WERAM Information

Tag Content
WERAM ID WERAM-Bro-0019
Ensembl Protein ID Bo1g141160.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo1g141160 Bo1g141160.1 Bo1g141160.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 3.10e-10 41.6 194 244
Organism Brassica oleracea
Domain Profile
  Me_Reader PHD
       PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                   t+C  Cg +++++++++ Cd C++w+H+kCvk++  ++ + k++ Cp C +
  Bo1g141160.1 194 TLCGSCGGNYTQDEFWIGCDVCERWYHGKCVKITPAKADSIKQYKCPPCCA 244
                   78****99999999********************555554489******75 PP
Protein Sequence
(Fasta)		MAAAVSSNPR TVEEIFKDYT SRRAALLRAL TKDVDDFYSQ CDPEKENLCL YGHPNESWEV 60
NLPAEEVPPE LPEPALGINF ARDGMQRKDW LSLVAVHSDC WLLSVSFYFG ARLNRNERKR 120
LFSLINDLPT LFDVVTGRKP IKDNKPSSDS GSKSRNGGTK RSIEGQPKNT TPKLMEERYE 180
EEEDEEEEDE HGDTLCGSCG GNYTQDEFWI GCDVCERWYH GKCVKITPAK ADSIKQYKCP 240
PCCAKKGGRQ
Nucleotide Sequence
(Fasta)		ATGGCCGCCG CCGTCTCCTC TAACCCTCGC ACCGTCGAAG AGATCTTCAA AGATTACACC 60
TCTCGCCGCG CCGCTCTTCT TCGCGCTCTA ACCAAAGATG TTGATGATTT TTACTCTCAA 120
TGCGATCCGG AGAAGGAGAA TTTGTGTTTG TATGGACATC CGAATGAGTC GTGGGAAGTG 180
AATCTACCGG CGGAGGAAGT TCCACCGGAG CTACCTGAGC CAGCGCTTGG TATCAATTTC 240
GCTAGAGATG GTATGCAGAG GAAAGATTGG CTCTCTCTCG TGGCTGTCCA TAGTGATTGT 300
TGGTTGCTCT CTGTTTCTTT CTACTTTGGT GCTCGCCTTA ATCGCAACGA GAGGAAGCGG 360
CTATTCAGTC TGATCAACGA TCTCCCAACT CTCTTTGATG TAGTGACTGG TAGGAAACCC 420
ATCAAAGACA ATAAACCAAG CTCAGACTCC GGAAGCAAAT CCAGAAACGG TGGCACTAAG 480
AGATCAATAG AAGGGCAGCC AAAGAACACA ACACCAAAAC TGATGGAAGA GAGGTACGAA 540
GAGGAGGAGG ATGAAGAGGA AGAAGACGAG CATGGAGACA CTCTCTGTGG AAGCTGTGGA 600
GGCAATTACA CACAAGACGA GTTCTGGATT GGCTGTGATG TTTGTGAGCG TTGGTACCAT 660
GGAAAATGCG TTAAGATCAC TCCCGCCAAA GCAGACAGCA TCAAGCAGTA TAAATGCCCT 720
CCTTGCTGTG CAAAGAAAGG AGGAAGACAG TGA 754
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0166 Bra034169.1-P Brassica rapa 99 2e-123 438
WERAM-Arl-0058 fgenesh2_kg.3__ 1160__ AT3G11200.1 Arabidopsis lyrata 92 4e-106 381
WERAM-Art-0068 AT3G11200.1 Arabidopsis thaliana 91 1e-105 379
WERAM-Sot-0075 PGSC0003DMT400059399 Solanum tuberosum 78 2e-95 345
WERAM-Prp-0085 EMJ19499 Prunus persica 77 3e-93 338
WERAM-Thc-0118 EOY17763 Theobroma cacao 77 8e-93 337
WERAM-Sol-0105 Solyc09g005360.2.1 Solanum lycopersicum 77 2e-91 332
WERAM-Glm-0003 GLYMA01G29950.1 Glycine max 76 3e-91 332
WERAM-Pot-0155 POPTR_0016s12420.1 Populus trichocarpa 77 3e-90 328
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 78 7e-90 327
WERAM-Met-0150 KEH23172 Medicago truncatula 76 3e-89 325
WERAM-Amt-0010 ERN05231 Amborella trichopoda 74 4e-89 324
WERAM-Mua-0107 GSMUA_Achr7P15530_001 Musa acuminata 73 1e-86 317
WERAM-Orp-0071 OPUNC07G07630.1 Oryza punctata 68 2e-83 305
WERAM-Orm-0069 OMERI07G06560.1 Oryza meridionalis 68 3e-83 305
WERAM-Orgl-0051 OGLUM05G06240.1 Oryza glumaepatula 68 3e-83 305
WERAM-Org-0074 ORGLA07G0067800.1 Oryza glaberrima 68 3e-83 305
WERAM-Orni-0073 ONIVA07G06790.1 Oryza nivara 67 9e-83 303
WERAM-Ors-0066 OS07T0233300-01 Oryza sativa 67 1e-82 303
WERAM-Orr-0075 ORUFI07G08080.1 Oryza rufipogon 67 1e-82 303
WERAM-Ori-0080 BGIOSGA024567-PA Oryza indica 67 1e-82 303
WERAM-Lep-0074 LPERR07G06880.1 Leersia perrieri 66 1e-82 303
WERAM-Sob-0020 Sb02g006980.1 Sorghum bicolor 65 2e-81 299
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 65 2e-80 295
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 64 6e-80 294
WERAM-Zem-0003 AC225147.4_FGP003 Zea mays 66 9e-79 290
WERAM-Sei-0134 Si037171m Setaria italica 63 2e-78 289
WERAM-Orb-0041 OBART03G38930.1 Oryza barthii 66 2e-77 286
WERAM-Orbr-0060 OB05G14070.1 Oryza brachyantha 62 2e-76 282
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 66 4e-76 281
WERAM-Brd-0027 BRADI1G53660.1 Brachypodium distachyon 63 7e-76 280
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 63 6e-75 277
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 63 8e-75 277
WERAM-Aet-0099 EMT23706 Aegilops tauschii 56 1e-69 259
Created Date 25-Jun-2016