WERAM Information

Tag Content
WERAM ID WERAM-Bro-0185
Ensembl Protein ID Bo9g181310.1
Gene Name ELF6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo9g181310 Bo9g181310.1 Bo9g181310.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM3_JMJD2 1.50e-69 234.8 249 920
Organism Brassica oleracea
Domain Profile
  HDM JHDM3_JMJD2
     JHDM3.txt   4 veeWnlnklktildsvekelkieieGvntpylyvgmlkttfaWhvedmdlysinylhfGapktWyavpseaakrlekllrkefsesakeceaf.... 96 
                   +++Wnl++++++ +sv++++ ++i+Gv++p++y+gml+++faWhved++l+s+nylh+G+pktWyavps++a ++e+++rk+  ++ ++++++    
  Bo9g181310.1 249 NSSWNLQMIARSPGSVTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSMNYLHTGSPKTWYAVPSDYALDFEEVIRKN--SYGRNIDQLaalt 343
                   689******************************************************************************9..999999999999* PP
     JHDM3.txt  97 .lrhkttlisPellkkagipfnrivqeagefvitfPygyhaGfnhGfnlaestnfaterwievgkeaakcs 166
                    l++kttl+sPe+++ ++ip++r+vq++gefv+tfP++yh+Gf+hGfn++e++nf t++w++v+keaa+++
  Bo9g181310.1 344 qLGEKTTLVSPEMIVSSDIPCCRLVQNPGEFVVTFPRSYHVGFSHGFNCGEAANFGTPQWLNVAKEAAVRR 414
                   *******************************************************************9987 PP
     JHDM3.txt 130 fPygyhaGfnhGfnlaestnfater 154
                     +  h+  + Gf +ae tn+a+e+
  Bo9g181310.1 897 TNREAHSSAQVGFEVAE-TNIASEK 920
                   44567888899999999.5787776 PP
Protein Sequence
(Fasta)		MGSSNVEIPN WLKAMPLAPV FRPTDTEFAD PIAYISKIEK QASAFGICKI VPPIPKPSKK 60
YVFCNLNKSL LRCPELASGV DVSKRLGQED RAVFTTRQQE LGQARKKTKE GSDVKQVWQS 120
GGVYTLEQFE SKSKAFYKSL LGTVKEVSPV VVEALFWRAA SEKPVYIEYA NDVPGSAFGE 180
PEGHFRHFRQ RKRRGRGFYQ RKNGEESLPE VAKASLASPS LSSQDPTKKK NMDVVVDEME 240
GTAGWKLSNS SWNLQMIARS PGSVTRFMPD DIPGVTSPMV YIGMLFSWFA WHVEDHELHS 300
MNYLHTGSPK TWYAVPSDYA LDFEEVIRKN SYGRNIDQLA ALTQLGEKTT LVSPEMIVSS 360
DIPCCRLVQN PGEFVVTFPR SYHVGFSHGF NCGEAANFGT PQWLNVAKEA AVRRAAMNYL 420
PMLSHQQLLY LLTMSFVSRV PRSLLPGGRS SRLRDRQREE REFLVKKAFV EDILNENKNL 480
SVLLGEPGSR LVMWDPDLLP RHSALSLSAA GVATTPAVSS PAEAKSEIEN KEENPSLLEE 540
LSLFMEKLKD VYYDDDDGQL NDFQIDSGTL PCVACGVLGF PFMSVVQPSE DALKDLSERQ 600
GEIDALENKA ESSETSDCEW NTSSRYVRPR IFCLEHTIEL QRLLQSRGGL KFLVICHKDF 660
QKFKAHAAIV AEEVKVPFRY DDVLLESASK EELSLIDLAI EGEENNEHGA DWTSKLGINL 720
RYCVKVRKNS PTNKIQHALS LGGLFSDSSH VLDMSTIKWL QRKSRSKAKP CSTSCFTPRE 780
LGEKGRKDHP VLEKEEVESQ GGRKEEKIIQ YSRKKKLNPN SNRSRHDRGV DSEVNNEVGD 840
SADLTSVTRE HQGHSVTSNN LRGVDEAAEM SDQGFKEART TNANIEEEEQ SQVVLPTNRE 900
AHSSAQVGFE VAETNIASEK IVAGMVRDDE PLASNGDQAS SSGLQAADNE NSTESEVASS 960
GDTKVVVEAK KKRKIEIDSE TNDYHPESSI GFIKSPCEGL RSRGKRKVTC EKTSFNLNEA 1020
SDEEKKHTAK RLKKTPNTGS TTTQHNLCYL EGCKMTFKSK ADLAAHKRNR CTHEGCGKKF 1080
RAHKYLVLHQ RVHNDDRPFV CPWKGCSMNF KWQWARTEHL RLHTGERPYK CKVDECGLSF 1140
RFVSDYSRHR RKTGHYVT 1158
Nucleotide Sequence
(Fasta)		ATGGGTAGTA GTAATGTCGA AATCCCCAAT TGGCTAAAGG CCATGCCTTT GGCACCCGTC 60
TTCAGACCCA CAGACACCGA GTTCGCAGAT CCCATTGCTT ACATCTCCAA GATCGAGAAA 120
CAAGCAAGCG CCTTTGGGAT CTGCAAGATC GTTCCTCCTA TCCCCAAGCC ATCTAAAAAG 180
TACGTCTTTT GCAACTTGAA CAAGTCGCTT CTGAGGTGTC CCGAGTTGGC TTCGGGTGTA 240
GACGTTTCGA AGCGTCTTGG CCAAGAGGAT AGAGCTGTGT TCACCACTAG GCAGCAAGAG 300
CTAGGCCAGG CTAGGAAAAA GACTAAAGAG GGTAGTGATG TTAAGCAGGT GTGGCAGAGT 360
GGTGGCGTGT ATACGTTGGA GCAGTTTGAG TCAAAGTCGA AGGCTTTTTA TAAAAGCCTG 420
TTGGGGACGG TTAAGGAAGT GTCGCCGGTT GTGGTTGAGG CGTTGTTCTG GAGAGCGGCT 480
TCGGAGAAGC CTGTGTATAT AGAGTATGCG AACGATGTCC CTGGCTCGGC TTTTGGCGAG 540
CCGGAGGGGC ATTTCAGGCA TTTCCGGCAG AGGAAGAGGA GAGGGAGAGG GTTTTATCAG 600
AGGAAGAATG GTGAGGAATC GTTGCCTGAG GTGGCGAAGG CATCTCTTGC TTCTCCGAGT 660
TTATCATCTC AAGATCCAAC CAAGAAGAAG AATATGGATG TTGTTGTTGA TGAAATGGAA 720
GGTACTGCAG GGTGGAAGCT TTCCAATAGT TCGTGGAACC TTCAGATGAT CGCGCGTTCG 780
CCTGGCTCTG TGACACGCTT CATGCCGGAT GACATACCTG GTGTAACGTC TCCCATGGTT 840
TATATCGGTA TGTTGTTCAG CTGGTTTGCT TGGCACGTTG AGGACCATGA GCTACACAGT 900
ATGAACTATC TTCACACTGG CTCGCCAAAG ACTTGGTACG CTGTCCCTAG TGATTATGCG 960
CTCGATTTCG AAGAGGTTAT CCGCAAGAAT TCTTATGGCA GAAACATTGA TCAACTCGCT 1020
GCTCTCACCC AACTAGGCGA AAAGACAACT CTTGTATCAC CTGAGATGAT AGTTTCATCT 1080
GACATTCCTT GCTGTAGGTT GGTACAAAAT CCTGGTGAAT TTGTTGTGAC TTTCCCGAGG 1140
TCTTATCATG TAGGATTCAG CCACGGTTTT AACTGTGGGG AAGCCGCTAA TTTTGGAACT 1200
CCACAGTGGC TCAACGTAGC TAAGGAAGCT GCTGTGCGTA GGGCAGCCAT GAATTATCTC 1260
CCCATGTTGT CCCATCAGCA GCTTCTATAT CTCTTGACCA TGTCCTTTGT TTCAAGAGTG 1320
CCACGATCGT TGCTACCAGG TGGTCGTAGC TCCCGGCTGA GAGATCGCCA GAGAGAAGAA 1380
AGGGAGTTCC TTGTGAAGAA AGCTTTTGTA GAAGATATAT TGAACGAAAA CAAGAATCTA 1440
TCTGTTCTAC TTGGAGAACC GGGCTCTCGT TTGGTGATGT GGGACCCTGA TTTACTTCCC 1500
CGTCATAGTG CACTGTCTCT TTCAGCTGCT GGAGTTGCTA CCACTCCTGC GGTTTCATCA 1560
CCAGCAGAGG CAAAAAGTGA AATTGAGAAT AAGGAGGAGA ACCCTAGTCT TTTAGAGGAA 1620
TTGAGTTTGT TCATGGAGAA GCTGAAAGAT GTGTACTACG ACGACGATGA TGGTCAGCTT 1680
AATGATTTCC AAATCGATTC TGGAACGTTG CCATGTGTGG CGTGCGGCGT TCTTGGCTTC 1740
CCCTTTATGT CTGTGGTACA GCCTTCTGAA GACGCATTAA AAGATCTCTC AGAGAGACAA 1800
GGAGAGATAG ATGCTCTGGA AAATAAGGCA GAGTCATCAG AAACATCTGA CTGTGAATGG 1860
AACACGTCAT CCAGATATGT AAGACCTCGC ATATTCTGCC TCGAACACAC TATTGAACTT 1920
CAGAGACTGT TGCAGTCAAG AGGTGGACTG AAGTTCCTTG TAATTTGCCA TAAAGACTTT 1980
CAGAAATTTA AGGCGCATGC GGCTATAGTG GCAGAGGAAG TGAAAGTCCC TTTCAGATAT 2040
GACGATGTCT TGTTAGAGAG TGCGTCTAAA GAAGAGTTGA GTCTAATTGA TCTAGCAATC 2100
GAAGGTGAAG AAAACAACGA ACACGGCGCA GACTGGACCT CCAAACTCGG CATAAACTTA 2160
CGGTACTGTG TCAAAGTGAG GAAAAATTCG CCTACTAATA AGATTCAGCA TGCGCTGTCG 2220
CTAGGTGGCT TGTTCTCGGA CTCGAGCCAT GTGCTGGATA TGTCAACTAT CAAATGGCTG 2280
CAGCGAAAAT CACGCTCAAA AGCTAAGCCC TGCTCCACGT CATGTTTCAC ACCTCGTGAA 2340
TTAGGGGAGA AAGGAAGAAA AGATCACCCA GTACTCGAGA AAGAAGAAGT TGAATCACAA 2400
GGGGGAAGAA AGGAGGAAAA GATCATCCAG TACTCGAGAA AGAAGAAGTT GAATCCCAAT 2460
TCCAATAGGT CACGTCATGA TAGGGGAGTT GATTCTGAGG TGAACAATGA GGTTGGAGAC 2520
TCTGCTGATT TAACTTCCGT AACCAGAGAG CACCAGGGAC ATTCTGTGAC CAGTAATAAC 2580
CTCCGTGGTG TTGATGAAGC GGCTGAAATG AGCGATCAAG GGTTCAAAGA AGCTAGAACT 2640
ACTAACGCTA ACATTGAGGA GGAAGAGCAA TCACAGGTGG TGCTACCTAC CAATAGAGAA 2700
GCACATTCTT CAGCTCAAGT TGGTTTTGAA GTTGCTGAAA CCAACATTGC CAGTGAGAAG 2760
ATAGTTGCGG GCATGGTCCG TGACGATGAA CCTCTGGCAA GCAACGGTGA TCAAGCTTCT 2820
TCAAGTGGCT TGCAAGCTGC AGATAATGAA AATAGCACGG AGAGCGAAGT CGCAAGCTCA 2880
GGTGACACCA AGGTTGTCGT GGAAGCAAAG AAGAAGCGGA AAATAGAAAT AGACTCTGAG 2940
ACGAATGATT ATCATCCAGA GAGTAGCATT GGTTTCATAA AGAGTCCTTG TGAAGGGTTG 3000
AGGTCAAGGG GCAAGAGGAA AGTGACATGT GAAAAAACTT CATTCAATCT CAATGAAGCT 3060
AGCGATGAAG AGAAGAAACA CACTGCGAAA AGGCTCAAGA AAACTCCAAA TACTGGCTCA 3120
ACGACAACTC AGCACAACCT TTGTTACCTA GAGGGATGCA AGATGACGTT CAAGAGCAAA 3180
GCGGACTTAG CAGCTCACAA GAGAAACCGC TGCACGCACG AAGGGTGCGG GAAGAAGTTC 3240
AGGGCTCACA AGTATCTGGT GCTTCATCAG CGCGTTCATA ACGATGATAG ACCGTTCGTG 3300
TGTCCTTGGA AAGGATGTTC AATGAATTTC AAATGGCAAT GGGCGAGGAC TGAGCATTTG 3360
CGTCTGCACA CGGGAGAGCG ACCGTACAAA TGCAAAGTCG ACGAGTGTGG GCTGTCGTTT 3420
AGGTTTGTGT CGGATTATAG CCGTCACAGA CGGAAGACGG GCCATTATGT GACATAG 3478
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0049 Bra009474.1-P Brassica rapa 90 0.0 2019
WERAM-Arl-0097 fgenesh2_kg.6__ 338__ AT5G04240.1 Arabidopsis lyrata 69 0.0 1645
WERAM-Art-0115 AT5G04240.1 Arabidopsis thaliana 70 0.0 1631
WERAM-Prp-0012 EMJ21782 Prunus persica 56 0.0 850
WERAM-Met-0029 AES62124 Medicago truncatula 53 0.0 828
WERAM-Pot-0120 POPTR_0010s23160.1 Populus trichocarpa 59 0.0 721
WERAM-Thc-0120 EOY18687 Theobroma cacao 61 0.0 721
WERAM-Glm-0116 GLYMA10G35350.1 Glycine max 57 0.0 646
WERAM-Lep-0036 LPERR03G03610.1 Leersia perrieri 51 3e-174 610
WERAM-Orr-0031 ORUFI03G03680.1 Oryza rufipogon 51 9e-173 605
WERAM-Mua-0019 GSMUA_Achr11P02040_001 Musa acuminata 52 1e-172 605
WERAM-Orm-0034 OMERI03G03770.1 Oryza meridionalis 51 1e-172 605
WERAM-Ori-0038 BGIOSGA011871-PA Oryza indica 51 2e-172 603
WERAM-Orl-0032 KN538795.1_FGP006 Oryza longistaminata 50 4e-172 603
WERAM-Orp-0030 OPUNC03G03660.1 Oryza punctata 50 4e-171 599
WERAM-Brd-0036 BRADI1G74997.1 Brachypodium distachyon 51 3e-169 593
WERAM-Orgl-0034 OGLUM03G03870.1 Oryza glumaepatula 49 5e-167 586
WERAM-Orni-0031 ONIVA03G03740.1 Oryza nivara 50 2e-165 580
WERAM-Orb-0032 OBART03G03980.1 Oryza barthii 49 4e-165 580
WERAM-Orbr-0039 OB03G14030.1 Oryza brachyantha 50 1e-164 578
WERAM-Sei-0124 Si033886m Setaria italica 55 4e-162 570
WERAM-Org-0032 ORGLA03G0037300.1 Oryza glaberrima 56 2e-157 554
WERAM-Php-0019 PP1S138_176V6.1 Physcomitrella patens 44 5e-135 479
WERAM-Amt-0014 ERM94869 Amborella trichopoda 60 4e-131 467
WERAM-Hov-0111 MLOC_80561.1 Hordeum vulgare 61 1e-121 435
WERAM-Ors-0009 OS01T0907400-01 Oryza sativa 40 3e-119 427
WERAM-Sem-0103 EFJ29606 Selaginella moellendorffii 42 1e-117 422
WERAM-Sob-0058 Sb03g043210.1 Sorghum bicolor 46 3e-116 417
WERAM-Tru-0073 TRIUR3_27468-P1 Triticum urartu 77 3e-100 364
WERAM-Tra-0350 TRAES3BF094600010CFD_t1 Triticum aestivum 46 2e-91 335
WERAM-Viv-0109 VIT_17s0000g09980.t01 Vitis vinifera 59 2e-90 332
WERAM-Sol-0052 Solyc03g111590.2.1 Solanum lycopersicum 60 2e-89 328
WERAM-Sot-0040 PGSC0003DMT400039224 Solanum tuberosum 59 1e-88 325
WERAM-Zem-0117 GRMZM2G339379_P01 Zea mays 55 9e-84 309
WERAM-Aet-0037 EMT30548 Aegilops tauschii 40 1e-41 169
WERAM-Phn-0021 SNOT_11200 Phaeosphaeria nodorum 29 4e-38 158
WERAM-Pytr-0035 EDU44093 Pyrenophora triticirepentis 28 6e-38 157
WERAM-Pem-0068 ENSPMAP00000007536.1 Petromyzon marinus 42 9e-38 156
WERAM-Crn-0020 AAW43237 Cryptococcus neoformans 40 2e-37 155
WERAM-Pyt-0008 EFQ94561 Pyrenophora teres 28 2e-37 155
WERAM-Lem-0001 CBY01560 Leptosphaeria maculans 28 2e-37 155
WERAM-Lab-0033 EDR12730 Laccaria bicolor 42 4e-37 154
WERAM-Mao-0014 MGG_04878T0 Magnaporthe oryzae 29 6e-37 154
WERAM-Mel-0019 EGF99064 Melampsora laricipopulina 41 7e-37 154
WERAM-Map-0012 MAPG_04048T0 Magnaporthe poae 29 7e-37 154
WERAM-Mum-0200 ENSMUSP00000061095.7 Mus musculus 32 1e-36 153
WERAM-Gaa-0127 ENSGACP00000016095.1 Gasterosteus aculeatus 33 2e-36 152
WERAM-Ora-0095 ENSOANP00000017333.1 Ornithorhynchus anatinus 33 2e-36 152
WERAM-Miv-0011 MVLG_01737T0 Microbotryum violaceum 41 3e-36 151
WERAM-Tar-0156 ENSTRUP00000033883.1 Takifugu rubripes 31 4e-36 151
WERAM-Dan-0105 ENSDNOP00000012063.3 Dasypus novemcinctus 32 4e-36 151
WERAM-Nec-0020 EFNCRP00000004299 Neurospora crassa 35 4e-36 151
WERAM-Anc-0002 ENSACAP00000000033.2 Anolis carolinensis 32 6e-36 150
WERAM-Pat-0036 ENSPTRP00000056131.1 Pan troglodytes 32 7e-36 150
WERAM-Ten-0151 ENSTNIP00000000510.1 Tetraodon nigroviridis 31 7e-36 150
WERAM-Drm-0042 FBpp0311492 Drosophila melanogaster 37 7e-36 150
WERAM-Gog-0048 ENSGGOP00000004481.2 Gorilla gorilla 32 8e-36 150
WERAM-Asm-0193 ENSAMXP00000018348.1 Astyanax mexicanus 32 8e-36 150
WERAM-Hos-0030 ENSP00000382688.2 Homo sapiens 32 8e-36 150
WERAM-Vip-0044 ENSVPAP00000003974.1 Vicugna pacos 41 1e-35 150
WERAM-Orla-0155 ENSORLP00000018006.1 Oryzias latipes 31 1e-35 150
WERAM-Poa-0197 ENSPPYP00000022803.2 Pongo abelii 41 1e-35 149
WERAM-Pes-0046 ENSPSIP00000007266.1 Pelodiscus sinensis 41 1e-35 149
WERAM-Bot-0140 ENSBTAP00000019893.5 Bos taurus 41 1e-35 149
WERAM-Caf-0167 ENSCAFP00000023835.3 Canis familiaris 41 1e-35 149
WERAM-Loa-0002 ENSLAFP00000000253.2 Loxodonta africana 41 1e-35 149
WERAM-Caj-0062 ENSCJAP00000010885.1 Callithrix jacchus 41 1e-35 149
WERAM-Ova-0093 ENSOARP00000009606.1 Ovis aries 41 1e-35 149
WERAM-Otg-0056 ENSOGAP00000003880.2 Otolemur garnettii 41 1e-35 149
WERAM-Sus-0088 ENSSSCP00000013112.2 Sus scrofa 41 1e-35 149
WERAM-Tut-0063 ENSTTRP00000004859.1 Tursiops truncatus 41 1e-35 149
WERAM-Aim-0061 ENSAMEP00000005475.1 Ailuropoda melanoleuca 41 1e-35 149
WERAM-Ict-0017 ENSSTOP00000001099.2 Ictidomys tridecemlineatus 41 2e-35 149
WERAM-Nol-0172 ENSNLEP00000019325.2 Nomascus leucogenys 41 2e-35 149
WERAM-Tub-0140 ENSTBEP00000015071.1 Tupaia belangeri 41 2e-35 149
WERAM-Prc-0127 ENSPCAP00000011494.1 Procavia capensis 41 2e-35 149
WERAM-Eqc-0209 ENSECAP00000022585.1 Equus caballus 41 2e-35 149
WERAM-Paa-0060 ENSPANP00000008466.1 Papio anubis 41 2e-35 149
WERAM-Chs-0153 ENSCSAP00000008766.1 Chlorocebus sabaeus 41 2e-35 149
WERAM-Xim-0048 ENSXMAP00000004574.1 Xiphophorus maculatus 31 2e-35 149
WERAM-Mup-0108 ENSMPUP00000009622.1 Mustela putorius furo 41 2e-35 149
WERAM-Mam-0191 ENSMMUP00000027068.2 Macaca mulatta 41 2e-35 149
WERAM-Pof-0121 ENSPFOP00000010723.2 Poecilia formosa 31 2e-35 149
WERAM-Orc-0101 ENSOCUP00000008740.2 Oryctolagus cuniculus 41 2e-35 149
WERAM-Cap-0110 ENSCPOP00000008106.2 Cavia porcellus 41 2e-35 149
WERAM-Xet-0049 ENSXETP00000015599.3 Xenopus tropicalis 40 2e-35 149
WERAM-Myl-0054 ENSMLUP00000004559.2 Myotis lucifugus 41 2e-35 149
WERAM-Ere-0114 ENSEEUP00000012051.1 Erinaceus europaeus 41 2e-35 149
WERAM-Tum-0032 CAZ86330 Tuber melanosporum 35 2e-35 149
WERAM-Sah-0178 ENSSHAP00000018525.1 Sarcophilus harrisii 41 2e-35 149
WERAM-Lac-0120 ENSLACP00000014409.1 Latimeria chalumnae 41 2e-35 149
WERAM-Ptv-0041 ENSPVAP00000004453.1 Pteropus vampyrus 41 2e-35 149
WERAM-Mod-0172 ENSMODP00000022937.3 Monodelphis domestica 41 2e-35 149
WERAM-Orn-0119 ENSONIP00000012262.1 Oreochromis niloticus 40 2e-35 149
WERAM-Gag-0021 GGTG_06066T0 Gaeumannomyces graminis 31 3e-35 148
WERAM-Trr-0012 EGR49606 Trichoderma reesei 37 3e-35 148
WERAM-Fec-0141 ENSFCAP00000013303.3 Felis catus 41 3e-35 148
WERAM-Leo-0177 ENSLOCP00000021020.1 Lepisosteus oculatus 40 3e-35 148
WERAM-Ran-0254 ENSRNOP00000073953.1 Rattus norvegicus 31 4e-35 148
WERAM-Chh-0061 ENSCHOP00000006896.1 Choloepus hoffmanni 41 4e-35 148
WERAM-Soa-0132 ENSSARP00000013044.1 Sorex araneus 41 4e-35 148
WERAM-Spr-0023 CBQ72974 Sporisorium reilianum 40 5e-35 147
WERAM-Mae-0078 ENSMEUP00000007759.1 Macropus eugenii 41 6e-35 147
WERAM-Mim-0054 ENSMICP00000005521.1 Microcebus murinus 39 7e-35 147
WERAM-Anp-0001 ENSAPLP00000000531.1 Anas platyrhynchos 40 7e-35 147
WERAM-Tas-0106 ENSTSYP00000011121.1 Tarsius syrichta 39 7e-35 147
Created Date 25-Jun-2016