WERAM Information

Tag Content
WERAM ID WERAM-Sob-0062
Ensembl Protein ID Sb04g000775.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb04g000775 Sb04g000775.1 Sb04g000775.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 2.30e-70 237.3 372 733
Organism Sorghum bicolor
Domain Profile
  HDM JHDM2
      JHDM2.txt   5 rdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvyvgilkkkwaeedlkel 76 
                    + g+lNLa+klpk + +pdlgPk+y AyG+++e + ++++t+lh+d+sdavnil++ +  k k ++    ++
  Sb04g000775.1 372 KCGPLNLAVKLPKGVNKPDLGPKTYIAYGVSKELGIGDSVTKLHCDMSDAVNILTHTDEIKLKAKRIA--AV 441
                    459*****************************************************887776654433..23 PP
      JHDM2.txt  97 kekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlipagapHqvqnlkscv 188
                    + + galW+if+++d+ k++++l k+  e+++     v+++ +pihdq +yl+++++++L+eeyG+e+wt+ Qklg+av+ipag+pHqv+nlksc+
  Sb04g000775.1 615 QAEGGALWDIFRREDVSKLHDYLMKHADEFRHcnfeTVKQVTHPIHDQCFYLTNEHKRKLKEEYGIEPWTFEQKLGEAVFIPAGCPHQVRNLKSCI 710
                    45679**************************9999889999******************************************************* PP
      JHDM2.txt 189 kvaedFvsPEnvkecfrltkeyr 211
                    kva dFvsPEnv ec+rlt+++r
  Sb04g000775.1 711 KVALDFVSPENVRECIRLTEQFR 733
                    *********************98 PP
Protein Sequence
(Fasta)		TEGYSVSEQD KIQFSMRIVR FLLPWLKEFH QEQMQEKSAE AATKGIDAGK LEVPLTICGK 60
NERIYCDNCR TSIVDFHRTC NKCNYDLCLR CCRELRRGLV PGNGVKVDGG GKEDLQLGVS 120
HDKIVSKGPS DGQNGMLIDS VVPADKSTSS LREWSVNNDG TIPCPPNAFG GCGSSLLELK 180
CLFEETFIAE LLEKANSAVN NGMEVKMEGS KCSCFTESGD IDDGISRKTA CRENSCDNYI 240
YCPTATDVQN GSLDHFQEHW LKGEPVIVRD TLALTSGLSW EPMVMWRALR EKRDKVERLS 300
VLALECLGWC EVDVNIHMFF AGYSRGLVGP DDLPLLLKLK DWPPHSSFEE RLPRHGAEFM 360
SALPFREYTD PKCGPLNLAV KLPKGVNKPD LGPKTYIAYG VSKELGIGDS VTKLHCDMSD 420
AVNILTHTDE IKLKAKRIAA VEKKKQCLEM KSLSTKEASG DLQWHADFAS IPAVLSESNK 480
EPRPEEFGNE LGIKQPVQHV ASEEQEGVQD DAKADANDMN VSFDKGKSED SFGTINGRKN 540
AGDGVNSGDK IESPSGLAER TLAKPTTKGC SKQRGRDSSN ARGNRNKRTE EENVPGLITV 600
APESEDETPF VDGNQAEGGA LWDIFRREDV SKLHDYLMKH ADEFRHCNFE TVKQVTHPIH 660
DQCFYLTNEH KRKLKEEYGI EPWTFEQKLG EAVFIPAGCP HQVRNLKSCI KVALDFVSPE 720
NVRECIRLTE QFRLLPKWHR VNEDKLEVKK IALHALNQAI KDISDESSNS NE 772
Nucleotide Sequence
(Fasta)		ACTGAAGGAT ATAGTGTATC TGAACAAGAT AAAATTCAAT TCTCTATGCG TATCGTGCGC 60
TTTTTGCTCC CTTGGCTGAA AGAATTCCAC CAAGAGCAGA TGCAAGAGAA AAGTGCTGAG 120
GCTGCAACTA AAGGGATTGA TGCAGGCAAA CTAGAGGTCC CTCTAACCAT TTGTGGAAAA 180
AATGAACGGA TATACTGTGA CAACTGCAGG ACATCTATTG TTGACTTCCA CAGAACCTGC 240
AATAAATGTA ACTATGATCT CTGCCTCCGG TGCTGCCGGG AGCTTCGTCG AGGCCTTGTT 300
CCTGGTAATG GTGTCAAGGT TGATGGTGGA GGCAAGGAAG ATTTGCAATT GGGAGTTAGT 360
CATGATAAAA TTGTAAGTAA AGGGCCATCT GATGGACAGA ATGGCATGTT AATAGATAGT 420
GTAGTTCCTG CTGACAAGAG CACTTCTAGC TTGAGAGAGT GGAGTGTGAA TAACGATGGA 480
ACCATACCTT GCCCACCAAA TGCATTTGGT GGTTGTGGGA GCTCTCTTCT TGAACTTAAG 540
TGCTTGTTCG AAGAGACGTT TATTGCTGAA TTACTGGAGA AGGCCAATTC AGCGGTCAAT 600
AATGGAATGG AGGTGAAGAT GGAAGGATCA AAATGTTCCT GCTTCACTGA ATCCGGTGAC 660
ATAGATGATG GTATATCGCG GAAAACAGCT TGCAGAGAGA ATTCCTGTGA TAACTACATA 720
TATTGCCCAA CCGCTACTGA TGTCCAAAAT GGAAGTTTAG ATCATTTCCA GGAGCATTGG 780
TTGAAGGGTG AACCTGTAAT TGTCCGTGAT ACGCTTGCAT TGACTTCTGG ATTAAGCTGG 840
GAACCGATGG TTATGTGGCG CGCCTTACGA GAAAAGAGAG ACAAAGTTGA GAGGCTCTCA 900
GTTCTTGCTC TTGAATGCTT GGGTTGGTGT GAGGTTGATG TAAATATTCA TATGTTTTTT 960
GCGGGGTATT CACGTGGGCT TGTTGGTCCA GACGATTTGC CTCTGTTACT TAAGCTTAAA 1020
GATTGGCCAC CACATAGTTC TTTTGAGGAG CGGCTGCCAA GACATGGTGC AGAGTTTATG 1080
TCTGCGTTGC CATTTCGCGA ATACACAGAT CCTAAATGTG GTCCTCTTAA TCTGGCAGTA 1140
AAGCTTCCCA AGGGTGTTAA TAAGCCAGAC CTTGGTCCAA AGACTTATAT TGCATATGGT 1200
GTTTCCAAAG AGTTGGGAAT TGGTGATTCT GTCACCAAGC TTCACTGCGA TATGTCTGAT 1260
GCGGTGAATA TCCTCACACA TACTGATGAA ATAAAACTCA AAGCAAAAAG GATTGCAGCA 1320
GTGGAAAAGA AGAAGCAGTG TTTAGAAATG AAGAGTCTAT CTACCAAGGA AGCAAGTGGT 1380
GACCTTCAAT GGCATGCAGA TTTTGCTAGT ATTCCAGCAG TTCTCAGTGA ATCTAACAAG 1440
GAGCCAAGGC CTGAAGAGTT TGGAAATGAG TTGGGCATTA AACAGCCAGT ACAACATGTT 1500
GCTTCTGAGG AGCAGGAAGG AGTTCAAGAT GATGCCAAGG CTGATGCAAA TGATATGAAT 1560
GTTTCTTTTG ATAAGGGGAA ATCAGAAGAT TCTTTTGGCA CAATTAATGG TAGAAAAAAT 1620
GCTGGTGATG GTGTCAACAG TGGAGATAAA ATTGAATCTC CTAGTGGTTT AGCAGAAAGA 1680
ACATTGGCTA AACCTACCAC TAAGGGATGC AGTAAGCAGC GTGGCCGTGA TTCTTCTAAT 1740
GCAAGAGGGA ACAGGAATAA AAGAACAGAA GAGGAAAATG TGCCTGGATT GATTACCGTG 1800
GCTCCTGAGT CAGAAGATGA GACCCCATTT GTAGATGGAA ACCAAGCAGA GGGTGGTGCA 1860
TTGTGGGATA TTTTCCGACG GGAAGATGTG AGCAAACTAC ATGATTATCT AATGAAACAT 1920
GCAGACGAGT TTAGGCATTG CAACTTTGAG ACAGTGAAGC AGGTTACTCA TCCTATACAT 1980
GATCAGTGTT TTTATCTAAC AAATGAGCAC AAGAGAAAGC TTAAGGAAGA ATATGGAATT 2040
GAGCCTTGGA CATTTGAACA GAAGCTAGGT GAGGCAGTAT TTATTCCAGC AGGATGTCCC 2100
CACCAGGTTA GAAATTTGAA GTCTTGCATA AAGGTTGCAC TTGACTTTGT TTCTCCGGAG 2160
AATGTGAGAG AGTGCATCAG GTTAACAGAA CAATTCCGTC TGCTTCCGAA GTGGCATAGG 2220
GTGAATGAAG ATAAATTGGA GGTTAAGAAG ATAGCTCTTC ATGCACTCAA TCAAGCGATT 2280
AAAGATATCT CTGATGAATC ATCTAATAGC AACGAA 2317
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0041 GRMZM2G054162_P01 Zea mays 88 0.0 1332
WERAM-Sei-0062 Si016268m Setaria italica 67 0.0 947
WERAM-Orni-0087 ONIVA08G02050.1 Oryza nivara 64 0.0 939
WERAM-Ori-0020 BGIOSGA007275-PA Oryza indica 64 0.0 939
WERAM-Orm-0018 OMERI02G00250.1 Oryza meridionalis 64 0.0 938
WERAM-Orr-0016 ORUFI02G00790.1 Oryza rufipogon 64 0.0 937
WERAM-Orgl-0017 OGLUM02G00660.1 Oryza glumaepatula 64 0.0 937
WERAM-Orb-0016 OBART02G00740.1 Oryza barthii 64 0.0 937
WERAM-Orp-0017 OPUNC02G00280.1 Oryza punctata 64 0.0 918
WERAM-Org-0016 ORGLA02G0006900.1 Oryza glaberrima 62 0.0 915
WERAM-Brd-0062 BRADI3G01060.1 Brachypodium distachyon 62 0.0 907
WERAM-Orbr-0020 OB02G10630.1 Oryza brachyantha 61 0.0 893
WERAM-Tra-0279 Traes_6DS_BF9884650.1 Triticum aestivum 60 0.0 891
WERAM-Lep-0019 LPERR02G00580.1 Leersia perrieri 61 0.0 880
WERAM-Aet-0029 EMT12717 Aegilops tauschii 58 0.0 850
WERAM-Tru-0016 TRIUR3_07101-P1 Triticum urartu 55 0.0 844
WERAM-Ors-0026 OS02T0828900-01 Oryza sativa 47 0.0 642
WERAM-Mua-0068 GSMUA_Achr4P05350_001 Musa acuminata 47 0.0 636
WERAM-Hov-0005 MLOC_11348.2 Hordeum vulgare 58 3e-179 626
WERAM-Orl-0018 KN538711.1_FGP007 Oryza longistaminata 45 9e-167 584
WERAM-Prp-0116 EMJ12151 Prunus persica 46 1e-166 584
WERAM-Glm-0245 GLYMA19G12090.1 Glycine max 45 1e-161 567
WERAM-Thc-0027 EOX99098 Theobroma cacao 44 4e-160 562
WERAM-Viv-0094 VIT_15s0046g00340.t01 Vitis vinifera 44 4e-159 559
WERAM-Met-0165 KEH24644 Medicago truncatula 44 2e-155 546
WERAM-Sol-0046 Solyc03g083240.2.1 Solanum lycopersicum 42 2e-148 523
WERAM-Amt-0077 ERM98415 Amborella trichopoda 41 8e-146 514
WERAM-Art-0095 AT4G00990.1 Arabidopsis thaliana 42 2e-144 510
WERAM-Brr-0187 Bra037394.1-P Brassica rapa 46 4e-139 493
WERAM-Bro-0165 Bo9g003800.1 Brassica oleracea 45 8e-136 481
WERAM-Sot-0039 PGSC0003DMT400035505 Solanum tuberosum 45 6e-94 342
WERAM-Arl-0042 fgenesh2_kg.1__ 1301__ AT1G11950.1 Arabidopsis lyrata 45 5e-91 333
WERAM-Pot-0063 POPTR_0005s09360.1 Populus trichocarpa 46 8e-90 329
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 44 2e-85 314
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 51 5e-35 147
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 51 8e-35 146
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 52 9e-35 146
WERAM-Pof-0098 ENSPFOP00000008824.2 Poecilia formosa 51 1e-34 146
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 51 1e-34 145
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 49 1e-34 145
WERAM-Xim-0102 ENSXMAP00000009010.1 Xiphophorus maculatus 51 1e-34 145
WERAM-Orla-0053 ENSORLP00000006841.1 Oryzias latipes 51 2e-34 145
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 50 3e-34 144
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 50 4e-34 144
WERAM-Tub-0003 ENSTBEP00000000295.1 Tupaia belangeri 50 4e-34 144
WERAM-Ora-0091 ENSOANP00000016437.2 Ornithorhynchus anatinus 46 5e-34 144
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 49 5e-34 143
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 50 8e-34 143
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 50 8e-34 143
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 50 9e-34 142
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 50 9e-34 142
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 50 9e-34 142
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 50 9e-34 142
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 50 9e-34 142
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 50 9e-34 142
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 50 9e-34 142
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 50 1e-33 142
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 49 1e-33 142
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 50 1e-33 142
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 50 1e-33 142
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 50 1e-33 142
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 50 1e-33 142
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 50 1e-33 142
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 50 1e-33 142
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 50 1e-33 142
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 50 1e-33 142
WERAM-Ere-0095 ENSEEUP00000009792.1 Erinaceus europaeus 50 1e-33 142
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 50 1e-33 142
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 49 1e-33 142
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 50 1e-33 142
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 50 1e-33 142
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 50 1e-33 142
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 50 1e-33 142
WERAM-Xet-0113 ENSXETP00000038986.2 Xenopus tropicalis 50 1e-33 142
WERAM-Soa-0091 ENSSARP00000008521.1 Sorex araneus 50 2e-33 142
WERAM-Mae-0023 ENSMEUP00000001666.1 Macropus eugenii 49 2e-33 142
Created Date 25-Jun-2016