WERAM Information

Tag Content
WERAM ID WERAM-Brr-0166
Ensembl Protein ID Bra034169.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra034169 Bra034169.1 Bra034169.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.10e-10 41.6 194 244
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    t+C  Cg +++++++++ Cd C++w+H+kCvk++  ++ + k++ Cp C +
  Bra034169.1-P 194 TLCGSCGGNYTQDEFWIGCDVCERWYHGKCVKITPAKADSIKQYKCPPCCA 244
                    78****99999999********************555554489******75 PP
Protein Sequence
(Fasta)		MAAAVSSNPR TVEEIFKDYT SRRAALLRAL TKDVDGFYSQ CDPEKENLCL YGHPNESWEV 60
NLPAEEVPPE LPEPALGINF ARDGMQRKDW LSLVAVHSDC WLLSVSFYFG ARLNRNERKR 120
LFSLINDLPT LFDVVTGRKP IKDNKPSSDS GSKSRNGGTK RSIEGQPKST TPKLMEERYE 180
EEEDEEEEDE HGDTLCGSCG GNYTQDEFWI GCDVCERWYH GKCVKITPAK ADSIKQYKCP 240
PCCAKKGGRQ
Nucleotide Sequence
(Fasta)		ATGGCCGCCG CCGTCTCCTC TAACCCTCGC ACCGTCGAAG AGATCTTCAA AGACTACACC 60
TCTCGCCGCG CCGCTCTTCT TCGCGCTCTA ACCAAAGATG TTGATGGTTT TTACTCTCAA 120
TGCGATCCGG AGAAGGAGAA TTTGTGTTTG TATGGACATC CGAATGAGTC GTGGGAAGTG 180
AATCTACCGG CGGAGGAAGT TCCGCCGGAG CTACCTGAGC CTGCGCTTGG TATCAATTTC 240
GCTAGAGATG GTATGCAGAG GAAAGATTGG CTCTCGCTTG TTGCTGTTCA TAGTGATTGT 300
TGGTTGCTCT CTGTTTCTTT CTACTTTGGT GCTCGCCTTA ACCGCAACGA GAGGAAGCGG 360
CTATTCAGTC TGATCAACGA TCTCCCAACT CTCTTTGATG TAGTGACTGG TAGGAAACCA 420
ATCAAAGACA ATAAACCAAG CTCAGACTCC GGAAGCAAAT CCAGAAACGG TGGCACTAAG 480
AGATCAATAG AAGGGCAGCC AAAGAGCACA ACACCAAAAC TGATGGAAGA GAGGTACGAA 540
GAGGAGGAGG ATGAAGAGGA AGAAGACGAG CATGGAGACA CTCTCTGCGG AAGCTGCGGA 600
GGCAATTACA CACAAGATGA GTTCTGGATT GGCTGTGATG TCTGTGAACG TTGGTACCAT 660
GGAAAATGCG TGAAGATCAC TCCCGCCAAA GCAGACAGCA TCAAGCAGTA TAAATGCCCT 720
CCTTGCTGTG CAAAGAAAGG AGGAAGACAG TGA 754
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0019 Bo1g141160.1 Brassica oleracea 99 2e-123 438
WERAM-Arl-0058 fgenesh2_kg.3__ 1160__ AT3G11200.1 Arabidopsis lyrata 92 8e-106 380
WERAM-Art-0068 AT3G11200.1 Arabidopsis thaliana 91 3e-105 378
WERAM-Sot-0075 PGSC0003DMT400059399 Solanum tuberosum 78 2e-95 345
WERAM-Prp-0085 EMJ19499 Prunus persica 77 2e-93 338
WERAM-Thc-0118 EOY17763 Theobroma cacao 77 2e-92 335
WERAM-Sol-0105 Solyc09g005360.2.1 Solanum lycopersicum 78 2e-91 332
WERAM-Glm-0003 GLYMA01G29950.1 Glycine max 77 3e-91 331
WERAM-Pot-0155 POPTR_0016s12420.1 Populus trichocarpa 78 5e-91 330
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 78 1e-89 326
WERAM-Amt-0010 ERN05231 Amborella trichopoda 74 3e-89 325
WERAM-Met-0150 KEH23172 Medicago truncatula 76 4e-89 325
WERAM-Mua-0107 GSMUA_Achr7P15530_001 Musa acuminata 74 1e-86 316
WERAM-Orm-0069 OMERI07G06560.1 Oryza meridionalis 68 5e-83 304
WERAM-Orgl-0051 OGLUM05G06240.1 Oryza glumaepatula 68 5e-83 304
WERAM-Org-0074 ORGLA07G0067800.1 Oryza glaberrima 68 5e-83 304
WERAM-Ors-0066 OS07T0233300-01 Oryza sativa 67 1e-82 303
WERAM-Orr-0075 ORUFI07G08080.1 Oryza rufipogon 67 1e-82 303
WERAM-Ori-0080 BGIOSGA024567-PA Oryza indica 67 1e-82 303
WERAM-Orp-0071 OPUNC07G07630.1 Oryza punctata 68 1e-82 303
WERAM-Orni-0073 ONIVA07G06790.1 Oryza nivara 67 2e-82 302
WERAM-Lep-0074 LPERR07G06880.1 Leersia perrieri 66 1e-81 300
WERAM-Sob-0020 Sb02g006980.1 Sorghum bicolor 64 2e-80 295
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 65 6e-80 294
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 64 1e-79 293
WERAM-Zem-0003 AC225147.4_FGP003 Zea mays 65 2e-77 285
WERAM-Orb-0041 OBART03G38930.1 Oryza barthii 66 4e-77 284
WERAM-Sei-0134 Si037171m Setaria italica 62 5e-77 284
WERAM-Orbr-0060 OB05G14070.1 Oryza brachyantha 62 8e-76 280
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 66 1e-75 280
WERAM-Brd-0048 BRADI2G34640.1 Brachypodium distachyon 63 1e-75 279
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 63 1e-74 276
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 63 1e-74 276
WERAM-Aet-0099 EMT23706 Aegilops tauschii 56 2e-69 259
Created Date 25-Jun-2016