WERAM Information

Tag Content
WERAM ID WERAM-Ran-0169
Ensembl Protein ID ENSRNOP00000041369.3
Gene Name Prdm6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000030486.6 ENSRNOT00000047755.5 ENSRNOP00000041369.3
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 1.60e-32 112.5 249 367
Organism Rattus norvegicus
Domain Profile
  HMT RIZ
               RIZ.txt   2 evelaessipkeglgvyakkkiekgekfGPfvGekkileevee..nanekliweisedkgevkyivDasdeeksnWlryvnvArskeeq 88 
                           ev l++s++p+   g+ a+++i++g+ +GPf G    +e+v++    n++ +wei++++g+ ++++D+ +++ks+W+ry+++Ar + eq
  ENSRNOP00000041369.3 249 EVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLPPEKVQTgaVRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYIRCARHCGEQ 337
                           6789******************************9999988862267999*************************************** PP
               RIZ.txt  89 NLaalqineqifYktikdIepdeELLvwyk 118
                           NL+++q+ ++ifY+++ dI+ ++ELLvwy+
  ENSRNOP00000041369.3 338 NLTVVQYRSNIFYRACVDIPRGTELLVWYN 367
                           *****************************6 PP
Protein Sequence
(Fasta)		MLKPGDPGGS AFLKVDPAYL QHWQQLFPHG GGGGPLKGSG AALALGAPQS LQPPLPPPPP 60
ERAEPPPDSL RPRPASLSSV SSTPAPSSTS ASSASSCAAA AAAAAAALAG LSALPVSQMP 120
VFAPLAAAAV AAEPLPPKDL CLGASSGPGP AKCGGGGSVG DGRGVPRFRC SAEELDYYLY 180
GQQRMEIIPL NQHTSDPNNR CDMCADNRNG ECPMHGPLHS LRRLVGTSSA AAAAPPPELP 240
EWLRDLPREV CLCTSTVPGL AYGICAAQRI QQGTWIGPFQ GVLLPPEKVQ TGAVRNTQHL 300
WEIYDQDGTL QHFIDGGEPS KSSWMRYIRC ARHCGEQNLT VVQYRSNIFY RACVDIPRGT 360
ELLVWYNDSY TSFFGIPLQC IAQDENLNVP STVMEAMCRQ DSLQQPFNKS SKLSPSGQQR 420
SVVFPQTPCS RNFSLLDKSG PIEAGFNQIN VKNQRVLASP TSTSQLHSEF SDWHLWKCGQ 480
CFKTFTQRIL LQMHVCTQNP DRPYQCGHCS QSFSQPSELR NHVVTHSSDR PFKCGYCGRA 540
FAGATTLNNH IRTHTGEKPF KCERCERSFT QATQLSRHQR MPNECKPITE SPESIEVD 598
Nucleotide Sequence
(Fasta)		ATGCTGAAGC CGGGGGACCC CGGCGGCTCG GCCTTCCTCA AAGTGGACCC AGCTTACCTG 60
CAGCACTGGC AGCAACTCTT CCCGCATGGA GGAGGCGGCG GCCCGCTCAA AGGCAGCGGC 120
GCCGCGCTCG CCCTGGGCGC GCCCCAGTCC CTGCAGCCGC CGCTACCGCC GCCGCCTCCT 180
GAGCGCGCCG AGCCTCCACC GGACAGCCTG CGGCCGCGGC CTGCCTCGCT CTCGTCAGTC 240
TCATCCACCC CGGCTCCTTC CTCCACCTCT GCCTCTTCTG CCTCCTCCTG CGCTGCTGCC 300
GCCGCCGCGG CCGCCGCCGC GCTGGCGGGT CTCTCGGCCC TGCCCGTGTC GCAGATGCCG 360
GTGTTCGCGC CTCTAGCTGC TGCTGCGGTG GCCGCGGAGC CGCTGCCCCC AAAGGACCTG 420
TGCCTCGGCG CCTCCTCGGG CCCCGGGCCG GCTAAGTGCG GCGGCGGCGG CAGCGTGGGT 480
GACGGCCGTG GCGTCCCACG TTTCCGCTGC AGCGCCGAGG AGCTGGACTA TTACCTGTAT 540
GGGCAGCAGC GCATGGAAAT CATCCCGCTC AACCAGCACA CCAGCGACCC CAACAATCGT 600
TGCGACATGT GCGCGGACAA CCGCAACGGG GAGTGCCCCA TGCACGGGCC GCTGCACTCG 660
CTGCGCCGGC TTGTGGGCAC CAGCAGCGCG GCGGCCGCTG CACCCCCGCC GGAGCTGCCC 720
GAGTGGCTAC GGGACCTGCC GCGGGAGGTA TGCCTGTGCA CCAGCACCGT GCCAGGCCTG 780
GCGTACGGCA TCTGTGCCGC ACAGAGGATC CAGCAGGGCA CCTGGATTGG GCCCTTCCAG 840
GGCGTGCTCC TGCCCCCGGA GAAAGTGCAG ACCGGCGCAG TGAGGAACAC GCAGCACCTC 900
TGGGAGATCT ATGATCAAGA TGGGACACTT CAGCACTTTA TTGATGGTGG GGAGCCTAGT 960
AAGTCGAGCT GGATGAGGTA TATCCGATGT GCAAGGCACT GTGGAGAACA GAATCTAACA 1020
GTAGTTCAGT ACAGGTCGAA TATATTCTAC CGAGCCTGTG TAGATATTCC CAGGGGCACC 1080
GAGCTTCTGG TGTGGTACAA TGACAGCTAT ACGTCTTTCT TTGGGATTCC TTTACAATGC 1140
ATTGCCCAGG ATGAAAACTT GAATGTCCCT TCCACGGTAA TGGAAGCCAT GTGCCGACAA 1200
GATTCCCTGC AGCAGCCCTT CAACAAGAGC AGCAAGCTTT CTCCCTCGGG CCAGCAGCGC 1260
TCCGTGGTTT TCCCACAGAC TCCCTGCAGC AGGAATTTCT CTCTGTTGGA TAAATCTGGG 1320
CCCATCGAGG CAGGATTTAA CCAAATCAAC GTGAAGAATC AGAGGGTCCT GGCGAGCCCA 1380
ACCTCTACCA GCCAGCTGCA CTCGGAGTTC AGCGACTGGC ACCTCTGGAA GTGCGGCCAG 1440
TGCTTTAAGA CTTTCACGCA GCGCATTCTC CTGCAGATGC ACGTGTGTAC GCAGAACCCT 1500
GACAGACCCT ACCAGTGTGG CCACTGCTCG CAGTCCTTTT CCCAGCCATC AGAACTGAGG 1560
AACCACGTAG TCACTCACTC CAGTGACCGG CCTTTCAAGT GTGGCTACTG TGGCCGTGCC 1620
TTTGCTGGGG CCACCACCCT CAACAACCAC ATCCGGACCC ACACTGGAGA AAAGCCCTTC 1680
AAGTGCGAGA GGTGCGAGCG GAGCTTCACC CAGGCCACGC AGCTGAGTCG GCACCAGCGC 1740
ATGCCCAATG AGTGTAAGCC GATAACCGAG AGCCCGGAAT CAATCGAAGT GGATTAA 1798
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mum-0220 ENSMUSP00000089513.3 Mus musculus 99 0.0 875
WERAM-Caf-0212 ENSCAFP00000031903.3 Canis familiaris 98 0.0 869
WERAM-Loa-0003 ENSLAFP00000000335.4 Loxodonta africana 98 0.0 868
WERAM-Paa-0150 ENSPANP00000007800.1 Papio anubis 98 0.0 868
WERAM-Ova-0204 ENSOARP00000020272.1 Ovis aries 97 0.0 863
WERAM-Aim-0176 ENSAMEP00000016566.1 Ailuropoda melanoleuca 97 0.0 863
WERAM-Tut-0079 ENSTTRP00000006439.1 Tursiops truncatus 97 0.0 859
WERAM-Mod-0115 ENSMODP00000016775.4 Monodelphis domestica 97 0.0 854
WERAM-Sah-0097 ENSSHAP00000011079.1 Sarcophilus harrisii 96 0.0 853
WERAM-Gaga-0057 ENSGALP00000008574.4 Gallus gallus 97 0.0 853
WERAM-Fia-0094 ENSFALP00000007850.1 Ficedula albicollis 95 0.0 843
WERAM-Anc-0027 ENSACAP00000003308.3 Anolis carolinensis 91 0.0 826
WERAM-Mae-0109 ENSMEUP00000010466.1 Macropus eugenii 94 0.0 820
WERAM-Pes-0066 ENSPSIP00000008417.1 Pelodiscus sinensis 96 0.0 812
WERAM-Sus-0105 ENSSSCP00000015146.2 Sus scrofa 92 0.0 809
WERAM-Caj-0182 ENSCJAP00000031870.2 Callithrix jacchus 98 0.0 798
WERAM-Eqc-0022 ENSECAP00000003259.1 Equus caballus 98 0.0 796
WERAM-Mim-0073 ENSMICP00000007053.1 Microcebus murinus 97 0.0 789
WERAM-Ocp-0043 ENSOPRP00000003686.1 Ochotona princeps 97 0.0 787
WERAM-Myl-0113 ENSMLUP00000009157.2 Myotis lucifugus 96 0.0 786
WERAM-Tag-0018 ENSTGUP00000001146.1 Taeniopygia guttata 95 0.0 773
WERAM-Orn-0168 ENSONIP00000017375.1 Oreochromis niloticus 81 0.0 743
WERAM-Soa-0070 ENSSARP00000006897.1 Sorex araneus 82 0.0 635
WERAM-Orla-0069 ENSORLP00000008922.1 Oryzias latipes 34 1e-38 159
WERAM-Tar-0225 ENSTRUP00000047797.1 Takifugu rubripes 34 3e-38 157
WERAM-Gog-0123 ENSGGOP00000010306.2 Gorilla gorilla 32 3e-38 157
WERAM-Dar-0018 ENSDARP00000015394.5 Danio rerio 33 3e-38 157
WERAM-Chs-0179 ENSCSAP00000010875.1 Chlorocebus sabaeus 32 4e-38 157
WERAM-Pat-0178 ENSPTRP00000036745.1 Pan troglodytes 32 4e-38 157
WERAM-Hos-0119 ENSP00000253008.2 Homo sapiens 32 4e-38 157
WERAM-Poa-0186 ENSPPYP00000022077.1 Pongo abelii 32 4e-38 157
WERAM-Lac-0168 ENSLACP00000019977.1 Latimeria chalumnae 32 7e-38 156
WERAM-Gaa-0177 ENSGACP00000022065.1 Gasterosteus aculeatus 33 1e-37 155
WERAM-Bot-0192 ENSBTAP00000032579.2 Bos taurus 32 2e-37 154
WERAM-Otg-0085 ENSOGAP00000006760.2 Otolemur garnettii 32 2e-37 154
WERAM-Ptv-0010 ENSPVAP00000001423.1 Pteropus vampyrus 32 2e-37 154
WERAM-Orc-0078 ENSOCUP00000007120.2 Oryctolagus cuniculus 32 3e-37 154
WERAM-Dan-0173 ENSDNOP00000030867.1 Dasypus novemcinctus 32 3e-37 154
WERAM-Ict-0060 ENSSTOP00000005349.2 Ictidomys tridecemlineatus 32 4e-37 154
WERAM-Meg-0059 ENSMGAP00000005346.1 Meleagris gallopavo 32 4e-37 153
WERAM-Anp-0104 ENSAPLP00000012181.1 Anas platyrhynchos 32 1e-36 152
WERAM-Ten-0104 ENSTNIP00000011876.1 Tetraodon nigroviridis 33 2e-36 151
WERAM-Pof-0242 ENSPFOP00000019968.2 Poecilia formosa 34 5e-35 146
WERAM-Gam-0121 ENSGMOP00000012620.1 Gadus morhua 35 2e-34 144
WERAM-Xim-0064 ENSXMAP00000005547.1 Xiphophorus maculatus 34 2e-34 144
WERAM-Asm-0083 ENSAMXP00000008799.1 Astyanax mexicanus 35 6e-34 143
WERAM-Mam-0029 ENSMMUP00000005026.2 Macaca mulatta 28 1e-33 142
WERAM-Fec-0217 ENSFCAP00000016661.1 Felis catus 35 8e-33 139
WERAM-Cap-0072 ENSCPOP00000005323.2 Cavia porcellus 34 2e-32 137
WERAM-Mup-0081 ENSMPUP00000007423.1 Mustela putorius furo 28 2e-31 135
WERAM-Ora-0122 ENSOANP00000023793.3 Ornithorhynchus anatinus 26 3e-31 134
WERAM-Leo-0047 ENSLOCP00000006545.1 Lepisosteus oculatus 44 2e-30 131
WERAM-Ect-0066 ENSETEP00000007192.1 Echinops telfairi 45 3e-30 130
WERAM-Nol-0140 ENSNLEP00000015220.1 Nomascus leucogenys 45 4e-30 130
WERAM-Xet-0008 ENSXETP00000002850.3 Xenopus tropicalis 45 8e-29 126
WERAM-Dio-0007 ENSDORP00000000987.1 Dipodomys ordii 29 1e-28 125
WERAM-Tub-0069 ENSTBEP00000008639.1 Tupaia belangeri 27 2e-28 124
WERAM-Chh-0045 ENSCHOP00000005073.1 Choloepus hoffmanni 30 2e-28 124
WERAM-Prc-0123 ENSPCAP00000010913.1 Procavia capensis 26 3e-21 100
WERAM-Vip-0075 ENSVPAP00000006917.1 Vicugna pacos 25 4e-21 100
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 34 4e-19 94.0
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 37 6e-19 93.6
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 27 1e-17 89.0
Created Date 25-Jun-2016