WERAM Information

Tag Content
WERAM ID WERAM-Arl-0041
Ensembl Protein ID fgenesh1_pm.C_scaffold_9000002
Gene Name SDG22
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh1_pm.C_scaffold_9000002 fgenesh1_pm.C_scaffold_9000002 fgenesh1_pm.C_scaffold_9000002
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT SUV39 4.20e-35 121.6 439 637
Organism Arabidopsis lyrata
Domain Profile
  HMT SUV39
                       SUV39.txt  12 GwGvrclddi.akgsFvciyaGeiltdd 38 
                                     G+G  cl +  + g+F   y G++++++
  fgenesh1_pm.C_scaffold_9000002 439 GCGSGCLCEAkNSGEFAYDYHGKLIRQK 466
                                     666666644415799********99875 PP
                       SUV39.txt   2 rLqvfktenkGwGvrclddiakgsFvciyaGeiltddeaekegleegdeyladldskesvenlkegyesdvplssdssn 80 
                                     rL+vf++ ++GwGvr+ld +++g+F+c+yaG  lt+++a+   +++gd+ ++  + +++ ++   +  +       + +
  fgenesh1_pm.C_scaffold_9000002 494 RLEVFRSLETGWGVRSLDILHAGAFICEYAGVALTREQANIL-TMNGDTLVYPARFSSARWEAWGDLSQV----LADFE 567
                                     8**************************************998.788888888887776665444333333....34568 PP
                       SUV39.txt  81 trqekdkeeseyiidakkegnvgrflnHscspNlfvqnvfvdthdlrfprvafFaskrikagtELtwdYg 150
                                     + ++ +    ++ +d +k+ nv+++++Hs++pN++vq v++d+++l+fprv++Fa+++i+++tEL+ dYg
  fgenesh1_pm.C_scaffold_9000002 568 RPSYPEIPPVDFAMDVSKMRNVACYISHSTDPNVIVQLVLHDHNSLMFPRVMLFAAENIPPMTELSLDYG 637
                                     8999999**************************************************************6 PP
Protein Sequence
(Fasta)		MGSSHIPLDP SLNPSPSLIP KLEPVTESTQ NLSFQLPNTN PQALISSPIS NFNEATNFSS 60
DYITVAETFR SAFAQRLKRH DDVTVLDSLT GAIVPVEENP DPEPIPVSYS TNDASPSVVV 120
TRRPKPQQRS SELVRITDVG PEGERQFREH VRKTRMIYDS LRMFLMMEEV KLNGFGGRKG 180
RPDSKAASMM KDCMLWLNRD KRIVGSIPGV QVGDIFFFRL ELCVMGLHGQ TQAGIDYLTG 240
SLSSNGEPIA TSVIVSGGYE DDDDQGDVIM YTGHGGQDKL GRQAEHQKLE GGNLAMERSM 300
YYGIEVRVIR GLKYENSVSS KVYVYDGLFR IVDSWFDVGK SGFGVFKYRL ERIEGQAEMG 360
SSILKLARTL KTNPLSVRPR GYISSDISNR KENVPVYLFN DIDNDQEPLY YEYLATTSFP 420
PGLFVQRSDS ASGCDCIKGC GSGCLCEAKN SGEFAYDYHG KLIRQKPLIH ECGAACRCPP 480
SCRNRVTQKG LRNRLEVFRS LETGWGVRSL DILHAGAFIC EYAGVALTRE QANILTMNGD 540
TLVYPARFSS ARWEAWGDLS QVLADFERPS YPEIPPVDFA MDVSKMRNVA CYISHSTDPN 600
VIVQLVLHDH NSLMFPRVML FAAENIPPMT ELSLDYGVAD DWTAKLAICN
Nucleotide Sequence
(Fasta)		ATGGGTTCTT CTCATATTCC TCTTGATCCG TCTCTAAATC CGTCACCTTC ACTGATCCCA 60
AAGCTTGAAC CAGTCACTGA ATCAACCCAA AACTTGTCCT TTCAACTTCC AAACACAAAC 120
CCACAAGCCC TAATTTCATC ACCCATCTCC AATTTCAACG AAGCCACAAA CTTTTCCTCA 180
GATTACATCA CCGTCGCCGA GACATTCCGG TCCGCCTTCG CTCAACGTCT TAAACGTCAC 240
GATGATGTTA CGGTTCTTGA TTCCTTAACC GGAGCAATTG TACCGGTTGA GGAGAATCCA 300
GACCCGGAAC CGATTCCGGT TTCTTACTCA ACCAATGACG CTTCACCGTC GGTTGTTGTT 360
ACTCGACGGC CTAAGCCACA GCAACGTTCG TCGGAGCTAG TGAGGATCAC TGATGTTGGA 420
CCTGAAGGTG AGAGACAGTT TCGTGAACAT GTGAGGAAGA CGAGAATGAT TTATGATTCA 480
CTTAGGATGT TCTTGATGAT GGAAGAAGTT AAACTTAATG GGTTTGGTGG AAGAAAAGGT 540
AGACCTGATA GTAAAGCTGC TTCAATGATG AAAGATTGTA TGTTATGGTT GAATCGTGAT 600
AAACGAATCG TCGGTTCGAT TCCCGGTGTT CAAGTTGGGG ATATCTTCTT CTTTAGGCTT 660
GAGTTATGTG TTATGGGTTT ACATGGGCAA ACACAAGCTG GGATTGATTA TCTTACAGGG 720
AGTCTTAGTT CTAATGGAGA GCCAATTGCT ACTAGTGTGA TTGTTTCAGG TGGTTATGAG 780
GATGATGATG ATCAAGGAGA TGTGATTATG TATACAGGTC ATGGTGGGCA AGATAAGCTT 840
GGAAGGCAAG CTGAACATCA GAAGTTGGAA GGTGGGAATC TTGCGATGGA ACGGAGTATG 900
TATTATGGGA TTGAAGTTAG GGTGATTAGA GGGTTGAAGT ATGAGAACTC AGTTTCTAGT 960
AAAGTTTATG TTTATGATGG GTTGTTTAGG ATTGTTGATT CTTGGTTTGA TGTTGGGAAA 1020
TCTGGTTTCG GTGTGTTTAA ATATAGGCTG GAGAGGATTG AAGGGCAGGC TGAGATGGGT 1080
AGTTCGATTT TGAAGCTTGC TAGGACTCTT AAAACTAATC CATTGTCTGT GAGACCGAGA 1140
GGTTATATTA GTTCTGATAT CTCGAATAGG AAGGAGAATG TTCCTGTGTA TTTGTTTAAT 1200
GACATTGACA ACGATCAAGA ACCTTTGTAT TATGAGTACC TTGCGACAAC TTCGTTTCCT 1260
CCTGGCTTAT TTGTTCAACG GAGCGATAGT GCAAGTGGAT GTGACTGTAT CAAAGGCTGT 1320
GGCAGTGGCT GCCTTTGTGA AGCCAAGAAT TCAGGTGAGT TTGCTTATGA TTATCATGGA 1380
AAGTTAATAA GACAGAAACC GTTGATACAT GAATGTGGAG CGGCGTGTCG GTGCCCTCCA 1440
AGCTGTCGAA ACCGTGTGAC TCAAAAGGGT TTGAGGAATA GACTAGAGGT GTTTAGGTCA 1500
CTGGAAACGG GTTGGGGAGT TCGGTCTTTG GATATTTTAC ATGCTGGTGC TTTTATTTGT 1560
GAATATGCTG GGGTTGCTTT GACAAGGGAA CAAGCCAACA TTCTGACCAT GAACGGTGAT 1620
ACATTGGTAT ATCCTGCTCG GTTTTCCTCT GCGAGATGGG AAGCTTGGGG AGATTTGTCT 1680
CAGGTCCTGG CTGATTTCGA GCGGCCTTCT TATCCTGAGA TTCCTCCTGT TGATTTCGCA 1740
ATGGATGTGT CCAAGATGAG AAATGTTGCT TGTTACATAA GCCACAGTAC TGATCCGAAT 1800
GTCATTGTCC AGTTAGTACT CCATGATCAC AACAGTCTGA TGTTCCCTAG AGTCATGCTT 1860
TTTGCTGCTG AAAACATTCC TCCCATGACT GAGCTCAGCC TTGATTACGG AGTTGCTGAT 1920
GATTGGACCG CCAAGCTTGC CATTTGTAAT TAA 1954
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0099 AT4G13460.2 Arabidopsis thaliana 89 0.0 1156
WERAM-Bro-0154 Bo8g083410.1 Brassica oleracea 78 0.0 1024
WERAM-Brr-0035 Bra007048.1-P Brassica rapa 78 0.0 1021
WERAM-Pot-0114 POPTR_0010s07480.1 Populus trichocarpa 66 0.0 859
WERAM-Thc-0056 EOY06233 Theobroma cacao 66 0.0 855
WERAM-Prp-0044 EMJ28171 Prunus persica 63 0.0 833
WERAM-Viv-0026 VIT_05s0049g02220.t01 Vitis vinifera 63 0.0 811
WERAM-Sol-0118 Solyc09g090810.1.1 Solanum lycopersicum 58 0.0 778
WERAM-Sot-0005 PGSC0003DMT400003956 Solanum tuberosum 63 0.0 774
WERAM-Glm-0079 GLYMA07G19420.1 Glycine max 59 0.0 751
WERAM-Met-0016 KEH40794 Medicago truncatula 60 0.0 710
WERAM-Orb-0074 OBART07G12290.1 Oryza barthii 56 0.0 631
WERAM-Ori-0084 BGIOSGA025596-PA Oryza indica 56 0.0 631
WERAM-Brd-0015 BRADI1G29010.1 Brachypodium distachyon 55 0.0 630
WERAM-Lep-0075 LPERR07G10390.1 Leersia perrieri 54 1e-180 630
WERAM-Ors-0067 OS07T0435900-01 Oryza sativa 56 3e-180 629
WERAM-Orm-0070 OMERI07G09810.1 Oryza meridionalis 56 6e-180 628
WERAM-Orr-0076 ORUFI07G12410.1 Oryza rufipogon 56 3e-179 625
WERAM-Orgl-0071 OGLUM07G11790.1 Oryza glumaepatula 56 3e-179 625
WERAM-Orp-0072 OPUNC07G10970.1 Oryza punctata 55 5e-179 625
WERAM-Sei-0110 Si029125m Setaria italica 55 4e-178 622
WERAM-Sob-0021 Sb02g010210.1 Sorghum bicolor 55 2e-177 620
WERAM-Tra-0051 Traes_2AS_A204857F71.1 Triticum aestivum 54 1e-176 617
WERAM-Tru-0091 TRIUR3_32787-P1 Triticum urartu 54 5e-176 615
WERAM-Hov-0102 MLOC_71915.1 Hordeum vulgare 54 2e-175 613
WERAM-Zem-0024 GRMZM2G034288_P01 Zea mays 54 5e-174 608
WERAM-Mua-0084 GSMUA_Achr5P13120_001 Musa acuminata 53 3e-171 599
WERAM-Orbr-0083 OB07G18500.1 Oryza brachyantha 58 6e-170 595
WERAM-Orl-0087 KN539973.1_FGP004 Oryza longistaminata 60 8e-168 588
WERAM-Amt-0043 ERN15731 Amborella trichopoda 51 1e-154 544
WERAM-Org-0094 ORGLA08G0193900.1 Oryza glaberrima 47 3e-129 459
WERAM-Orni-0096 ONIVA09G01180.1 Oryza nivara 47 4e-129 459
WERAM-Aet-0062 EMT00374 Aegilops tauschii 37 8e-99 358
WERAM-Sem-0004 EFJ22703 Selaginella moellendorffii 41 5e-96 349
WERAM-Php-0129 PP1S9_150V6.1 Physcomitrella patens 39 3e-95 347
Created Date 25-Jun-2016