 46 2e-76 284
WERAM-Tra-0319 Traes_7DL_7804189BC.1 Triticum aestivum 49 3e-76 283
WERAM-Lep-0069 LPERR06G23820.1 Leersia perrieri 47 9e-76 282
Created Date 25-Jun-2016