WERAM Information

Tag Content
WERAM ID WERAM-Ran-0144
Ensembl Protein ID ENSRNOP00000060531.1
Gene Name Prdm9
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000021493.6 ENSRNOT00000066370.3 ENSRNOP00000060531.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 1.40e-42 145 250 362
Organism Rattus norvegicus
Domain Profile
  HMT RIZ
               RIZ.txt   3 velaessipkeglgvya.kkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNL 90 
                           +++ +s ip++glgv++ +++++ g +fGP+ G++   +e+ee+an++++w+i++ +++++y vD++de+++nW+ryvn+Ar++eeqNL
  ENSRNOP00000060531.1 250 LRIGPSGIPEAGLGVWNeASDLPVGLHFGPYKGQI---TEDEEAANSGYSWLITKGRNCYEY-VDGQDESQANWMRYVNCARDDEEQNL 334
                           68999************99***************9...9999********************.************************** PP
               RIZ.txt  91 aalqineqifYktikdIepdeELLvwyk 118
                           +a+q++++ifY+t++ I+p++ELLvwy+
  ENSRNOP00000060531.1 335 VAFQYHRKIFYRTCRVIRPGRELLVWYG 362
                           ***************************6 PP
Protein Sequence
(Fasta)		MSRTMNTNKP EENSTEGDAG KLEWKPKVKD EFKDISIYFS KEEWAEMGEW EKIRYRNVKR 60
NYKMLISIGL RAPRPAFMCY QRQAIKPQIN DNEDSDEEWT PKQQVSSPWV PFRVKHSKQQ 120
KETPRMPLSD KSSVKEVFGI ENLLNTSGSE HAQKPVCSPE EGNTSGQHFG KKLKLRRKNV 180
EVNRYRLRER KDLAYEEVSE PQDDDYLYCE KCQNFFIDSC PNHGPPVFVK DSVVDRGHPN 240
HSVLSLPPGL RIGPSGIPEA GLGVWNEASD LPVGLHFGPY KGQITEDEEA ANSGYSWLIT 300
KGRNCYEYVD GQDESQANWM RYVNCARDDE EQNLVAFQYH RKIFYRTCRV IRPGRELLVW 360
YGDEYGQELG IKWGSKMKKG FTAGRELRTE IHPCFLCSLA FSSQKFLTQH VEWNHRTEIF 420
PGASARINPK PGDPCPDQLQ EHFDSQNKND KASNEVKRKS KPRHKWTRQR ISTAFSSTLK 480
EQMRSEESKR TVEEELRTGQ TTNIEDTAKS FIASETSRIE RQCGQCFSDK SNVSEHQRTH 540
TGEKPYICRE CGRGFSQKSD LIKHQRTHTE EKPYICRECG RGFTQKSDLI KHQRTHTEEK 600
PYICRECGRG FTQKSDLIKH QRTHTGEKPY ICRECGRGFT QKSDLIKHQR THTEEKPYIC 660
RECGRGFTQK SSLIRHQRTH TGEKPYICRE CGLGFTQKSN LIRHLRTHTG EKPYICRECG 720
LGFTRKSNLI QHQRTHTGEK PYICRECGQG LTWKSSLIQH QRTHTGEKPY ICRECGRGFT 780
WKSSLIQHQR THTVEK 796
Nucleotide Sequence
(Fasta)		CTCCTCAGAA GGACGAACGG CGGCGGTGGC TGCAGAGCCA CAGGATTCTG GACCATGAGT 60
ACAGGCGAAA CCTTCAAGAC CAGCGAGACT TTCTAGGCTC AGCCCGACCA TAGGACCCTG 120
ATCTTCTCCA GGGAAATGTC CCGCACCATG AACACCAACA AGCCGGAAGA GAATAGTACT 180
GAAGGAGATG CAGGGAAACT CGAGTGGAAA CCCAAGGTCA AAGATGAGTT CAAAGACATT 240
TCCATATACT TCTCCAAAGA AGAATGGGCA GAGATGGGAG AGTGGGAGAA AATTCGCTAT 300
AGAAATGTGA AAAGGAACTA TAAAATGCTG ATTTCTATAG GTCTCAGAGC CCCTAGACCA 360
GCTTTCATGT GTTACCAAAG GCAGGCAATC AAGCCCCAGA TAAATGACAA TGAGGATTCT 420
GATGAGGAAT GGACACCAAA GCAGCAAGTC AGTTCTCCTT GGGTGCCTTT CCGGGTGAAG 480
CACAGTAAAC AACAGAAGGA AACACCCAGA ATGCCATTAA GTGATAAATC TAGTGTGAAG 540
GAAGTATTTG GAATAGAAAA TTTGCTGAAC ACAAGTGGCT CAGAGCATGC CCAGAAACCA 600
GTGTGCTCCC CTGAAGAAGG GAATACCTCC GGACAGCACT TTGGAAAAAA ACTGAAACTC 660
AGGAGAAAGA ATGTTGAAGT GAATAGGTAC AGGCTGCGAG AGAGAAAGGA CCTTGCATAT 720
GAAGAGGTCA GCGAGCCCCA GGATGATGAC TACCTCTATT GTGAGAAGTG CCAGAATTTC 780
TTCATCGACA GTTGTCCCAA CCATGGGCCT CCTGTATTTG TAAAAGACAG TGTGGTGGAC 840
AGGGGGCATC CCAACCACTC AGTCCTCAGT CTGCCCCCTG GGCTGAGAAT TGGTCCATCA 900
GGCATCCCTG AAGCTGGACT TGGAGTATGG AATGAAGCAT CTGATCTACC AGTGGGTCTG 960
CACTTTGGTC CCTATAAGGG CCAGATTACA GAGGATGAAG AGGCAGCCAA CAGTGGATAC 1020
TCCTGGCTGA TCACCAAGGG AAGAAACTGC TATGAGTATG TGGATGGGCA GGATGAGTCC 1080
CAAGCCAACT GGATGAGGTA TGTGAACTGT GCCCGGGATG ACGAAGAGCA GAACCTGGTG 1140
GCCTTTCAAT ATCACAGGAA AATCTTCTAT CGGACCTGCC GGGTCATCAG GCCAGGTCGC 1200
GAGCTTCTGG TCTGGTATGG GGATGAGTAT GGCCAAGAGC TGGGCATCAA GTGGGGAAGC 1260
AAGATGAAGA AAGGATTCAC AGCAGGAAGA GAACTAAGGA CAGAGATTCA TCCTTGTTTT 1320
TTGTGCTCTT TGGCCTTCTC AAGTCAGAAA TTCCTCACTC AACATGTAGA ATGGAATCAT 1380
CGCACAGAAA TCTTCCCAGG AGCATCTGCA AGGATAAATC CTAAGCCAGG AGATCCCTGT 1440
CCAGATCAGC TTCAGGAACA TTTTGATTCA CAGAACAAGA ATGACAAAGC CAGCAATGAA 1500
GTCAAAAGAA AATCCAAACC CAGGCATAAA TGGACAAGAC AGAGGATTTC AACAGCCTTT 1560
TCCAGTACTC TCAAAGAACA AATGAGATCT GAGGAAAGTA AGAGAACTGT AGAAGAAGAG 1620
CTTAGAACAG GCCAGACAAC AAATATAGAG GACACAGCCA AATCATTTAT TGCATCAGAA 1680
ACCTCAAGAA TTGAAAGGCA ATGTGGGCAA TGTTTCAGTG ATAAGTCAAA TGTCAGTGAG 1740
CACCAGAGGA CACACACAGG GGAGAAGCCC TACATTTGCA GGGAGTGTGG GCGGGGCTTT 1800
TCACAGAAGT CAGACCTCAT CAAGCACCAG AGGACACACA CAGAGGAGAA GCCCTACATT 1860
TGCAGGGAGT GTGGGCGGGG CTTTACACAG AAGTCAGACC TCATCAAGCA CCAGAGGACA 1920
CACACAGAGG AGAAGCCCTA CATTTGCAGG GAGTGTGGGC GGGGCTTTAC ACAGAAGTCA 1980
GACCTCATCA AGCACCAGAG GACACACACA GGGGAGAAGC CCTACATTTG CAGGGAGTGT 2040
GGGCGGGGCT TTACACAGAA GTCAGACCTC ATCAAGCACC AGAGGACACA CACAGAGGAG 2100
AAGCCCTACA TTTGCAGGGA GTGTGGGCGG GGCTTTACAC AGAAGTCAAG CCTCATCCGG 2160
CACCAGAGGA CACACACAGG GGAGAAGCCC TACATTTGCA GGGAGTGTGG GCTGGGCTTT 2220
ACACAGAAGT CAAACCTCAT CCGGCACCTG AGGACACACA CAGGGGAGAA GCCCTACATT 2280
TGCAGGGAGT GTGGGCTGGG CTTTACACGG AAGTCAAACC TCATCCAGCA CCAGAGGACA 2340
CACACAGGGG AGAAGCCCTA CATTTGCAGG GAGTGTGGGC AGGGCCTTAC ATGGAAGTCA 2400
AGCCTCATCC AGCACCAGAG GACACACACA GGGGAGAAGC CCTACATTTG CAGGGAGTGT 2460
GGGCGGGGCT TTACATGGAA GTCAAGCCTC ATCCAGCACC AGAGGACACA CACAGTGGAG 2520
AAGTAATATC TTTTCAAAAA GAATGAGAAA GCCAATAGCA ATAAAACCGC ATCTCAACAA 2580
TTACAGAAAG ACCACTAAAC ATCTTCCCAC CTGTTCTACT AAAACTTCTG AGAAGTCTGA 2640
TTTTCAAAAC TAGAGTATAA AATGATTAAA AAGGAAAATT AAATCCCCTT TTCTTTTCCT 2700
TTTCGTTTTT TAA 2714
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mum-0189 ENSMUSP00000131871.1 Mus musculus 89 0.0 1472
WERAM-Caj-0109 ENSCJAP00000019231.2 Callithrix jacchus 69 0.0 1145
WERAM-Paa-0092 ENSPANP00000006501.1 Papio anubis 70 0.0 1140
WERAM-Poa-0137 ENSPPYP00000017162.1 Pongo abelii 69 0.0 1136
WERAM-Hos-0177 ENSP00000296682.3 Homo sapiens 69 0.0 1125
WERAM-Dio-0007 ENSDORP00000000987.1 Dipodomys ordii 69 0.0 1098
WERAM-Sus-0183 ENSSSCP00000023246.1 Sus scrofa 68 0.0 1063
WERAM-Dan-0153 ENSDNOP00000019431.1 Dasypus novemcinctus 65 0.0 1057
WERAM-Bot-0024 ENSBTAP00000047652.2 Bos taurus 62 0.0 1004
WERAM-Chs-0202 ENSCSAP00000013264.1 Chlorocebus sabaeus 70 0.0 969
WERAM-Prc-0084 ENSPCAP00000007153.1 Procavia capensis 60 0.0 902
WERAM-Orc-0183 ENSOCUP00000016681.2 Oryctolagus cuniculus 69 0.0 890
WERAM-Otg-0200 ENSOGAP00000015635.1 Otolemur garnettii 57 0.0 858
WERAM-Mam-0029 ENSMMUP00000005026.2 Macaca mulatta 70 0.0 811
WERAM-Mup-0073 ENSMPUP00000006803.1 Mustela putorius furo 66 0.0 796
WERAM-Soa-0002 ENSSARP00000000218.1 Sorex araneus 67 0.0 756
WERAM-Mim-0047 ENSMICP00000004601.1 Microcebus murinus 71 0.0 750
WERAM-Pes-0005 ENSPSIP00000002371.1 Pelodiscus sinensis 48 0.0 719
WERAM-Aim-0022 ENSAMEP00000001535.1 Ailuropoda melanoleuca 69 9e-173 604
WERAM-Fec-0044 ENSFCAP00000003508.2 Felis catus 75 2e-170 597
WERAM-Pat-0067 ENSPTRP00000014513.3 Pan troglodytes 73 1e-161 567
WERAM-Myl-0115 ENSMLUP00000009197.2 Myotis lucifugus 63 2e-155 547
WERAM-Gog-0010 ENSGGOP00000000700.2 Gorilla gorilla 68 9e-154 541
WERAM-Ocp-0132 ENSOPRP00000013913.2 Ochotona princeps 55 1e-152 537
WERAM-Chh-0045 ENSCHOP00000005073.1 Choloepus hoffmanni 67 3e-130 463
WERAM-Mod-0198 ENSMODP00000031611.2 Monodelphis domestica 63 4e-129 459
WERAM-Ova-0031 ENSOARP00000004225.1 Ovis aries 67 2e-127 454
WERAM-Eqc-0097 ENSECAP00000011324.1 Equus caballus 78 3e-127 453
WERAM-Loa-0175 ENSLAFP00000017573.2 Loxodonta africana 73 1e-114 411
WERAM-Tas-0082 ENSTSYP00000008295.1 Tarsius syrichta 55 5e-84 310
WERAM-Lac-0137 ENSLACP00000015755.1 Latimeria chalumnae 60 2e-77 287
WERAM-Ora-0057 ENSOANP00000008625.2 Ornithorhynchus anatinus 60 6e-69 259
WERAM-Nol-0097 ENSNLEP00000011114.2 Nomascus leucogenys 31 2e-68 258
WERAM-Tut-0128 ENSTTRP00000010427.1 Tursiops truncatus 30 7e-66 249
WERAM-Meg-0110 ENSMGAP00000011137.1 Meleagris gallopavo 30 4e-64 243
WERAM-Xim-0168 ENSXMAP00000013864.1 Xiphophorus maculatus 29 1e-63 242
WERAM-Anp-0121 ENSAPLP00000013678.1 Anas platyrhynchos 29 1e-62 239
WERAM-Orn-0032 ENSONIP00000003899.1 Oreochromis niloticus 30 4e-62 237
WERAM-Tag-0028 ENSTGUP00000001982.1 Taeniopygia guttata 31 6e-62 236
WERAM-Orla-0174 ENSORLP00000020343.1 Oryzias latipes 30 7e-62 236
WERAM-Ptv-0137 ENSPVAP00000011602.1 Pteropus vampyrus 29 8e-62 236
WERAM-Leo-0089 ENSLOCP00000011948.1 Lepisosteus oculatus 31 1e-61 235
WERAM-Tar-0166 ENSTRUP00000035409.1 Takifugu rubripes 30 6e-61 233
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 30 5e-60 230
WERAM-Xet-0015 ENSXETP00000004492.3 Xenopus tropicalis 27 1e-58 225
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 54 1e-56 219
WERAM-Gaga-0111 ENSGALP00000019484.4 Gallus gallus 29 9e-56 216
WERAM-Cap-0142 ENSCPOP00000011596.2 Cavia porcellus 30 4e-55 213
WERAM-Vip-0075 ENSVPAP00000006917.1 Vicugna pacos 30 2e-54 212
WERAM-Dar-0015 ENSDARP00000106969.1 Danio rerio 39 5e-53 206
WERAM-Gam-0122 ENSGMOP00000012899.1 Gadus morhua 25 2e-38 158
WERAM-Ten-0069 ENSTNIP00000008627.1 Tetraodon nigroviridis 26 7e-37 153
WERAM-Caf-0212 ENSCAFP00000031903.3 Canis familiaris 28 1e-35 149
WERAM-Fia-0094 ENSFALP00000007850.1 Ficedula albicollis 28 1e-35 149
WERAM-Ect-0147 ENSETEP00000016463.1 Echinops telfairi 28 1e-35 149
WERAM-Sah-0097 ENSSHAP00000011079.1 Sarcophilus harrisii 27 4e-35 147
WERAM-Anc-0027 ENSACAP00000003308.3 Anolis carolinensis 29 1e-33 142
WERAM-Tub-0069 ENSTBEP00000008639.1 Tupaia belangeri 36 3e-32 138
WERAM-Mae-0109 ENSMEUP00000010466.1 Macropus eugenii 26 5e-31 133
WERAM-Ict-0141 ENSSTOP00000014774.2 Ictidomys tridecemlineatus 40 6e-27 120
WERAM-Asm-0040 ENSAMXP00000005078.1 Astyanax mexicanus 42 3e-26 117
WERAM-Pof-0037 ENSPFOP00000003054.2 Poecilia formosa 42 9e-26 116
WERAM-Gaa-0023 ENSGACP00000003553.1 Gasterosteus aculeatus 42 4e-25 114
Created Date 25-Jun-2016