WERAM Information

Tag Content
WERAM ID WERAM-Loa-0003
Ensembl Protein ID ENSLAFP00000000335.4
Gene Name PRDM6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLAFG00000000396.4 ENSLAFT00000000396.4 ENSLAFP00000000335.4
ENSLAFG00000000396.4 ENSLAFT00000027759.1 ENSLAFP00000021823.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 1.90e-32 112.2 211 329
Organism Loxodonta africana
Domain Profile
  HMT RIZ
               RIZ.txt   2 evelaessipkeglgvyakkkiekgekfGPfvGekkileevee..nanekliweisedkgevkyivDasdeeksnWlryvnvArskeeq 88 
                           ev l++s++p+   g+ a+++i++g+ +GPf G    +e+v+     n++ +wei++++g+ ++++D+ +++ks+W+ry+++Ar + eq
  ENSLAFP00000000335.4 211 EVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLPPEKVQAgaVRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYIRCARHCGEQ 299
                           6789*******************************999999862257899*************************************** PP
               RIZ.txt  89 NLaalqineqifYktikdIepdeELLvwyk 118
                           NL+++q+ ++ifY+++ dI+ ++ELLvwy+
  ENSLAFP00000000335.4 300 NLTVVQYRSNIFYRACIDIPRGTELLVWYN 329
                           *****************************6 PP
Protein Sequence
(Fasta)		MLKPGDPGGS AFLKVDPVYL QHWQQLFPHR GGGGPAQGEA ASRAPLGPKP PQAANRPPPA 60
PQERAEPPPD SLPLTGLSAL PVAQLPVFAP LATATAEPLP PKDLCLGSAS GPGPVKCGGG 120
GRDGRGAQRF RCSAEELDYY LYGQQRMEII PLNQHTSDPN NRCDMCADNR NGECPMHGPL 180
HSLRRLVGTS SAAAAAPPPE LPEWLRDLPR EVCLCTSTVP GLAYGICAAQ RIQQGTWIGP 240
FQGVLLPPEK VQAGAVRNTQ HLWEIYDQDG TLQHFIDGGE PSKSSWMRYI RCARHCGEQN 300
LTVVQYRSNI FYRACIDIPR GTELLVWYND SYTSFFGIPL QCIAQDENLN VPSTVMEAMC 360
RQDSLQSFNK GSKLSPATQQ RSVVFPQTPC SRNFSLLDKS GPIESGFNQI NVKNQRVLAS 420
PTSTSQLHSE FSDWHLWKCG QCFKTFTQRI LLQMHVCTQN PDRPYQCGHC SQSFSQPSEL 480
RNHVVTHSSD RPFKCGYCGR AFAGATTLNN HIRTHTGEKP FKCERCERSF TQATQLSRHQ 540
RMPNECKPIT ESPESIEVD 559
Nucleotide Sequence
(Fasta)		ATGCTGAAGC CCGGAGACCC CGGCGGCTCG GCCTTCCTCA AAGTGGATCC AGTTTACCTA 60
CAGCACTGGC AGCAACTCTT CCCGCATAGG GGCGGTGGCG GCCCCGCTCA AGGGGAGGCA 120
GCGTCGCGGG CCCCTTTGGG CCCGAAGCCC CCTCAAGCCG CCAACCGCCC GCCGCCCGCC 180
CCGCAAGAGC GTGCCGAACC CCCGCCGGAC AGCCTGCCGC TGACCGGTCT CTCGGCCCTG 240
CCGGTAGCGC AGTTGCCAGT GTTCGCGCCT CTGGCCACCG CCACTGCGGA GCCACTGCCC 300
CCCAAGGACC TGTGTCTCGG CTCTGCCTCG GGCCCAGGGC CCGTCAAATG CGGCGGCGGC 360
GGTAGGGATG GTCGCGGTGC CCAGCGCTTC CGCTGCAGCG CGGAGGAGCT GGACTATTAC 420
CTGTACGGCC AGCAGCGCAT GGAGATCATC CCGCTCAATC AGCACACCAG CGACCCCAAC 480
AACCGCTGCG ACATGTGTGC GGACAACCGC AACGGCGAAT GCCCCATGCA CGGGCCGCTG 540
CACTCGCTGC GCCGGCTCGT GGGCACCAGC AGCGCCGCGG CTGCCGCGCC CCCGCCTGAG 600
CTGCCCGAGT GGCTGCGGGA CCTGCCCCGG GAGGTGTGCC TGTGCACTAG CACCGTGCCC 660
GGCCTGGCCT ACGGCATCTG CGCAGCGCAG AGGATTCAGC AGGGCACCTG GATCGGGCCC 720
TTCCAGGGCG TGCTCCTGCC CCCGGAGAAG GTGCAGGCGG GCGCGGTGAG GAACACGCAG 780
CATCTCTGGG AGATATATGA CCAAGATGGG ACACTACAGC ACTTTATTGA TGGTGGGGAA 840
CCTAGTAAGT CGAGCTGGAT GAGGTATATC CGATGTGCAA GGCACTGCGG AGAACAGAAT 900
CTAACAGTAG TTCAGTACAG GTCGAATATA TTCTACCGAG CCTGTATAGA TATTCCCAGG 960
GGTACCGAGC TTCTGGTGTG GTACAATGAC AGCTATACGT CTTTCTTTGG GATCCCTTTA 1020
CAATGCATTG CCCAGGATGA AAACTTAAAT GTCCCTTCAA CGGTCATGGA AGCCATGTGC 1080
AGACAAGACT CCCTGCAGTC CTTCAACAAG GGCAGCAAAC TGTCCCCGGC CACGCAGCAG 1140
CGCTCCGTCG TTTTCCCGCA GACTCCGTGC AGCAGGAACT TCTCTCTCCT GGATAAGTCT 1200
GGGCCCATCG AATCAGGATT TAACCAAATC AACGTGAAAA ACCAGCGAGT TCTTGCAAGC 1260
CCGACTTCCA CAAGCCAGCT CCACTCAGAG TTCAGTGACT GGCATCTTTG GAAATGTGGC 1320
CAGTGCTTTA AGACTTTCAC ACAGCGGATC CTCTTACAGA TGCACGTGTG TACTCAGAAC 1380
CCCGACAGAC CCTACCAGTG TGGTCACTGC TCCCAGTCCT TTTCCCAACC TTCAGAACTG 1440
AGGAACCACG TGGTCACGCA CTCTAGTGAC CGGCCTTTCA AGTGCGGCTA CTGCGGTCGC 1500
GCCTTTGCTG GGGCCACCAC CCTCAACAAC CACATCCGAA CCCACACTGG AGAAAAGCCC 1560
TTCAAGTGCG AGAGGTGTGA GAGGAGCTTC ACGCAGGCCA CCCAGCTGAG CCGACACCAG 1620
CGGATGCCCA ATGAGTGCAA GCCAATAACT GAGAGCCCAG AATCAATCGA AGTGGATTAA 1680
1681
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Paa-0150 ENSPANP00000007800.1 Papio anubis 87 0.0 925
WERAM-Gaga-0057 ENSGALP00000008574.4 Gallus gallus 82 0.0 904
WERAM-Fia-0094 ENSFALP00000007850.1 Ficedula albicollis 81 0.0 889
WERAM-Ova-0204 ENSOARP00000020272.1 Ovis aries 97 0.0 889
WERAM-Mod-0115 ENSMODP00000016775.4 Monodelphis domestica 92 0.0 876
WERAM-Sah-0097 ENSSHAP00000011079.1 Sarcophilus harrisii 93 0.0 875
WERAM-Caf-0212 ENSCAFP00000031903.3 Canis familiaris 99 0.0 873
WERAM-Ran-0169 ENSRNOP00000041369.3 Rattus norvegicus 95 0.0 872
WERAM-Mum-0220 ENSMUSP00000089513.3 Mus musculus 95 0.0 869
WERAM-Aim-0176 ENSAMEP00000016566.1 Ailuropoda melanoleuca 98 0.0 866
WERAM-Tut-0079 ENSTTRP00000006439.1 Tursiops truncatus 98 0.0 865
WERAM-Anc-0027 ENSACAP00000003308.3 Anolis carolinensis 92 0.0 835
WERAM-Mae-0109 ENSMEUP00000010466.1 Macropus eugenii 95 0.0 830
WERAM-Tag-0018 ENSTGUP00000001146.1 Taeniopygia guttata 79 0.0 827
WERAM-Sus-0105 ENSSSCP00000015146.2 Sus scrofa 91 0.0 822
WERAM-Pes-0066 ENSPSIP00000008417.1 Pelodiscus sinensis 96 0.0 818
WERAM-Caj-0182 ENSCJAP00000031870.2 Callithrix jacchus 99 0.0 806
WERAM-Eqc-0022 ENSECAP00000003259.1 Equus caballus 99 0.0 805
WERAM-Mim-0073 ENSMICP00000007053.1 Microcebus murinus 98 0.0 796
WERAM-Myl-0113 ENSMLUP00000009157.2 Myotis lucifugus 97 0.0 793
WERAM-Ocp-0043 ENSOPRP00000003686.1 Ochotona princeps 97 0.0 792
WERAM-Orn-0168 ENSONIP00000017375.1 Oreochromis niloticus 82 0.0 752
WERAM-Soa-0070 ENSSARP00000006897.1 Sorex araneus 82 0.0 637
WERAM-Pof-0242 ENSPFOP00000019968.2 Poecilia formosa 32 3e-39 160
WERAM-Dar-0018 ENSDARP00000015394.5 Danio rerio 33 5e-39 159
WERAM-Xim-0064 ENSXMAP00000005547.1 Xiphophorus maculatus 32 1e-38 158
WERAM-Asm-0083 ENSAMXP00000008799.1 Astyanax mexicanus 33 3e-38 157
WERAM-Poa-0186 ENSPPYP00000022077.1 Pongo abelii 32 5e-38 156
WERAM-Chs-0179 ENSCSAP00000010875.1 Chlorocebus sabaeus 32 6e-38 156
WERAM-Pat-0178 ENSPTRP00000036745.1 Pan troglodytes 32 6e-38 156
WERAM-Hos-0119 ENSP00000253008.2 Homo sapiens 32 6e-38 156
WERAM-Lac-0168 ENSLACP00000019977.1 Latimeria chalumnae 32 7e-38 156
WERAM-Gog-0123 ENSGGOP00000010306.2 Gorilla gorilla 33 2e-37 154
WERAM-Cap-0072 ENSCPOP00000005323.2 Cavia porcellus 33 1e-36 152
WERAM-Orla-0069 ENSORLP00000008922.1 Oryzias latipes 35 3e-35 147
WERAM-Tar-0225 ENSTRUP00000047797.1 Takifugu rubripes 35 4e-35 146
WERAM-Dan-0153 ENSDNOP00000019431.1 Dasypus novemcinctus 28 1e-34 145
WERAM-Gaa-0177 ENSGACP00000022065.1 Gasterosteus aculeatus 35 2e-34 144
WERAM-Ptv-0010 ENSPVAP00000001423.1 Pteropus vampyrus 34 3e-34 144
WERAM-Otg-0085 ENSOGAP00000006760.2 Otolemur garnettii 34 3e-34 143
WERAM-Bot-0192 ENSBTAP00000032579.2 Bos taurus 34 4e-34 143
WERAM-Orc-0078 ENSOCUP00000007120.2 Oryctolagus cuniculus 35 4e-34 143
WERAM-Ict-0060 ENSSTOP00000005349.2 Ictidomys tridecemlineatus 34 4e-34 143
WERAM-Gam-0121 ENSGMOP00000012620.1 Gadus morhua 34 4e-34 143
WERAM-Meg-0059 ENSMGAP00000005346.1 Meleagris gallopavo 34 1e-33 141
WERAM-Fec-0217 ENSFCAP00000016661.1 Felis catus 34 2e-33 141
WERAM-Anp-0104 ENSAPLP00000012181.1 Anas platyrhynchos 34 2e-33 140
WERAM-Ten-0104 ENSTNIP00000011876.1 Tetraodon nigroviridis 34 4e-33 140
WERAM-Leo-0047 ENSLOCP00000006545.1 Lepisosteus oculatus 34 5e-33 139
WERAM-Mam-0029 ENSMMUP00000005026.2 Macaca mulatta 27 2e-32 138
WERAM-Mup-0081 ENSMPUP00000007423.1 Mustela putorius furo 28 8e-32 135
WERAM-Ect-0066 ENSETEP00000007192.1 Echinops telfairi 45 4e-30 130
WERAM-Nol-0140 ENSNLEP00000015220.1 Nomascus leucogenys 45 4e-30 130
WERAM-Xet-0008 ENSXETP00000002850.3 Xenopus tropicalis 45 7e-29 126
WERAM-Chh-0045 ENSCHOP00000005073.1 Choloepus hoffmanni 30 1e-28 125
WERAM-Dio-0007 ENSDORP00000000987.1 Dipodomys ordii 30 2e-28 124
WERAM-Tub-0069 ENSTBEP00000008639.1 Tupaia belangeri 27 3e-28 124
WERAM-Ora-0122 ENSOANP00000023793.3 Ornithorhynchus anatinus 27 1e-21 102
WERAM-Vip-0075 ENSVPAP00000006917.1 Vicugna pacos 26 2e-20 98.2
WERAM-Prc-0123 ENSPCAP00000010913.1 Procavia capensis 38 7e-20 96.3
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 34 2e-19 94.7
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 37 3e-19 94.0
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 28 2e-18 91.7
Created Date 25-Jun-2016