WERAM Information

Tag Content
WERAM ID WERAM-Brr-0131
Ensembl Protein ID Bra026210.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra026210 Bra026210.1 Bra026210.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 6.10e-12 46.5 192 242
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddeg.ekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                    ++C vCg++d+g e++++ Cd+C++wfH+kCvk++  +++  k++ CpsC 
  Bra026210.1-P 192 EFCGVCGESDDGeEEFWIWCDTCEKWFHGKCVKITPARAEHIKHYKCPSCC 242
                    69****7666551556*******************666664479******7 PP
Protein Sequence
(Fasta)		MEGRAAEDVF KDFRGRRAGL IKALTTDVRK FYDKCDPANE NLCLYGLPNG SWELNLPVDE 60
VPPELPEPAL GINFSRDGMP EENWVSLIAV HSDSWLIAVA FYFGARFSFD KNERMRLFKM 120
INDLPTIFEV VTGNAKQSKD QSGNSGRSKS GGVKARQSES QTKAAKRSPP PPSREESESG 180
DDDGEEGEGQ GEFCGVCGES DDGEEEFWIW CDTCEKWFHG KCVKITPARA EHIKHYKCPS 240
CCGSNKKHRA
Nucleotide Sequence
(Fasta)		ATGGAGGGAC GCGCGGCTGA AGATGTGTTT AAGGACTTTA GGGGAAGAAG AGCTGGTCTC 60
ATCAAAGCTC TCACTACTGA TGTACGCAAG TTTTACGATA AGTGTGACCC TGCCAATGAA 120
AACTTGTGTC TCTACGGACT TCCAAATGGG TCGTGGGAGC TTAATCTTCC TGTCGACGAG 180
GTCCCTCCTG AGCTTCCTGA ACCAGCTCTT GGCATCAACT TCTCAAGGGA CGGTATGCCA 240
GAGGAAAACT GGGTCTCTTT GATTGCTGTT CACTCTGACT CTTGGCTCAT CGCTGTTGCC 300
TTCTACTTTG GTGCTCGTTT CTCTTTTGAT AAAAACGAGA GGATGAGGCT GTTCAAGATG 360
ATAAATGATC TCCCAACCAT TTTCGAGGTT GTAACTGGCA ACGCAAAGCA ATCCAAGGAT 420
CAGTCTGGTA ACAGTGGCAG AAGCAAGTCT GGTGGTGTCA AGGCTCGCCA ATCTGAATCT 480
CAGACTAAGG CTGCAAAGAG ATCCCCCCCA CCACCATCAA GAGAAGAAAG TGAGAGCGGA 540
GATGATGATG GGGAGGAAGG CGAGGGGCAA GGTGAGTTTT GTGGGGTCTG TGGAGAGAGC 600
GATGATGGAG AAGAGGAGTT CTGGATATGG TGTGATACTT GTGAGAAATG GTTCCATGGA 660
AAATGCGTCA AGATCACACC TGCAAGGGCT GAGCACATCA AACATTACAA ATGCCCTTCT 720
TGCTGCGGTT CCAACAAGAA ACACAGAGCT TGA 754
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0091 Bo5g019720.1 Brassica oleracea 92 7e-106 380
WERAM-Pot-0035 POPTR_0003s04070.1 Populus trichocarpa 70 9e-81 296
WERAM-Art-0035 AT2G02470.1 Arabidopsis thaliana 71 3e-80 295
WERAM-Arl-0130 scaffold_500181.1 Arabidopsis lyrata 69 1e-79 293
WERAM-Prp-0081 EMJ24886 Prunus persica 68 1e-77 286
WERAM-Glm-0216 GLYMA17G00630.1 Glycine max 67 2e-77 285
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 66 5e-76 281
WERAM-Met-0117 KEH32736 Medicago truncatula 65 6e-76 281
WERAM-Mua-0010 GSMUA_Achr10P16300_001 Musa acuminata 64 8e-75 277
WERAM-Sei-0086 Si023009m Setaria italica 64 2e-74 275
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 65 3e-74 275
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 64 3e-74 275
WERAM-Thc-0075 EOY26404 Theobroma cacao 66 4e-74 275
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 65 4e-74 275
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 65 4e-74 275
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 65 4e-74 275
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 65 4e-74 275
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 65 4e-74 275
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 65 4e-74 275
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 65 4e-74 275
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 65 4e-74 275
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 64 6e-74 274
WERAM-Amt-0088 ERM99796 Amborella trichopoda 65 9e-74 273
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 65 9e-74 273
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 63 8e-73 270
WERAM-Aet-0106 EMT19247 Aegilops tauschii 62 3e-72 268
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 66 4e-72 268
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 60 1e-71 266
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 62 8e-71 263
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 61 1e-70 263
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 61 2e-69 259
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 64 6e-66 247
WERAM-Php-0063 PP1S262_27V6.1 Physcomitrella patens 60 1e-64 243
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 55 8e-61 230
Created Date 25-Jun-2016