WERAM Information

Tag Content
WERAM ID WERAM-Bro-0091
Ensembl Protein ID Bo5g019720.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo5g019720 Bo5g019720.1 Bo5g019720.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 7.20e-12 46.8 190 240
Organism Brassica oleracea
Domain Profile
  Me_Reader PHD
       PHD.txt   2 tiClvCgkddeg.ekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                   ++C vCg++d+g e++++ Cd+C++wfH+kCvk++  +++  k++ CpsC 
  Bo5g019720.1 190 EFCGVCGESDDGeEEFWIWCDTCERWFHGKCVKITPARAEHIKHYKCPSCC 240
                   69****7666551556*******************666664479******6 PP
Protein Sequence
(Fasta)		MEGRAAEDVF KDFRGRRAGL IKALTTDVRK FYDKCDPANE NLCLYGLPNG SWELNLPVDE 60
VPPELPEPAL GINFSRDGMP EENWVSLIAV HSDSWLIAVA FYFGARFSFD KNERMRLFRM 120
INDLPTIFEV VTGNAKQSKD QSGNHNSSRS KSGGVKTKAS KRSPPPPPPP PREESESGDD 180
DGEEDEGQGE FCGVCGESDD GEEEFWIWCD TCERWFHGKC VKITPARAEH IKHYKCPSCC 240
GANKKHRA 248
Nucleotide Sequence
(Fasta)		ATGGAGGGAC GCGCTGCTGA AGATGTGTTT AAGGACTTTA GGGGACGAAG AGCTGGTCTC 60
ATCAAAGCTC TCACTACTGA TGTACGCAAG TTTTACGATA AGTGTGACCC TGCCAATGAA 120
AACTTGTGTC TCTACGGGCT TCCAAATGGG TCGTGGGAGC TTAATCTTCC CGTCGACGAG 180
GTCCCTCCTG AGCTTCCTGA ACCAGCTCTT GGCATCAACT TCTCAAGGGA CGGTATGCCA 240
GAGGAAAACT GGGTCTCTTT GATTGCTGTT CACTCTGACT CTTGGCTCAT CGCTGTTGCC 300
TTCTACTTTG GTGCACGTTT CTCTTTTGAT AAAAACGAGA GGATGAGGCT GTTCCGGATG 360
ATAAATGATC TCCCAACCAT TTTCGAGGTT GTAACTGGCA ACGCAAAGCA ATCCAAGGAT 420
CAATCTGGTA ACCACAACAG TAGCAGAAGC AAGTCTGGTG GTGTCAAGAC TAAGGCTTCA 480
AAGAGATCCC CACCACCACC ACCACCACCA CCAAGAGAAG AAAGTGAGAG CGGAGATGAT 540
GATGGGGAGG AAGACGAGGG GCAAGGTGAG TTTTGTGGCG TGTGTGGAGA GAGCGATGAT 600
GGAGAAGAGG AGTTCTGGAT ATGGTGTGAT ACTTGTGAGA GATGGTTCCA TGGAAAATGC 660
GTCAAGATCA CACCTGCAAG GGCTGAGCAC ATCAAACATT ACAAATGCCC AAGTTGCTGC 720
GGTGCCAACA AGAAACACAG AGCTTGA 748
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0131 Bra026210.1-P Brassica rapa 92 5e-106 380
WERAM-Art-0010 AT1G14510.1 Arabidopsis thaliana 71 2e-77 286
WERAM-Arl-0043 fgenesh2_kg.1__ 1579__ AT1G14510.1 Arabidopsis lyrata 71 3e-77 285
WERAM-Prp-0081 EMJ24886 Prunus persica 69 1e-75 280
WERAM-Pot-0035 POPTR_0003s04070.1 Populus trichocarpa 67 3e-75 278
WERAM-Glm-0216 GLYMA17G00630.1 Glycine max 66 5e-75 278
WERAM-Thc-0075 EOY26404 Theobroma cacao 68 2e-72 269
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 63 3e-72 268
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 65 4e-72 268
WERAM-Met-0117 KEH32736 Medicago truncatula 64 4e-72 268
WERAM-Sei-0086 Si023009m Setaria italica 62 6e-72 267
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 64 7e-72 267
WERAM-Amt-0032 ERN11177 Amborella trichopoda 63 2e-71 266
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 62 3e-71 265
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 62 3e-71 265
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 62 3e-71 265
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 62 3e-71 265
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 62 3e-71 265
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 62 3e-71 265
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 62 3e-71 265
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 62 3e-71 265
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 62 4e-71 265
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 61 6e-71 264
WERAM-Mua-0134 GSMUA_Achr8P32300_001 Musa acuminata 61 6e-71 264
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 64 9e-71 263
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 61 8e-70 260
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 63 1e-69 259
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 59 2e-69 259
WERAM-Aet-0106 EMT19247 Aegilops tauschii 61 2e-69 259
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 60 3e-68 255
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 60 4e-66 248
WERAM-Php-0137 PP1S97_167V6.1 Physcomitrella patens 59 1e-64 243
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 60 3e-63 238
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 57 3e-61 231
Created Date 25-Jun-2016