WERAM Information

Tag Content
WERAM ID WERAM-Brd-0012
Ensembl Protein ID BRADI1G24580.1
Gene Name BRADI1G24580.1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
BRADI1G24580 BRADI1G24580.1 BRADI1G24580.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 7.40e-05 23.4 274 334
Organism Brachypodium distachyon
Domain Profile
  Ac_Reader Bromodomain
       BROMO.txt   8 pFrepvdpqleipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenk 68 
                     +++++ d q +   Y+++i++++d+    +++++g  ss++e++kD+   +nN  a++++ 
  BRADI1G24580.1 274 MLQHQIDIQRKRARYKKMIRQHIDFRMLHSKIKSGAISSANELLKDMLVFVNNVLAFYPKA 334
                     55666666666779*******************************************9875 PP
Protein Sequence
(Fasta)		MVVVVAKEEE GEEGKEGRGG VAWGTWEELV LGGAVIRHGA AAWDTVAAEL RCRSPHRFSP 60
EECEAKFSEI QARYSACKGD AWFDELRKQR IAELKRELQK SESLIGSLQS VIESLSNSKH 120
EDVNSGCHTE SCSPAEIAAD TNSSSKELSK DRSSAASFTE EASNSQKSQK VQNTSAETLL 180
EPHVEKGCTE GGLLWGSRKK RGLRDKKVIL MADDSSREGE NTSTSCIQIE GSSEGRMNDS 240
KTSKIEPSAS VRETAKQKLG EILNSISSQG DCYMLQHQID IQRKRARYKK MIRQHIDFRM 300
LHSKIKSGAI SSANELLKDM LVFVNNVLAF YPKATLEHMA AIELRGLVCK TLQQSSSITS 360
MNSGEAGIAS DLVTKKTAAG IASDPVIKKT AVGIAGDPLI KKTARGIAGD PVIKKTAAGI 420
TSGPVIKKTA AGIASDPVNK KTAAGISSDP VNKKPAAGVT SDPVIKKTAT GVTSSPVIKK 480
TVTGVPSAPV IKKTATGVAS APVIKKIART MPPVRHVPRD AKRSKVPAKE AGSTASQGEA 540
KDLPGDAAPS ANEKSTGRSP PAKKRGVGRP PKSGQKRAAP QSQQDSPNKG RKRTRR 596
Nucleotide Sequence
(Fasta)		AGCGCCCCTC TCTCCCTCCG CTTCTCCTAC CTGGCCCTAT CGTCTCCGCG ATCGCACGCC 60
CGGACCCCAA ACCCGGACGA GACCCAAAAA GGGCAAGCAG AGAATTTTCT GCCCGAACGA 120
GCGAGCGAGC GAGCGAGAGC GTCCGTTCGA TGGTGGTTGT GGTGGCGAAG GAGGAGGAGG 180
GGGAGGAGGG GAAGGAGGGG CGCGGCGGCG TGGCGTGGGG GACGTGGGAG GAGCTGGTGC 240
TGGGCGGCGC CGTAATCCGC CACGGGGCCG CCGCGTGGGA CACCGTCGCC GCCGAGCTGC 300
GCTGCCGCTC CCCGCACCGC TTCTCGCCCG AGGAATGTGA AGCAAAATTT TCAGAGATAC 360
AAGCACGCTA CTCTGCATGC AAGGGCGATG CTTGGTTTGA CGAACTTCGC AAACAGAGAA 420
TTGCTGAATT GAAACGGGAG CTTCAGAAGT CAGAAAGTCT TATTGGATCC TTGCAGTCTG 480
TGATTGAAAG CCTTAGCAAT AGCAAACATG AGGATGTCAA CTCTGGATGC CACACTGAAT 540
CATGTTCACC GGCTGAAATT GCAGCTGATA CTAACTCCTC AAGCAAAGAA TTGTCCAAAG 600
ATAGATCATC CGCTGCTAGC TTCACTGAAG AAGCAAGCAA CAGTCAGAAA TCTCAGAAAG 660
TTCAAAATAC ATCAGCCGAG ACATTGTTAG AGCCCCATGT TGAAAAGGGC TGTACAGAAG 720
GTGGTTTGCT TTGGGGCTCT AGAAAGAAAA GGGGTTTGAG GGATAAAAAG GTTATTCTGA 780
TGGCTGATGA TAGTAGCAGA GAGGGTGAGA ATACATCTAC ATCATGCATA CAGATAGAGG 840
GTTCCTCTGA GGGCCGGATG AATGACTCAA AAACTTCAAA GATAGAGCCT AGTGCATCTG 900
TGCGTGAGAC AGCGAAACAA AAGTTGGGAG AGATTTTGAA TAGTATATCT TCTCAAGGTG 960
ACTGTTATAT GTTGCAACAC CAAATTGATA TCCAGCGGAA GAGGGCTAGA TACAAGAAGA 1020
TGATCCGCCA GCATATCGAC TTCAGAATGC TTCATTCTAA GATCAAGAGT GGTGCTATCT 1080
CTTCTGCCAA TGAGCTCCTA AAAGACATGC TCGTGTTCGT GAATAATGTC CTTGCTTTTT 1140
ATCCAAAGGC TACATTGGAG CACATGGCTG CAATTGAGCT TCGAGGTCTT GTATGCAAAA 1200
CATTGCAACA GAGCTCAAGC ATTACCTCCA TGAATTCGGG GGAGGCAGGG ATAGCTAGTG 1260
ACCTTGTAAC CAAGAAGACT GCGGCAGGGA TAGCTAGCGA CCCAGTAATC AAGAAGACCG 1320
CTGTAGGCAT AGCTGGTGAC CCTCTAATCA AGAAGACTGC AAGAGGGATA GCTGGTGACC 1380
CTGTAATCAA GAAGACTGCA GCAGGGATAA CCAGTGGCCC TGTAATCAAG AAGACTGCAG 1440
CAGGGATAGC CAGTGACCCT GTCAACAAGA AGACTGCGGC AGGGATATCC AGTGACCCTG 1500
TCAACAAGAA ACCTGCGGCA GGGGTAACCA GTGACCCTGT GATCAAGAAG ACTGCGACAG 1560
GGGTAACCAG TTCCCCTGTG ATCAAGAAGA CTGTGACAGG GGTACCTAGT GCCCCTGTGA 1620
TCAAGAAGAC TGCGACAGGG GTGGCCAGTG CCCCTGTGAT CAAGAAGATT GCTCGAACCA 1680
TGCCGCCCGT ACGGCATGTG CCTCGTGATG CAAAGAGAAG CAAGGTTCCT GCAAAGGAGG 1740
CTGGAAGTAC AGCCAGTCAG GGCGAGGCCA AGGACCTCCC TGGCGATGCA GCACCATCAG 1800
CTAATGAAAA ATCTACTGGG AGAAGTCCGC CAGCCAAGAA GCGAGGCGTC GGGCGGCCTC 1860
CAAAGAGCGG GCAGAAGCGT GCTGCGCCGC AGAGCCAGCA AGACAGCCCT AACAAAGGAA 1920
GGAAGAGGAC CCGGCGGTGA AGGTAAAAAG CCTTGAATAG GCAGAAGCGT GTCGTTTTTT 1980
GGTGCACAGC CTGTAAAAGG AGGCCATAGA CTAGCTCCAT CCAGTGTTTG TACCTGTCGA 2040
AGACTAGGTG AAAGGAGTTA GGATGTTGTA AGACTAAGGG CAAGGAGTTG CAATTTTTCC 2100
TGGTGTTTTT CCATGCACAG CTAGATGAAC TAGTATCTTC ATTTTTCCTA CAGAGATGTA 2160
ATCGATGTTA TAGGCCATAT GTGTCTGTCT GTCTTATACT GTACTTACAT ACCTATAGAA 2220
GTCTTGATCA GATATA 2237
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Hov-0062 MLOC_56125.1 Hordeum vulgare 69 0.0 729
WERAM-Tra-0071 Traes_2BS_832F28506.1 Triticum aestivum 67 0.0 716
WERAM-Aet-0053 EMT30824 Aegilops tauschii 67 0.0 711
WERAM-Tru-0068 TRIUR3_26205-P1 Triticum urartu 60 3e-173 605
WERAM-Orr-0081 ORUFI07G19680.1 Oryza rufipogon 59 3e-132 469
WERAM-Ori-0078 BGIOSGA024080-PA Oryza indica 59 3e-132 469
WERAM-Orni-0041 ONIVA04G17620.1 Oryza nivara 59 8e-132 468
WERAM-Ors-0071 OS07T0565300-01 Oryza sativa 59 9e-132 468
WERAM-Zem-0131 GRMZM2G402804_P01 Zea mays 64 9e-71 265
WERAM-Sob-0035 Sb02g036530.1 Sorghum bicolor 65 2e-67 254
WERAM-Sei-0112 Si029233m Setaria italica 64 4e-65 246
WERAM-Thc-0079 EOY28363 Theobroma cacao 37 1e-47 188
WERAM-Sol-0123 Solyc10g009160.2.1 Solanum lycopersicum 37 3e-46 184
WERAM-Sot-0030 PGSC0003DMT400028077 Solanum tuberosum 35 4e-45 180
WERAM-Prp-0058 EMJ13280 Prunus persica 34 2e-41 168
WERAM-Glm-0164 GLYMA13G25380.1 Glycine max 37 8e-41 166
WERAM-Bro-0014 Bo1g098000.1 Brassica oleracea 35 3e-38 157
WERAM-Amt-0004 ERN03421 Amborella trichopoda 60 5e-31 133
WERAM-Met-0107 AES90380 Medicago truncatula 57 6e-30 129
WERAM-Pot-0044 POPTR_0004s03710.1 Populus trichocarpa 35 4e-27 120
WERAM-Mua-0141 GSMUA_Achr9P20120_001 Musa acuminata 38 7e-19 93.2
WERAM-Brr-0154 Bra031444.1-P Brassica rapa 45 5e-17 87.0
WERAM-Orp-0090 OPUNC08G18190.1 Oryza punctata 39 5e-17 87.0
WERAM-Viv-0085 VIT_13s0156g00340.t01 Vitis vinifera 35 2e-15 81.6
WERAM-Art-0022 AT1G61215.1 Arabidopsis thaliana 40 3e-15 81.3
WERAM-Org-0093 ORGLA08G0177200.1 Oryza glaberrima 35 4e-15 80.9
WERAM-Orgl-0092 OGLUM08G21320.1 Oryza glumaepatula 35 4e-15 80.5
WERAM-Arl-0120 scaffold_200471.1 Arabidopsis lyrata 39 1e-14 79.3
WERAM-Php-0024 PP1S148_42V6.1 Physcomitrella patens 40 2e-14 78.6
WERAM-Lep-0092 LPERR08G16990.1 Leersia perrieri 39 3e-14 77.4
WERAM-Sem-0100 EFJ37441 Selaginella moellendorffii 41 4e-14 77.4
WERAM-Orb-0096 OBART08G20090.1 Oryza barthii 37 1e-10 65.5
WERAM-Orl-0103 KN541195.1_FGP005 Oryza longistaminata 34 6e-08 57.0
Created Date 25-Jun-2016