WERAM Information

Tag Content
WERAM ID WERAM-Brr-0049
Ensembl Protein ID Bra009474.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra009474 Bra009474.1 Bra009474.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM3_JMJD2 1.50e-68 231 245 410
Organism Brassica rapa
Domain Profile
  HDM JHDM3_JMJD2
      JHDM3.txt   4 veeWnlnklktildsvekelkieieGvntpylyvgmlkttfaWhvedmdlysinylhfGapktWyavpseaakrlekllrkefsesakeceaf... 96 
                    +++Wnl++++++ +sv++++ ++i+Gv++p++y+gml+++faWhved++l+s+nylh+G+pktWyavp ++a ++e+++rk+  ++  +++++   
  Bra009474.1-P 245 NSSWNLQMIARSPGSVTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSMNYLHTGSPKTWYAVPGDYALDFEEVIRKN--SYGSNLDQLaal 338
                    689*****************************************************************************99..666777766666 PP
      JHDM3.txt  97 ..lrhkttlisPellkkagipfnrivqeagefvitfPygyhaGfnhGfnlaestnfaterwievgkeaakcs 166
                      l++kttl+sPe+++ ++ip++r+vq++gefv+tfP++yh+Gf+hGfn++e++nf t++w++v+keaa+++
  Bra009474.1-P 339 tqLGEKTTLVSPEIIVSSDIPCCRLVQNPGEFVVTFPRSYHVGFSHGFNCGEAANFGTPQWLNVAKEAAVRR 410
                    99******************************************************************9987 PP
Protein Sequence
(Fasta)		MGSSNVEIPN WLKAMPLAPV FRPTDTEFAD PIAYISKIEK QASAFGICKI IPPIPKPSKK 60
YVFCNLNKSL LRCPELASGV DVSKLGQEDR AVFTTRQQEL GQARKKSRGG EGGDVKQVWQ 120
SGGVYTLEQF ESKSKAFYKS QLGTVKEVSP VVVEALFWRA ASEKPMYIEY ANDVPGSAFG 180
EPEGHFRHFR QRKRRGRGFY QRKNGESSLP VVSPSLSAQD PSKKKNMDVV VVDEMEGTAG 240
WKLSNSSWNL QMIARSPGSV TRFMPDDIPG VTSPMVYIGM LFSWFAWHVE DHELHSMNYL 300
HTGSPKTWYA VPGDYALDFE EVIRKNSYGS NLDQLAALTQ LGEKTTLVSP EIIVSSDIPC 360
CRLVQNPGEF VVTFPRSYHV GFSHGFNCGE AANFGTPQWL NVAKEAAVRR AAMNYLPMLS 420
HQQLLYLLTM SFVSRQGNIS IFPLVPRSLL PGGRSSRLRD RQREEREFLV KKAFVEDILN 480
ENKNLSVLLG EPGSRLVMWD PDLLPRHSVL ALAATGVATT PAVSSPAEAK SEIENKEENP 540
SLLEELSLFM EKLKDVYYDD DDGQLNDFQI DSGTLPCVAC GVLGFPFMSV VQPSENALKD 600
LSERQGEIDA LEDKAESSEK SNCEWNTSSR YIRPRIFCLE HTIELQRLLQ SRGGLKFLVI 660
CHKDFQKFKA HAAIVAEEVK VPFRYDDVLL ESASKEELSL IDLAIEGEEN NEYGADWTSK 720
LGINLRYCVK VRKNSPTNKI QHALSLGGLF SDSSHVLDMS TIKWLQRKSR SKAKPCSTTS 780
GFTSRERLEV KAERRLGEKE EVESQGGRKE EKIIQYSRKK KLNPNANRSR HASAVDSEMN 840
NEIGDSADLT SVTREHQGHS VALEPRTTNA NSEEEEQSQV VLPTNREAVS EDIRHTEQQE 900
EQTHSSAQVG LEVSETNIAS EKIVVDMVRD DDPLASNGDE ASSSGLQAAD DENSMESEVA 960
SSGNTKVIVE AKKKRKIELE SETNDYHPES SIGFIKSPCE GLRSRGKRKV TCEETSSNLN 1020
EASDEEKKHT AKRLKKTPNT GSTTTQHNLC YQEGCKMTFK SKADLAAHKR NRCTHEGCGK 1080
KFRAHKYLVL HQRVHNDERP LACPWKGCSM NFKWQWARTE HLRLHTGERP YKCKVEECGL 1140
SFRFVSDYSR HRRKTGHYVT
Nucleotide Sequence
(Fasta)		ATGGGTAGTA GTAATGTCGA AATCCCCAAT TGGCTAAAGG CCATGCCTTT GGCACCCGTC 60
TTCAGACCCA CAGACACCGA GTTCGCAGAT CCCATTGCTT ACATCTCCAA GATCGAGAAA 120
CAAGCAAGCG CCTTTGGGAT CTGCAAGATC ATTCCTCCTA TCCCCAAGCC ATCGAAAAAG 180
TATGTCTTTT GCAACTTGAA CAAGTCTCTT TTGAGGTGTC CTGAGTTAGC TTCTGGTGTA 240
GACGTCTCTA AGCTTGGGCA AGAGGATAGA GCTGTGTTCA CCACTAGACA GCAAGAGCTA 300
GGCCAGGCTA GGAAAAAGAG CAGAGGAGGA GAGGGTGGTG ATGTTAAGCA GGTGTGGCAA 360
AGTGGTGGCG TGTACACGTT GGAGCAGTTT GAGTCAAAGT CGAAGGCTTT TTATAAGAGT 420
CAGTTAGGGA CGGTTAAGGA AGTGTCGCCG GTTGTGGTTG AGGCGTTGTT CTGGAGAGCG 480
GCTTCGGAGA AGCCTATGTA TATAGAGTAT GCGAACGATG TCCCTGGCTC GGCCTTTGGC 540
GAGCCGGAGG GGCATTTCAG GCATTTCCGG CAGAGGAAGA GGAGAGGGAG AGGGTTTTAC 600
CAGAGGAAGA ATGGTGAGAG TTCGTTGCCT GTTGTGTCTC CGAGTTTATC AGCTCAAGAT 660
CCATCCAAGA AGAAGAATAT GGATGTTGTT GTTGTTGATG AAATGGAAGG TACTGCAGGG 720
TGGAAGCTTT CAAACAGTTC GTGGAACCTT CAGATGATCG CACGTTCGCC TGGCTCTGTG 780
ACACGCTTCA TGCCGGATGA CATACCTGGT GTGACGTCTC CCATGGTTTA TATCGGTATG 840
TTGTTCAGCT GGTTTGCCTG GCACGTTGAG GACCATGAGC TTCACAGTAT GAATTATCTT 900
CACACTGGCT CGCCAAAGAC TTGGTACGCT GTCCCTGGTG ATTATGCGCT CGATTTCGAA 960
GAGGTTATCC GCAAGAATTC TTATGGCAGT AACCTTGATC AACTGGCTGC TCTCACCCAA 1020
CTAGGAGAAA AGACAACTCT TGTATCACCT GAGATTATAG TTTCATCTGA CATTCCTTGC 1080
TGTAGGTTGG TACAAAATCC TGGTGAATTT GTTGTGACTT TCCCAAGGTC TTATCATGTA 1140
GGATTCAGCC ACGGTTTTAA CTGTGGGGAA GCCGCCAATT TTGGAACTCC ACAGTGGCTC 1200
AACGTAGCTA AGGAAGCTGC TGTGCGTAGG GCGGCCATGA ATTATCTCCC CATGTTGTCC 1260
CATCAGCAGC TTCTATATCT CTTGACCATG TCCTTTGTTT CAAGGCAAGG CAACATTTCA 1320
ATTTTCCCTT TAGTGCCACG CTCGTTGCTG CCAGGTGGTC GTAGCTCCCG GCTGAGAGAT 1380
CGACAGAGAG AAGAAAGGGA GTTCCTTGTG AAGAAAGCTT TTGTAGAAGA TATATTGAAC 1440
GAAAACAAGA ATCTATCTGT TCTACTTGGA GAACCGGGCT CTCGTTTGGT GATGTGGGAC 1500
CCTGATCTAC TTCCGCGTCA TAGTGTCCTG GCTCTTGCAG CTACTGGAGT TGCTACCACT 1560
CCTGCGGTTT CATCACCAGC AGAGGCAAAA AGTGAAATTG AGAATAAGGA GGAGAACCCT 1620
AGTCTTTTAG AGGAATTGAG TTTGTTCATG GAGAAGCTGA AAGATGTGTA CTACGACGAT 1680
GATGACGGTC AGCTTAATGA TTTCCAAATT GATTCTGGAA CCTTGCCATG TGTGGCGTGT 1740
GGCGTTCTTG GCTTCCCTTT TATGTCTGTG GTACAGCCTT CTGAAAATGC ATTAAAAGAT 1800
CTCTCAGAGA GACAAGGAGA GATAGATGCT CTGGAAGATA AGGCAGAGTC ATCAGAAAAG 1860
TCTAACTGTG AGTGGAACAC GTCATCCAGA TATATAAGAC CTCGCATTTT CTGCCTTGAA 1920
CACACTATCG AACTTCAGAG ACTGCTGCAG TCAAGAGGTG GACTGAAGTT CCTTGTAATT 1980
TGCCATAAAG ACTTTCAGAA ATTTAAGGCG CATGCGGCTA TAGTGGCAGA GGAAGTGAAA 2040
GTCCCTTTCA GATATGATGA TGTCTTGTTA GAGAGTGCGT CTAAAGAAGA GCTGAGTCTA 2100
ATTGATCTTG CAATCGAAGG TGAAGAAAAT AACGAGTACG GCGCAGACTG GACCTCGAAA 2160
CTCGGCATCA ACTTACGGTA CTGTGTCAAA GTGAGGAAAA ATTCTCCTAC TAATAAGATT 2220
CAGCATGCGC TGTCTCTAGG TGGCTTGTTC TCGGACTCGA GCCACGTGCT GGATATGTCA 2280
ACTATCAAAT GGCTGCAGAG GAAATCACGC TCAAAAGCTA AACCCTGCTC TACTACCTCG 2340
GGTTTCACAT CTCGTGAACG TCTTGAGGTA AAAGCAGAGA GAAGATTAGG GGAGAAAGAA 2400
GAAGTTGAAT CACAAGGGGG AAGAAAGGAA GAAAAGATCA TCCAGTACTC GAGAAAGAAA 2460
AAGTTGAATC CCAATGCCAA TAGGTCACGT CATGCTAGTG CAGTTGATTC TGAGATGAAT 2520
AATGAGATTG GAGACTCTGC TGATCTTACT TCCGTAACCA GAGAGCACCA GGGACACTCT 2580
GTGGCCCTAG AACCTAGAAC TACTAACGCT AACAGTGAGG AGGAAGAGCA ATCACAGGTG 2640
GTGCTACCTA CCAATAGAGA AGCTGTATCT GAAGATATAA GGCACACTGA GCAACAAGAA 2700
GAGCAAACAC ATTCTTCAGC TCAAGTGGGT TTAGAAGTTT CTGAAACCAA CATTGCTAGT 2760
GAGAAGATAG TTGTGGACAT GGTCCGTGAC GATGACCCTC TGGCAAGCAA CGGTGATGAA 2820
GCTTCTTCAA GTGGCTTGCA AGCTGCAGAT GATGAAAATA GCATGGAGAG CGAAGTTGCA 2880
AGCTCAGGAA ACACCAAGGT TATCGTGGAA GCAAAGAAGA AGCGGAAAAT AGAATTAGAG 2940
TCTGAGACGA ATGATTATCA TCCAGAGAGT AGCATTGGTT TCATAAAGAG TCCTTGTGAA 3000
GGGTTGAGGT CAAGGGGAAA GAGGAAAGTG ACATGCGAAG AAACTTCATC CAATCTCAAT 3060
GAAGCGAGCG ATGAAGAGAA GAAACACACT GCGAAAAGGC TCAAGAAAAC TCCAAATACT 3120
GGCTCAACGA CAACTCAGCA CAACCTTTGT TACCAAGAGG GATGCAAGAT GACGTTCAAG 3180
AGCAAAGCGG ACTTAGCAGC TCACAAGAGG AACCGATGCA CGCACGAAGG GTGTGGGAAG 3240
AAGTTCAGGG CTCACAAGTA TCTGGTGCTT CATCAGCGCG TTCATAACGA TGAAAGACCA 3300
TTGGCGTGCC CTTGGAAAGG ATGTTCAATG AATTTCAAAT GGCAATGGGC GAGGACTGAG 3360
CATCTGCGTC TGCACACTGG GGAACGACCG TACAAATGCA AGGTCGAGGA GTGTGGGCTT 3420
TCGTTTAGGT TTGTGTCGGA TTATAGCCGT CACAGACGGA AGACTGGACA TTATGTGACA 3480
TAG 3484
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0185 Bo9g181310.1 Brassica oleracea 90 0.0 1978
WERAM-Art-0115 AT5G04240.1 Arabidopsis thaliana 78 0.0 1265
WERAM-Arl-0097 fgenesh2_kg.6__ 338__ AT5G04240.1 Arabidopsis lyrata 76 0.0 1256
WERAM-Met-0029 AES62124 Medicago truncatula 50 0.0 774
WERAM-Pot-0120 POPTR_0010s23160.1 Populus trichocarpa 59 0.0 715
WERAM-Thc-0120 EOY18687 Theobroma cacao 60 0.0 714
WERAM-Glm-0116 GLYMA10G35350.1 Glycine max 57 0.0 642
WERAM-Prp-0012 EMJ21782 Prunus persica 57 7e-180 629
WERAM-Mua-0019 GSMUA_Achr11P02040_001 Musa acuminata 52 2e-171 600
WERAM-Orr-0031 ORUFI03G03680.1 Oryza rufipogon 50 6e-167 586
WERAM-Orm-0034 OMERI03G03770.1 Oryza meridionalis 50 2e-166 584
WERAM-Ori-0038 BGIOSGA011871-PA Oryza indica 50 2e-166 584
WERAM-Orl-0032 KN538795.1_FGP006 Oryza longistaminata 50 3e-166 583
WERAM-Brd-0036 BRADI1G74997.1 Brachypodium distachyon 51 8e-166 582
WERAM-Orp-0030 OPUNC03G03660.1 Oryza punctata 50 1e-164 578
WERAM-Orgl-0034 OGLUM03G03870.1 Oryza glumaepatula 48 3e-161 567
WERAM-Lep-0036 LPERR03G03610.1 Leersia perrieri 57 5e-161 566
WERAM-Orni-0031 ONIVA03G03740.1 Oryza nivara 49 1e-160 565
WERAM-Orb-0032 OBART03G03980.1 Oryza barthii 48 2e-160 564
WERAM-Sei-0124 Si033886m Setaria italica 55 1e-159 561
WERAM-Orbr-0039 OB03G14030.1 Oryza brachyantha 49 3e-159 560
WERAM-Org-0032 ORGLA03G0037300.1 Oryza glaberrima 56 2e-156 550
WERAM-Php-0019 PP1S138_176V6.1 Physcomitrella patens 51 8e-134 476
WERAM-Amt-0014 ERM94869 Amborella trichopoda 60 2e-130 464
WERAM-Hov-0111 MLOC_80561.1 Hordeum vulgare 63 2e-122 437
WERAM-Sol-0052 Solyc03g111590.2.1 Solanum lycopersicum 47 3e-120 431
WERAM-Sot-0040 PGSC0003DMT400039224 Solanum tuberosum 47 5e-120 430
WERAM-Viv-0109 VIT_17s0000g09980.t01 Vitis vinifera 46 2e-115 415
WERAM-Sob-0058 Sb03g043210.1 Sorghum bicolor 45 3e-114 411
WERAM-Ors-0009 OS01T0907400-01 Oryza sativa 44 1e-112 405
WERAM-Sem-0103 EFJ29606 Selaginella moellendorffii 46 3e-111 401
WERAM-Tra-0350 TRAES3BF094600010CFD_t1 Triticum aestivum 39 6e-111 399
WERAM-Zem-0117 GRMZM2G339379_P01 Zea mays 44 2e-108 391
WERAM-Tru-0073 TRIUR3_27468-P1 Triticum urartu 75 3e-101 367
WERAM-Aet-0037 EMT30548 Aegilops tauschii 45 8e-43 173
WERAM-Pem-0068 ENSPMAP00000007536.1 Petromyzon marinus 43 2e-38 158
WERAM-Mao-0014 MGG_04878T0 Magnaporthe oryzae 30 3e-38 158
WERAM-Crn-0020 AAW43237 Cryptococcus neoformans 41 5e-38 157
WERAM-Nec-0020 EFNCRP00000004299 Neurospora crassa 29 6e-38 157
WERAM-Lab-0033 EDR12730 Laccaria bicolor 42 8e-38 157
WERAM-Map-0012 MAPG_04048T0 Magnaporthe poae 30 1e-37 156
WERAM-Tar-0156 ENSTRUP00000033883.1 Takifugu rubripes 31 2e-37 155
WERAM-Trr-0012 EGR49606 Trichoderma reesei 30 2e-37 155
WERAM-Drm-0042 FBpp0311492 Drosophila melanogaster 39 6e-37 154
WERAM-Gag-0021 GGTG_06066T0 Gaeumannomyces graminis 30 6e-37 154
WERAM-Xet-0055 ENSXETP00000017471.2 Xenopus tropicalis 32 9e-37 153
WERAM-Trv-0029 EHK20007 Trichoderma virens 30 1e-36 153
WERAM-Ora-0095 ENSOANP00000017333.1 Ornithorhynchus anatinus 32 1e-36 152
WERAM-Pes-0122 ENSPSIP00000014677.1 Pelodiscus sinensis 31 2e-36 152
WERAM-Lac-0117 ENSLACP00000014279.1 Latimeria chalumnae 31 2e-36 152
WERAM-Coi-0029 EAS31076 Coccidioides immitis 29 2e-36 152
WERAM-Xim-0032 ENSXMAP00000003405.1 Xiphophorus maculatus 30 2e-36 152
WERAM-Asm-0235 ENSAMXP00000025438.1 Astyanax mexicanus 31 2e-36 152
WERAM-Pof-0180 ENSPFOP00000015417.2 Poecilia formosa 30 2e-36 152
WERAM-Gam-0220 ENSGMOP00000021028.1 Gadus morhua 31 3e-36 152
WERAM-Mel-0019 EGF99064 Melampsora laricipopulina 42 4e-36 151
WERAM-Gaa-0127 ENSGACP00000016095.1 Gasterosteus aculeatus 32 4e-36 151
WERAM-Miv-0011 MVLG_01737T0 Microbotryum violaceum 41 4e-36 151
WERAM-Dan-0105 ENSDNOP00000012063.3 Dasypus novemcinctus 31 5e-36 150
WERAM-Tum-0032 CAZ86330 Tuber melanosporum 34 6e-36 150
WERAM-Orn-0224 ENSONIP00000024196.1 Oreochromis niloticus 31 6e-36 150
WERAM-Orla-0158 ENSORLP00000018507.1 Oryzias latipes 30 7e-36 150
WERAM-Anc-0002 ENSACAP00000000033.2 Anolis carolinensis 31 7e-36 150
WERAM-Gog-0048 ENSGGOP00000004481.2 Gorilla gorilla 31 7e-36 150
WERAM-Pat-0036 ENSPTRP00000056131.1 Pan troglodytes 31 8e-36 150
WERAM-Hos-0030 ENSP00000382688.2 Homo sapiens 31 8e-36 150
WERAM-Caf-0163 ENSCAFP00000023208.3 Canis familiaris 31 8e-36 150
WERAM-Sah-0178 ENSSHAP00000018525.1 Sarcophilus harrisii 31 8e-36 150
WERAM-Caj-0077 ENSCJAP00000012842.1 Callithrix jacchus 31 8e-36 150
WERAM-Mum-0106 ENSMUSP00000005108.7 Mus musculus 31 9e-36 150
WERAM-Ten-0151 ENSTNIP00000000510.1 Tetraodon nigroviridis 32 9e-36 150
WERAM-Mod-0172 ENSMODP00000022937.3 Monodelphis domestica 31 1e-35 150
WERAM-Lem-0001 CBY01560 Leptosphaeria maculans 36 1e-35 150
WERAM-Bot-0174 ENSBTAP00000027280.5 Bos taurus 31 1e-35 150
WERAM-Otg-0005 ENSOGAP00000000280.2 Otolemur garnettii 31 1e-35 150
WERAM-Ova-0126 ENSOARP00000012800.1 Ovis aries 31 1e-35 150
WERAM-Eqc-0173 ENSECAP00000019283.1 Equus caballus 31 1e-35 150
WERAM-Chs-0147 ENSCSAP00000008231.1 Chlorocebus sabaeus 31 1e-35 150
WERAM-Myl-0067 ENSMLUP00000005634.2 Myotis lucifugus 31 1e-35 149
WERAM-Spr-0023 CBQ72974 Sporisorium reilianum 41 1e-35 149
WERAM-Tut-0099 ENSTTRP00000008413.1 Tursiops truncatus 31 1e-35 149
WERAM-Aim-0056 ENSAMEP00000004769.1 Ailuropoda melanoleuca 31 1e-35 149
WERAM-Leo-0093 ENSLOCP00000012401.1 Lepisosteus oculatus 31 1e-35 149
WERAM-Mup-0210 ENSMPUP00000017918.1 Mustela putorius furo 31 1e-35 149
WERAM-Fec-0141 ENSFCAP00000013303.3 Felis catus 31 1e-35 149
WERAM-Scs-0004 EDN96551 Sclerotinia sclerotiorum 37 1e-35 149
WERAM-Mam-0119 ENSMMUP00000017950.2 Macaca mulatta 31 1e-35 149
WERAM-Nol-0018 ENSNLEP00000002465.1 Nomascus leucogenys 31 1e-35 149
WERAM-Paa-0010 ENSPANP00000008905.1 Papio anubis 31 2e-35 149
WERAM-Poa-0038 ENSPPYP00000004709.1 Pongo abelii 31 2e-35 149
WERAM-Chh-0061 ENSCHOP00000006896.1 Choloepus hoffmanni 31 2e-35 149
WERAM-Cap-0120 ENSCPOP00000009555.2 Cavia porcellus 40 2e-35 149
WERAM-Orc-0129 ENSOCUP00000011159.2 Oryctolagus cuniculus 31 2e-35 149
WERAM-Mim-0054 ENSMICP00000005521.1 Microcebus murinus 40 2e-35 149
WERAM-Soa-0132 ENSSARP00000013044.1 Sorex araneus 31 2e-35 149
WERAM-Tas-0106 ENSTSYP00000011121.1 Tarsius syrichta 40 2e-35 149
WERAM-Loa-0058 ENSLAFP00000004277.3 Loxodonta africana 40 2e-35 149
WERAM-Ran-0255 ENSRNOP00000072712.1 Rattus norvegicus 40 2e-35 149
WERAM-Pytr-0035 EDU44093 Pyrenophora triticirepentis 36 3e-35 148
WERAM-Ict-0007 ENSSTOP00000000336.2 Ictidomys tridecemlineatus 40 3e-35 148
WERAM-Anp-0001 ENSAPLP00000000531.1 Anas platyrhynchos 30 3e-35 148
WERAM-Dar-0006 ENSDARP00000023794.8 Danio rerio 31 3e-35 148
WERAM-Vip-0044 ENSVPAP00000003974.1 Vicugna pacos 41 3e-35 148
WERAM-Gaga-0123 ENSGALP00000021168.4 Gallus gallus 30 3e-35 148
WERAM-Fia-0057 ENSFALP00000004074.1 Ficedula albicollis 30 4e-35 148
WERAM-Tag-0155 ENSTGUP00000013014.1 Taeniopygia guttata 30 4e-35 148
WERAM-Pyt-0008 EFQ94561 Pyrenophora teres 36 4e-35 147
WERAM-Usm-0016 UM02582P0 Ustilago maydis 40 4e-35 147
Created Date 25-Jun-2016