WERAM Information

Tag Content
WERAM ID WERAM-Brr-0187
Ensembl Protein ID Bra037394.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra037394 Bra037394.1 Bra037394.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 2.10e-65 221.3 458 839
Organism Brassica rapa
Domain Profile
  HDM JHDM2
      JHDM2.txt   5 rdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvyvgilkkk.waeedlkellksieeeeldevtrkrvqdpkek 99 
                      g +NLa++lp+ +++pdlgPk+y AyG+ +e +r++++t+lh+dvsdavn+l++      +  + +++k  +ks+++ +l + + k+   ++++
  Bra037394.1-P 458 ESGIFNLATRLPDGSLKPDLGPKTYIAYGFHEELNRGDSVTKLHCDVSDAVNVLTHTAKVDLTpRQYQKIKLEQKSYAKAQLRKQQ-KNKSLGEVD 552
                    46889***************************************************777666623334444445566666553333.333344555 PP
      JHDM2.txt 100 pgalWhifaakdaekirellekvsk 124
                    +  +  i +++d +  + ll ++s 
  Bra037394.1-P 553 KDEIILIENEEDLKNCNGLLGEHSL 577
                    5666777788888888888877765 PP
      JHDM2.txt  95 dpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlipagapHqvqnlks 186
                       ++ ga+W+if+++d++k+ e+l+++++e+++    +v+++ +pihdqs++l++ ++k+L+ee+ +e+wt+vQ lg+av+ipag+pHqv+n++s
  Bra037394.1-P 719 TKAVHGGAVWDIFRREDVPKLIEYLKRHKHEFRHlynePVKSVSHPIHDQSMFLNERQKKQLKEEFDIEPWTFVQHLGEAVFIPAGCPHQVRNIQS 814
                    3345679**************************99988888899**************************************************** PP
      JHDM2.txt 187 cvkvaedFvsPEnvkecfrltkeyr 211
                    c+kva dFv PE v+ec+rlt+e+r
  Bra037394.1-P 815 CIKVALDFVAPESVEECLRLTEEFR 839
                    ***********************98 PP
Protein Sequence
(Fasta)		MEERKGKRIR SEEDPPRSSD KRRKTRKKEE ENVVSRRGSS SSEGRRRGRD MSSSPDKDES 60
EGRRKYAGLT CHQCKIMMSS KTDLVFCSIC VNKRYCKDCI KRWYPERTPE GVKAACPFCM 120
GNCNCRACLR EPLAVKIQSG KDDNVKLKQL QYLLVKVLPV LRAIYTEQSR ELEIEAAIRG 180
VPVTESDVAK CEIHPSVRIY CDLCSTSIAN FLRSCQNQDC SSDICLSCCN ELRDGESFSS 240
WKLNSDGTIP CPPKERGGCG TSTLELRRLR KRDLVQKLIT DAEELTQQFK PPDVDTAHEC 300
SSCSDSITRQ AASRKNGHDN FLYSPTALDL AEDDNAHFQS HWIKAEPVIV RNVLEKTSGL 360
SWEPMVMWRA CREMDPKAKC KGEAKAVKAV DCLDWCEVEI NIHQFFDGYL KGRMHCNGWP 420
EMLKLKDWPP SALFEERLPR HNDEFMSALP FFDYTDPESG IFNLATRLPD GSLKPDLGPK 480
TYIAYGFHEE LNRGDSVTKL HCDVSDAVNV LTHTAKVDLT PRQYQKIKLE QKSYAKAQLR 540
KQQKNKSLGE VDKDEIILIE NEEDLKNCNG LLGEHSLKDK AAKEESSYSI PGPSSSQKGE 600
CINIGRADDP KEGSSSLNSC TVAMESGHDT KVDVGLITQK NVTVKRESVA DENHDDVCLK 660
TEISSPSQRE ADSAVENELN MPTLPSTLPQ PVVSTSAESI EEEKLDAPIE TNGNANESTK 720
AVHGGAVWDI FRREDVPKLI EYLKRHKHEF RHLYNEPVKS VSHPIHDQSM FLNERQKKQL 780
KEEFDIEPWT FVQHLGEAVF IPAGCPHQVR NIQSCIKVAL DFVAPESVEE CLRLTEEFRR 840
LPKDHKSNED KLELKKIVLH AARSAIREAQ DLMQTKTVTK DRKGSST 887
Nucleotide Sequence
(Fasta)		ATGGAGGAAA GGAAGGGTAA GCGAATTAGG TCCGAGGAAG ACCCCCCGAG ATCTTCTGAC 60
AAGCGACGTA AGACGAGGAA GAAGGAAGAG GAGAATGTCG TGAGCAGAAG AGGATCTTCG 120
AGTTCTGAGG GAAGAAGAAG AGGAAGAGAC ATGTCTTCTT CACCCGACAA GGATGAGTCT 180
GAAGGAAGAA GAAAGTATGC TGGTTTGACT TGTCATCAGT GTAAGATCAT GATGAGTAGT 240
AAGACTGATC TTGTCTTCTG TTCAATATGT GTCAATAAGC GCTACTGCAA GGACTGCATC 300
AAGAGATGGT ATCCAGAGAG AACGCCTGAG GGAGTTAAAG CTGCTTGTCC TTTCTGTATG 360
GGGAATTGCA ACTGCAGAGC TTGTCTGCGA GAGCCTTTGG CTGTCAAGAT ACAAAGTGGA 420
AAGGATGATA ATGTCAAGCT CAAGCAGTTG CAGTACCTAT TAGTTAAAGT CCTTCCTGTT 480
CTTAGGGCTA TTTACACTGA GCAAAGCCGT GAACTTGAGA TTGAAGCAGC GATTAGAGGA 540
GTGCCTGTGA CAGAATCTGA TGTTGCTAAG TGCGAGATTC ATCCAAGTGT ACGCATATAC 600
TGTGACCTCT GCAGCACATC CATTGCCAAT TTTCTCAGAA GCTGTCAGAA CCAAGATTGT 660
TCATCAGACA TATGTCTCTC TTGCTGCAAT GAACTGAGAG ATGGGGAGAG TTTCTCTAGC 720
TGGAAGCTTA ACTCTGACGG TACCATTCCC TGCCCTCCAA AGGAACGTGG TGGTTGTGGT 780
ACCTCAACAC TGGAGTTGAG ACGTTTGCGC AAACGTGATT TGGTCCAAAA ACTGATAACC 840
GATGCAGAGG AACTTACTCA ACAGTTTAAA CCACCGGATG TGGATACTGC TCATGAATGT 900
TCCTCATGTT CTGATTCCAT TACAAGGCAG GCGGCTTCTA GGAAGAACGG TCATGATAAC 960
TTCTTATACT CCCCAACCGC TCTTGATCTA GCTGAAGACG ACAATGCTCA TTTTCAGTCG 1020
CATTGGATAA AGGCAGAGCC TGTTATAGTC AGAAACGTTC TGGAGAAGAC GTCTGGACTA 1080
AGCTGGGAGC CAATGGTTAT GTGGAGAGCC TGTAGAGAAA TGGATCCAAA GGCTAAATGC 1140
AAAGGAGAGG CCAAAGCTGT GAAGGCTGTG GATTGCTTGG ACTGGTGTGA GGTTGAGATA 1200
AACATTCATC AGTTTTTCGA TGGCTACTTA AAAGGGAGAA TGCATTGCAA CGGTTGGCCA 1260
GAGATGTTGA AACTGAAGGA TTGGCCTCCA TCAGCTTTGT TTGAAGAGCG TCTTCCAAGG 1320
CATAATGATG AGTTTATGTC TGCGTTGCCT TTCTTTGATT ACACTGATCC AGAGTCTGGT 1380
ATCTTCAATC TTGCAACAAG ACTTCCAGAT GGATCCTTGA AGCCAGATCT TGGACCAAAG 1440
ACATATATTG CTTATGGTTT CCATGAAGAG CTTAATAGAG GAGACTCTGT GACAAAGCTA 1500
CATTGTGATG TTTCTGACGC GGTGAATGTG CTGACACACA CTGCTAAAGT GGATTTAACT 1560
CCCAGACAAT ACCAAAAGAT AAAATTAGAA CAGAAAAGCT ACGCAAAAGC ACAATTGCGT 1620
AAACAACAGA AAAACAAGTC ACTGGGAGAA GTGGATAAAG ATGAAATAAT CTTGATTGAG 1680
AATGAGGAAG ATTTAAAGAA TTGCAATGGT CTTTTGGGGG AACACAGCTT GAAGGATAAA 1740
GCAGCTAAGG AAGAATCATC ATATAGCATT CCTGGACCGT CCAGCTCACA AAAAGGTGAA 1800
TGTATTAACA TTGGAAGAGC TGATGATCCT AAGGAAGGAT CTTCTAGTTT GAATTCTTGC 1860
ACTGTTGCTA TGGAGTCAGG TCATGATACA AAGGTGGATG TGGGTTTGAT AACTCAGAAG 1920
AATGTAACAG TGAAACGCGA ATCAGTTGCT GACGAGAATC ATGATGATGT CTGTTTGAAG 1980
ACAGAGATAT CATCTCCAAG TCAAAGAGAA GCTGATTCCG CGGTGGAGAA TGAACTAAAC 2040
ATGCCAACAC TTCCTTCTAC TCTTCCACAA CCTGTTGTGA GTACAAGTGC GGAATCCATA 2100
GAAGAGGAGA AACTAGATGC TCCAATAGAA ACTAATGGCA ATGCCAATGA GAGTACAAAG 2160
GCTGTGCATG GTGGTGCTGT GTGGGACATC TTCCGAAGAG AGGATGTTCC AAAACTTATC 2220
GAGTATTTGA AAAGGCACAA GCATGAGTTT CGTCACCTCT ATAACGAACC TGTGAAATCT 2280
GTGTCACACC CAATTCATGA CCAGAGTATG TTCTTGAATG AAAGACAGAA GAAACAGCTG 2340
AAGGAGGAGT TTGATATAGA ACCATGGACC TTTGTGCAAC ACCTCGGTGA AGCTGTCTTT 2400
ATCCCTGCCG GTTGTCCTCA CCAAGTGAGG AACATACAGT CTTGCATAAA GGTGGCATTA 2460
GATTTTGTTG CTCCTGAAAG CGTAGAGGAA TGCCTTAGGC TAACAGAGGA GTTCCGGAGA 2520
CTACCTAAAG ACCACAAATC CAACGAAGAT AAACTAGAGC TTAAGAAAAT AGTGCTGCAT 2580
GCTGCCAGAT CGGCCATAAG AGAGGCACAA GATCTAATGC AAACAAAGAC GGTAACAAAA 2640
GACCGAAAAG GTTCTTCAAC TTAG 2665
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0165 Bo9g003800.1 Brassica oleracea 89 0.0 1466
WERAM-Arl-0098 fgenesh2_kg.6__ 3604__ AT4G00990.1 Arabidopsis lyrata 63 0.0 734
WERAM-Art-0095 AT4G00990.1 Arabidopsis thaliana 63 0.0 724
WERAM-Thc-0124 EOX95689 Theobroma cacao 54 1e-170 597
WERAM-Aet-0028 EMT26740 Aegilops tauschii 42 3e-166 583
WERAM-Tra-0032 Traes_1DS_20D6E2B0D.1 Triticum aestivum 42 4e-166 583
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 40 2e-163 574
WERAM-Viv-0094 VIT_15s0046g00340.t01 Vitis vinifera 54 4e-162 569
WERAM-Met-0165 KEH24644 Medicago truncatula 55 1e-158 557
WERAM-Lep-0019 LPERR02G00580.1 Leersia perrieri 40 6e-153 539
WERAM-Sob-0062 Sb04g000775.1 Sorghum bicolor 41 3e-149 526
WERAM-Prp-0006 EMJ21777 Prunus persica 51 8e-146 515
WERAM-Glm-0182 GLYMA14G26015.1 Glycine max 54 2e-145 514
WERAM-Pot-0147 POPTR_0015s01510.1 Populus trichocarpa 54 4e-144 509
WERAM-Amt-0026 ERN14091 Amborella trichopoda 50 2e-134 477
WERAM-Sol-0046 Solyc03g083240.2.1 Solanum lycopersicum 49 2e-129 461
WERAM-Mua-0058 GSMUA_Achr3P14190_001 Musa acuminata 51 6e-129 459
WERAM-Sot-0039 PGSC0003DMT400035505 Solanum tuberosum 49 8e-123 439
WERAM-Org-0037 ORGLA03G0207400.1 Oryza glaberrima 44 2e-122 437
WERAM-Ori-0043 BGIOSGA012927-PA Oryza indica 44 6e-122 436
WERAM-Brd-0103 BRADI4G27417.1 Brachypodium distachyon 44 1e-120 432
WERAM-Orgl-0039 OGLUM03G23040.1 Oryza glumaepatula 43 3e-119 427
WERAM-Orl-0076 KN539615.1_FGP001 Oryza longistaminata 43 8e-119 425
WERAM-Orb-0037 OBART03G22260.1 Oryza barthii 43 7e-118 422
WERAM-Orni-0109 ONIVA10G14230.1 Oryza nivara 43 3e-117 420
WERAM-Orbr-0035 OB02G45020.1 Oryza brachyantha 45 2e-116 417
WERAM-Ors-0026 OS02T0828900-01 Oryza sativa 44 7e-115 412
WERAM-Orp-0036 OPUNC03G20970.1 Oryza punctata 42 2e-113 408
WERAM-Orm-0031 OMERI02G35990.1 Oryza meridionalis 44 3e-111 400
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 43 8e-111 399
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 42 1e-110 398
WERAM-Orr-0016 ORUFI02G00790.1 Oryza rufipogon 41 2e-106 384
WERAM-Sei-0062 Si016268m Setaria italica 42 1e-98 358
WERAM-Tru-0016 TRIUR3_07101-P1 Triticum urartu 48 3e-91 334
WERAM-Tub-0003 ENSTBEP00000000295.1 Tupaia belangeri 47 8e-35 146
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 47 1e-34 145
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 47 1e-34 145
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 47 1e-34 145
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 47 1e-34 145
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 47 1e-34 145
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 47 1e-34 145
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 47 1e-34 145
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 47 1e-34 145
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 47 2e-34 145
WERAM-Ere-0095 ENSEEUP00000009792.1 Erinaceus europaeus 47 2e-34 145
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 47 2e-34 145
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 47 2e-34 145
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 47 2e-34 145
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 47 2e-34 145
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 47 2e-34 145
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 47 2e-34 145
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 47 2e-34 145
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 47 2e-34 145
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 47 2e-34 145
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 47 2e-34 145
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 47 2e-34 145
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 47 2e-34 145
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 47 2e-34 145
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 47 2e-34 145
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 47 2e-34 145
WERAM-Pof-0098 ENSPFOP00000008824.2 Poecilia formosa 49 2e-34 145
WERAM-Soa-0091 ENSSARP00000008521.1 Sorex araneus 47 2e-34 145
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 47 2e-34 145
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 47 2e-34 145
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 45 2e-34 145
WERAM-Mae-0023 ENSMEUP00000001666.1 Macropus eugenii 47 3e-34 144
WERAM-Mum-0157 ENSMUSP00000037628.7 Mus musculus 47 4e-34 144
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 46 4e-34 144
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 44 4e-34 144
WERAM-Ran-0218 ENSRNOP00000067649.2 Rattus norvegicus 47 4e-34 144
WERAM-Xet-0043 ENSXETP00000014664.3 Xenopus tropicalis 45 4e-34 144
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 47 5e-34 144
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 44 5e-34 144
WERAM-Lac-0170 ENSLACP00000020024.1 Latimeria chalumnae 46 8e-34 143
WERAM-Xim-0102 ENSXMAP00000009010.1 Xiphophorus maculatus 48 1e-33 142
WERAM-Gaga-0080 ENSGALP00000012399.4 Gallus gallus 46 1e-33 142
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 46 1e-33 142
Created Date 25-Jun-2016