WERAM Information

Tag Content
WERAM ID WERAM-Orn-0168
Ensembl Protein ID ENSONIP00000017375.1
Gene Name PRDM6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSONIG00000013818.1 ENSONIT00000017390.1 ENSONIP00000017375.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 6.20e-33 113.8 236 354
Organism Oreochromis niloticus
Domain Profile
  HMT RIZ
               RIZ.txt   2 evelaessipkeglgvyakkkiekgekfGPfvGekkileeve..enanekliweisedkgevkyivDasdeeksnWlryvnvArskeeq 88 
                           ev l++s++p+ g g+ a+++i++g+ +GPf G   +le+ +  +  n++ +wei++++g+ ++++D++d++ks+W+ry+++Ar + eq
  ENSONIP00000017375.1 236 EVCLCTSTVPGLGYGICAAQRIPQGTWIGPFQGVPLMLEKAQsgVVRNTRHLWEIYDSEGTLQHFIDGNDPSKSSWMRYIRCARHCGEQ 324
                           6789*****************************9999887662267899**************************************** PP
               RIZ.txt  89 NLaalqineqifYktikdIepdeELLvwyk 118
                           N++++q+ + ifY+++ dI+ ++ELLvwy+
  ENSONIP00000017375.1 325 NMMVVQYRSCIFYRACMDIPRGTELLVWYN 354
                           *****************************6 PP
Protein Sequence
(Fasta)		MLKPGDPSGS AFLKVDPSYL QHWQQLFPQA QLKAPLAPPP PPPDRLSIPI DTVRPSRLHS 60
HLLASTHCTS SSSSSTSSSS AASSSAAAAA AAAAAAAAAA LTPSTSISIS TNAGLSQLPV 120
PQQIALFGQA LAPVVKSSSS GGSSEEGGKG TVTRFKLTAE ELDYYLYGQQ RMEIIPLSNH 180
TGELNNRCDM CADNRNGECP MHGPLHSLRR LVGTSSTAAP VTLPDIPDWL RDLPREVCLC 240
TSTVPGLGYG ICAAQRIPQG TWIGPFQGVP LMLEKAQSGV VRNTRHLWEI YDSEGTLQHF 300
IDGNDPSKSS WMRYIRCARH CGEQNMMVVQ YRSCIFYRAC MDIPRGTELL VWYNDSYTSF 360
FGIPLQCIAQ DENLNVPATV VEAMTRQESL QSFSKNGKPS SSSSSSSSSS TPSSTLMRSM 420
VFPHSPCPRS FSLLDKVGVQ SDSSFGQLGS KNQRVLASPT STSQLSSEFS DWHLWKCGQC 480
FKTFTQRILL QMHVCPQNPD RPYQCGHCSQ SFSQPSELRN HVVTHSSDRP FKCGYCGRAF 540
AGATTLNNHI RTHTGEKPFK CERCDRSFTQ ATQLSRHQRL PNECKPVNET SESIEVD 597
Nucleotide Sequence
(Fasta)		ATGCTGAAGC CGGGCGACCC GAGCGGTTCG GCCTTCCTTA AGGTGGACCC GTCCTACCTG 60
CAGCACTGGC AGCAGCTGTT CCCTCAGGCT CAGCTAAAAG CTCCTCTGGC TCCTCCACCG 120
CCCCCACCTG ACCGTCTCTC CATCCCTATA GACACCGTGC GCCCGTCCCG CCTGCATAGC 180
CACCTCCTGG CTTCCACGCA CTGCACTTCT TCCTCTTCTT CTTCCACGTC CTCCTCCTCA 240
GCAGCTTCTT CTTCAGCAGC AGCAGCAGCT GCAGCCGCAG CCGCAGCAGC AGCAGCGGCC 300
CTTACTCCAT CCACCTCCAT CTCCATTTCC ACCAATGCAG GGCTCTCCCA GCTGCCTGTG 360
CCCCAGCAGA TCGCACTTTT TGGGCAGGCA TTGGCCCCAG TCGTGAAGAG CAGCAGCAGC 420
GGAGGAAGCA GCGAGGAGGG CGGCAAAGGG ACCGTGACGA GGTTCAAGCT GACGGCAGAG 480
GAGCTGGACT ACTATCTGTA CGGACAGCAG AGGATGGAGA TCATCCCGCT GAGCAACCAC 540
ACGGGAGAGC TCAACAACCG TTGTGACATG TGTGCAGACA ACAGGAACGG TGAGTGTCCG 600
ATGCATGGCC CTCTTCACTC TCTGCGCCGG CTCGTCGGCA CCAGCAGCAC GGCAGCACCT 660
GTCACCCTAC CAGACATCCC CGATTGGCTG AGAGACCTGC CCAGAGAGGT GTGTCTGTGC 720
ACCAGCACAG TTCCTGGTCT GGGTTACGGG ATCTGTGCAG CTCAGAGGAT CCCTCAGGGA 780
ACCTGGATTG GCCCGTTTCA AGGAGTCCCC CTGATGCTGG AAAAAGCGCA GTCTGGAGTG 840
GTCAGGAACA CCCGACACTT GTGGGAGATC TATGATTCAG AGGGAACGTT ACAGCACTTC 900
ATCGATGGTA ATGATCCCAG TAAATCCAGC TGGATGAGGT ATATTCGCTG TGCGAGACAC 960
TGTGGGGAGC AGAACATGAT GGTTGTACAG TACAGATCCT GCATCTTCTA CAGAGCATGT 1020
ATGGATATCC CCAGAGGAAC AGAGCTGCTG GTTTGGTACA ACGACTCCTA CACCTCGTTC 1080
TTCGGTATCC CGCTGCAGTG CATCGCCCAG GATGAAAACT TAAATGTCCC AGCCACAGTG 1140
GTGGAGGCCA TGACGAGGCA GGAATCCCTC CAGTCCTTCA GCAAAAACGG CAAACCCTCT 1200
TCCTCATCCT CTTCCTCTTC ATCGTCCTCC ACTCCGTCCT CCACCCTCAT GCGCTCCATG 1260
GTCTTCCCCC ACTCCCCATG CCCTCGGAGT TTCTCCCTGT TGGATAAGGT TGGGGTTCAG 1320
TCAGACTCCA GTTTTGGCCA GTTGGGGTCA AAGAACCAGA GAGTCCTGGC AAGTCCCACA 1380
TCCACCAGCC AGCTTAGCAG TGAGTTCAGC GACTGGCACC TGTGGAAATG TGGCCAGTGC 1440
TTCAAGACCT TCACCCAGAG GATCCTGCTC CAGATGCATG TCTGTCCGCA AAATCCTGAC 1500
CGACCATACC AGTGTGGCCA CTGCTCCCAG TCCTTCTCTC AGCCGTCAGA GTTGAGGAAC 1560
CATGTAGTGA CGCACTCCAG CGACCGACCT TTCAAATGCG GATACTGCGG CCGGGCCTTC 1620
GCTGGCGCCA CAACGCTCAA CAACCACATC CGCACACACA CAGGAGAGAA GCCGTTCAAG 1680
TGCGAGCGTT GCGACCGCAG CTTCACACAG GCCACTCAGC TCAGCCGCCA TCAGCGACTT 1740
CCCAACGAGT GCAAACCCGT GAACGAGACC AGCGAGTCCA TCGAGGTGGA TTAA 1795
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Gaga-0057 ENSGALP00000008574.4 Gallus gallus 81 0.0 755
WERAM-Anc-0027 ENSACAP00000003308.3 Anolis carolinensis 79 0.0 751
WERAM-Sah-0097 ENSSHAP00000011079.1 Sarcophilus harrisii 82 0.0 751
WERAM-Fia-0094 ENSFALP00000007850.1 Ficedula albicollis 81 0.0 751
WERAM-Loa-0003 ENSLAFP00000000335.4 Loxodonta africana 82 0.0 751
WERAM-Aim-0176 ENSAMEP00000016566.1 Ailuropoda melanoleuca 82 0.0 749
WERAM-Mum-0220 ENSMUSP00000089513.3 Mus musculus 81 0.0 748
WERAM-Caf-0212 ENSCAFP00000031903.3 Canis familiaris 82 0.0 747
WERAM-Mod-0115 ENSMODP00000016775.4 Monodelphis domestica 82 0.0 747
WERAM-Paa-0150 ENSPANP00000007800.1 Papio anubis 81 0.0 746
WERAM-Ova-0204 ENSOARP00000020272.1 Ovis aries 81 0.0 746
WERAM-Ran-0169 ENSRNOP00000041369.3 Rattus norvegicus 81 0.0 744
WERAM-Tut-0079 ENSTTRP00000006439.1 Tursiops truncatus 81 0.0 740
WERAM-Pes-0066 ENSPSIP00000008417.1 Pelodiscus sinensis 81 0.0 719
WERAM-Mae-0109 ENSMEUP00000010466.1 Macropus eugenii 80 0.0 719
WERAM-Sus-0105 ENSSSCP00000015146.2 Sus scrofa 79 0.0 714
WERAM-Ocp-0043 ENSOPRP00000003686.1 Ochotona princeps 82 0.0 692
WERAM-Eqc-0022 ENSECAP00000003259.1 Equus caballus 82 0.0 692
WERAM-Mim-0073 ENSMICP00000007053.1 Microcebus murinus 82 0.0 692
WERAM-Caj-0182 ENSCJAP00000031870.2 Callithrix jacchus 81 0.0 691
WERAM-Tag-0018 ENSTGUP00000001146.1 Taeniopygia guttata 80 0.0 689
WERAM-Myl-0113 ENSMLUP00000009157.2 Myotis lucifugus 81 0.0 687
WERAM-Soa-0070 ENSSARP00000006897.1 Sorex araneus 67 6e-153 538
WERAM-Bot-0054 ENSBTAP00000002795.5 Bos taurus 30 1e-38 159
WERAM-Chs-0202 ENSCSAP00000013264.1 Chlorocebus sabaeus 29 2e-36 151
WERAM-Mam-0029 ENSMMUP00000005026.2 Macaca mulatta 29 8e-36 149
WERAM-Poa-0137 ENSPPYP00000017162.1 Pongo abelii 29 2e-35 148
WERAM-Orc-0206 ENSOCUP00000023211.2 Oryctolagus cuniculus 28 2e-34 144
WERAM-Hos-0177 ENSP00000296682.3 Homo sapiens 28 1e-33 142
WERAM-Gog-0145 ENSGGOP00000012769.2 Gorilla gorilla 27 2e-31 134
WERAM-Mup-0197 ENSMPUP00000016975.1 Mustela putorius furo 27 7e-31 132
WERAM-Tar-0225 ENSTRUP00000047797.1 Takifugu rubripes 33 1e-30 132
WERAM-Pof-0242 ENSPFOP00000019968.2 Poecilia formosa 32 1e-30 132
WERAM-Orla-0069 ENSORLP00000008922.1 Oryzias latipes 31 2e-30 131
WERAM-Dar-0018 ENSDARP00000015394.5 Danio rerio 31 3e-30 130
WERAM-Asm-0075 ENSAMXP00000007875.1 Astyanax mexicanus 31 5e-30 130
WERAM-Xim-0064 ENSXMAP00000005547.1 Xiphophorus maculatus 32 6e-30 130
WERAM-Gaa-0177 ENSGACP00000022065.1 Gasterosteus aculeatus 32 9e-30 129
WERAM-Ten-0104 ENSTNIP00000011876.1 Tetraodon nigroviridis 33 1e-28 125
WERAM-Gam-0121 ENSGMOP00000012620.1 Gadus morhua 43 6e-28 123
WERAM-Ect-0066 ENSETEP00000007192.1 Echinops telfairi 43 1e-27 122
WERAM-Nol-0140 ENSNLEP00000015220.1 Nomascus leucogenys 43 1e-27 122
WERAM-Leo-0047 ENSLOCP00000006545.1 Lepisosteus oculatus 42 1e-27 122
WERAM-Dan-0173 ENSDNOP00000030867.1 Dasypus novemcinctus 43 2e-27 122
WERAM-Ptv-0010 ENSPVAP00000001423.1 Pteropus vampyrus 43 2e-27 122
WERAM-Lac-0168 ENSLACP00000019977.1 Latimeria chalumnae 42 2e-27 122
WERAM-Pat-0178 ENSPTRP00000036745.1 Pan troglodytes 43 2e-27 121
WERAM-Otg-0085 ENSOGAP00000006760.2 Otolemur garnettii 43 2e-27 121
WERAM-Ict-0060 ENSSTOP00000005349.2 Ictidomys tridecemlineatus 43 2e-27 121
WERAM-Cap-0072 ENSCPOP00000005323.2 Cavia porcellus 42 2e-27 121
WERAM-Meg-0059 ENSMGAP00000005346.1 Meleagris gallopavo 43 3e-27 120
WERAM-Fec-0217 ENSFCAP00000016661.1 Felis catus 43 5e-27 120
WERAM-Anp-0104 ENSAPLP00000012181.1 Anas platyrhynchos 43 9e-27 119
WERAM-Xet-0008 ENSXETP00000002850.3 Xenopus tropicalis 42 3e-26 117
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 33 3e-22 104
WERAM-Chh-0063 ENSCHOP00000006916.1 Choloepus hoffmanni 39 3e-20 97.8
WERAM-Prc-0123 ENSPCAP00000010913.1 Procavia capensis 39 7e-20 96.3
WERAM-Ora-0057 ENSOANP00000008625.2 Ornithorhynchus anatinus 34 3e-19 94.7
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 35 3e-19 94.4
WERAM-Tub-0028 ENSTBEP00000003557.1 Tupaia belangeri 35 4e-19 94.0
WERAM-Vip-0075 ENSVPAP00000006917.1 Vicugna pacos 24 6e-19 93.6
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 36 2e-18 91.7
WERAM-Dio-0007 ENSDORP00000000987.1 Dipodomys ordii 33 3e-18 91.3
Created Date 25-Jun-2016