WERAM Information

Tag Content
WERAM ID WERAM-Cae-0025
Ensembl Protein ID C41G7.1a
Gene Name smn-1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00004887 C41G7.1a C41G7.1a
WBGene00004887 C41G7.1b C41G7.1b
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 0.021 15.7 47 127
Organism Caenorhabditis elegans
Domain Profile
  Me_Reader Tudor
  Tudor.txt   2 skvGlrVvakwssdG..yfYsgki.............................................Vvkghrvesgee 35 
                +kvG +++a ++++G  + Y+++i                                             ++k++++++ ++
   C41G7.1a  47 WKVGGKCMAPYEENGevTDYPATIdtiggadnlevgvtfiyyggqavvqmkdlwlneeaiadavkaendLQKTKKTSTVNS 127
                9**************9999*****888888888888888888888888888888888888888888888777777776665 PP
Protein Sequence
(Fasta)		MEVDDVWDDT ELIKMYDESL QEISKNETSA KITSRKFKGE DGKMYTWKVG GKCMAPYEEN 60
GEVTDYPATI DTIGGADNLE VGVTFIYYGG QAVVQMKDLW LNEEAIADAV KAENDLQKTK 120
KTSTVNSVAH SNSKSTSSAP NTSMPFPSFA PPVPPNIIAM APVNQKEAMN SMLMSWYMSG 180
YHTGYYQALA DQKNVQN 197
Nucleotide Sequence
(Fasta)		GGCGACATGG AGGTAGACGA TGTTTGGGAT GATACGGAGC TAATCAAAAT GTATGATGAA 60
TCGCTTCAAG AAATTTCTAA AAATGAGACA TCTGCTAAAA TTACTTCAAG AAAATTCAAA 120
GGAGAAGATG GAAAAATGTA CACATGGAAA GTTGGTGGGA AATGTATGGC TCCATATGAA 180
GAAAACGGGG AGGTCACTGA TTATCCTGCA ACAATTGATA CTATTGGAGG TGCTGATAAT 240
CTCGAAGTTG GAGTTACTTT CATTTATTAT GGAGGTCAAG CAGTTGTACA AATGAAAGAT 300
CTCTGGTTGA ATGAAGAAGC TATTGCGGAC GCTGTGAAAG CTGAAAATGA TCTTCAAAAG 360
ACAAAAAAGA CATCAACTGT AAATTCAGTA GCACATTCAA ATTCAAAATC TACCTCATCT 420
GCACCAAATA CCTCGATGCC ATTTCCATCC TTCGCACCGC CAGTTCCTCC AAACATAATC 480
GCAATGGCCC CTGTTAATCA GAAAGAAGCC ATGAACAGTA TGCTTATGAG CTGGTACATG 540
AGCGGATATC ATACAGGATA CTATCAAGCA CTAGCGGATC AGAAAAATGT TCAAAATTAA 600
TTCATCGCTC TTATTTGTTT TTTTGCTAAT TTCCTACATT TCGAAGTTTT CTCACTCCAT 660
TCCTCCCGGG TGTTTATAAA TGATTAATAT GAA 694
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Gog-0039 ENSGGOP00000003799.2 Gorilla gorilla 32 3e-13 72.0
WERAM-Orla-0110 ENSORLP00000013230.1 Oryzias latipes 29 1e-11 66.6
WERAM-Gaga-0023 ENSGALP00000003813.3 Gallus gallus 28 9e-11 63.9
WERAM-Gam-0194 ENSGMOP00000018574.1 Gadus morhua 25 4e-10 61.6
WERAM-Gaa-0108 ENSGACP00000014003.1 Gasterosteus aculeatus 26 2e-09 59.7
WERAM-Anc-0104 ENSACAP00000009875.2 Anolis carolinensis 28 2e-08 56.2
WERAM-Ere-0139 ENSEEUP00000014406.1 Erinaceus europaeus 29 7e-08 54.3
WERAM-Aim-0044 ENSAMEP00000003514.1 Ailuropoda melanoleuca 31 8e-08 53.9
WERAM-Poa-0178 ENSPPYP00000021497.1 Pongo abelii 31 1e-07 53.5
WERAM-Mup-0166 ENSMPUP00000014360.1 Mustela putorius furo 29 1e-07 53.1
WERAM-Mum-0038 ENSMUSP00000022147.8 Mus musculus 31 2e-07 52.8
WERAM-Caf-0088 ENSCAFP00000011560.3 Canis familiaris 30 3e-07 52.4
WERAM-Paa-0095 ENSPANP00000003940.1 Papio anubis 32 4e-07 51.6
WERAM-Orc-0164 ENSOCUP00000014693.2 Oryctolagus cuniculus 29 5e-07 51.6
WERAM-Mam-0188 ENSMMUP00000026612.2 Macaca mulatta 32 5e-07 51.6
WERAM-Ocp-0020 ENSOPRP00000001850.1 Ochotona princeps 35 7e-07 51.2
WERAM-Tut-0062 ENSTTRP00000004775.1 Tursiops truncatus 29 9e-07 50.8
WERAM-Pat-0137 ENSPTRP00000029048.4 Pan troglodytes 32 1e-06 50.4
WERAM-Nol-0044 ENSNLEP00000005396.1 Nomascus leucogenys 32 1e-06 50.4
WERAM-Hos-0271 ENSP00000483819.1 Homo sapiens 32 1e-06 50.4
WERAM-Caj-0170 ENSCJAP00000015046.2 Callithrix jacchus 33 1e-06 50.4
WERAM-Myl-0120 ENSMLUP00000009660.2 Myotis lucifugus 28 1e-06 50.4
WERAM-Pem-0048 ENSPMAP00000005497.1 Petromyzon marinus 58 1e-06 50.4
WERAM-Asm-0149 ENSAMXP00000014288.1 Astyanax mexicanus 27 1e-06 50.4
WERAM-Ptv-0052 ENSPVAP00000005647.1 Pteropus vampyrus 28 2e-06 49.7
WERAM-Chh-0057 ENSCHOP00000006505.1 Choloepus hoffmanni 29 2e-06 49.3
WERAM-Chs-0190 ENSCSAP00000011744.1 Chlorocebus sabaeus 30 2e-06 49.3
WERAM-Ict-0106 ENSSTOP00000011013.2 Ictidomys tridecemlineatus 29 3e-06 48.9
WERAM-Ova-0048 ENSOARP00000005820.1 Ovis aries 31 3e-06 48.5
WERAM-Fec-0184 ENSFCAP00000019138.1 Felis catus 30 4e-06 48.5
WERAM-Xet-0114 ENSXETP00000039449.3 Xenopus tropicalis 28 8e-06 47.4
WERAM-Tub-0020 ENSTBEP00000002061.1 Tupaia belangeri 35 8e-06 47.4
Created Date 25-Jun-2016