WERAM Information

Tag Content
WERAM ID WERAM-Brr-0035
Ensembl Protein ID Bra007048.1-P
Gene Name SDG22
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra007048 Bra007048.1 Bra007048.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT SUV39 2.90e-34 119.2 474 617
Organism Brassica rapa
Domain Profile
  HMT SUV39
      SUV39.txt   2 rLqvfktenkGwGvrclddiakgsFvciyaGeiltddeaekegleegdeyladldskesvenlkegyesdvplssdssntrqekdkeeseyiidak 97 
                    rL+vf++ ++GwGvrcld +++g+F+c+y+G  lt+++a+   +++gd+ ++  +  ++ ++   +  + +p    + ++ ++ +    +y +d +
  Bra007048.1-P 474 RLEVFRSVETGWGVRCLDILHAGAFICEYVGVALTREQANIL-TMNGDTLVYPARFCSDRWKDWGDLSQVFP----DYERPSYRQIPPVDYAMDVS 564
                    8**************************************998.88999999999998888877777777775....467888999999******** PP
      SUV39.txt  98 kegnvgrflnHscspNlfvqnvfvdthdlrfprvafFaskrikagtELtwdYg 150
                    k  nv+++++Hs + N++vq v++d+++l+fprv++Fa+++i+++tEL+ dYg
  Bra007048.1-P 565 KLRNVACYISHSNDSNVIVQMVLHDHNNLMFPRVMLFAAENIPPMTELSLDYG 617
                    ****************************************************6 PP
Protein Sequence
(Fasta)		MTSHIPMVIP KPEPVTDSSP QTPIPPSSFF NFNTTTTQSP LEPNLYTEFT NVAETFRSAF 60
AQRLKRHEDV TVLDSLTGAI VPVPEEQDPD PDPVSYPSQS LKPRKPQERS SELVRITDVG 120
PEGERQFREV VRKTRMIYDS LRIFLILEET REVLGRRRGR PDSKAASMMK ERFLWLNRDK 180
RIVGSIPGVQ VGDIFFFRLE LCVMGLHGQT QAGIDYLIGS RSSNGEPIAT SVIVSGGYED 240
DDDQGDVIIY TGHGGQDKLG RQAEHQKLEG GNLAMERSMY YGIEVRVVRG FKYENAVSSK 300
VYVYDGLFRI VDSWFDVGKS GFGVFKFRLE RIGGQVEMGT SVLKFAKTLK TNPLSVRPSG 360
YISFDISNRK ENAPVYLFND VDDDQEPLYY EYLATTSFPR GILGGSNGDN ASGCECVSGC 420
SSGCICERKN GGEFAYDYNG NLIRMRPLVH ECGPGCKCPP TCRNRVTQKG LRSRLEVFRS 480
VETGWGVRCL DILHAGAFIC EYVGVALTRE QANILTMNGD TLVYPARFCS DRWKDWGDLS 540
QVFPDYERPS YRQIPPVDYA MDVSKLRNVA CYISHSNDSN VIVQMVLHDH NNLMFPRVML 600
FAAENIPPMT ELSLDYGVSD DEWSPKLAIC N 631
Nucleotide Sequence
(Fasta)		ATGACTTCTC ACATACCTAT GGTGATCCCT AAGCCGGAGC CAGTCACTGA TTCCTCCCCA 60
CAAACTCCGA TTCCACCCTC ATCCTTCTTC AATTTCAACA CCACCACCAC CCAATCTCCC 120
CTCGAACCTA ACTTGTACAC CGAGTTCACC AACGTCGCCG AGACTTTCCG CTCCGCCTTC 180
GCACAGCGCC TCAAACGCCA CGAGGACGTC ACGGTCCTCG ATTCCCTAAC CGGCGCCATC 240
GTACCCGTTC CCGAGGAGCA AGATCCGGAT CCGGATCCGG TCAGTTACCC TTCGCAGTCC 300
CTCAAGCCGC GTAAACCTCA GGAGCGCTCG TCTGAGCTCG TGAGGATCAC CGACGTCGGC 360
CCCGAGGGAG AGAGGCAGTT TCGGGAAGTG GTGAGGAAGA CGAGGATGAT CTACGATTCT 420
CTCCGGATCT TCTTGATCCT CGAGGAGACT CGTGAAGTGC TCGGAAGGAG GAGAGGCAGG 480
CCCGATAGCA AAGCCGCCTC GATGATGAAA GAGCGTTTCC TTTGGCTTAA TCGGGACAAA 540
CGCATCGTCG GTTCGATCCC CGGCGTCCAG GTCGGAGACA TCTTCTTCTT CAGGCTCGAG 600
CTCTGCGTCA TGGGGTTGCA CGGACAGACG CAGGCTGGGA TTGACTATCT CATTGGCTCC 660
CGCAGCTCTA ACGGAGAGCC GATCGCCACC AGCGTGATTG TCTCAGGTGG TTATGAGGAT 720
GATGATGATC AAGGGGATGT GATTATCTAC ACGGGACATG GAGGGCAGGA CAAGCTCGGG 780
AGGCAGGCTG AGCATCAGAA GCTCGAAGGT GGGAATCTCG CTATGGAGAG GAGTATGTAC 840
TACGGGATTG AAGTGAGAGT GGTTAGAGGT TTTAAGTACG AGAACGCTGT TTCTAGCAAG 900
GTTTATGTTT ATGATGGGCT GTTTAGGATC GTTGATTCTT GGTTCGATGT GGGGAAGTCC 960
GGGTTCGGTG TTTTTAAATT TAGGCTGGAG AGGATCGGAG GGCAGGTGGA GATGGGGACG 1020
TCGGTGTTGA AGTTCGCCAA GACGCTTAAA ACCAACCCTT TGTCTGTGAG ACCGAGCGGG 1080
TACATCAGCT TCGATATCTC CAACAGGAAG GAGAACGCTC CTGTGTATTT GTTCAACGAC 1140
GTTGATGACG ATCAGGAGCC GTTGTACTAT GAGTATCTCG CCACTACTTC TTTCCCTCGC 1200
GGCATATTGG GTGGTAGTAA TGGTGATAAT GCGAGTGGAT GCGAATGTGT CAGCGGTTGT 1260
AGCAGCGGCT GCATCTGCGA GAGGAAGAAC GGTGGCGAGT TTGCTTATGA TTACAACGGG 1320
AATTTGATAA GAATGAGGCC GTTGGTGCAT GAGTGTGGAC CGGGGTGTAA GTGCCCTCCG 1380
ACGTGTCGGA ACCGCGTGAC GCAGAAGGGG TTGAGGAGTA GACTCGAGGT GTTTAGGTCG 1440
GTGGAGACTG GCTGGGGGGT TCGGTGTTTG GATATATTGC ACGCTGGCGC TTTTATTTGC 1500
GAGTATGTTG GGGTTGCTTT GACGAGGGAG CAAGCCAACA TTCTGACAAT GAACGGCGAT 1560
ACTTTGGTGT ACCCTGCTCG GTTTTGTTCT GATAGGTGGA AAGATTGGGG AGATTTGTCT 1620
CAGGTGTTTC CGGATTACGA GCGGCCTTCG TATCGTCAGA TCCCTCCTGT TGATTATGCG 1680
ATGGATGTTT CAAAGTTGAG GAACGTTGCT TGTTACATAA GCCACAGTAA TGATTCGAAT 1740
GTGATTGTAC AGATGGTACT GCATGATCAC AACAATCTGA TGTTCCCTCG TGTTATGCTT 1800
TTCGCTGCTG AGAACATTCC GCCCATGACT GAGCTCAGCC TTGATTATGG AGTCTCTGAT 1860
GATGAATGGA GCCCCAAGCT CGCCATTTGT AATTAA 1897
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0154 Bo8g083410.1 Brassica oleracea 97 0.0 1165
WERAM-Arl-0041 fgenesh1_pm.C_scaffold_9000002 Arabidopsis lyrata 76 0.0 966
WERAM-Art-0099 AT4G13460.2 Arabidopsis thaliana 74 0.0 923
WERAM-Prp-0044 EMJ28171 Prunus persica 65 0.0 786
WERAM-Pot-0114 POPTR_0010s07480.1 Populus trichocarpa 67 0.0 785
WERAM-Thc-0056 EOY06233 Theobroma cacao 65 0.0 781
WERAM-Viv-0026 VIT_05s0049g02220.t01 Vitis vinifera 63 0.0 751
WERAM-Sol-0118 Solyc09g090810.1.1 Solanum lycopersicum 60 0.0 724
WERAM-Sot-0005 PGSC0003DMT400003956 Solanum tuberosum 59 0.0 719
WERAM-Glm-0079 GLYMA07G19420.1 Glycine max 58 0.0 697
WERAM-Met-0016 KEH40794 Medicago truncatula 63 0.0 664
WERAM-Brd-0015 BRADI1G29010.1 Brachypodium distachyon 56 1e-174 610
WERAM-Ori-0084 BGIOSGA025596-PA Oryza indica 56 7e-174 608
WERAM-Orb-0074 OBART07G12290.1 Oryza barthii 56 7e-174 608
WERAM-Ors-0067 OS07T0435900-01 Oryza sativa 55 2e-173 606
WERAM-Orm-0070 OMERI07G09810.1 Oryza meridionalis 56 7e-173 604
WERAM-Orr-0076 ORUFI07G12410.1 Oryza rufipogon 56 2e-172 603
WERAM-Orgl-0071 OGLUM07G11790.1 Oryza glumaepatula 56 2e-172 603
WERAM-Lep-0075 LPERR07G10390.1 Leersia perrieri 56 4e-172 602
WERAM-Orp-0072 OPUNC07G10970.1 Oryza punctata 55 6e-172 601
WERAM-Tra-0067 Traes_2BS_069C173B6.2 Triticum aestivum 54 7e-171 598
WERAM-Tru-0091 TRIUR3_32787-P1 Triticum urartu 55 3e-169 592
WERAM-Hov-0102 MLOC_71915.1 Hordeum vulgare 54 4e-169 592
WERAM-Sob-0021 Sb02g010210.1 Sorghum bicolor 55 1e-168 590
WERAM-Sei-0110 Si029125m Setaria italica 55 4e-167 585
WERAM-Zem-0024 GRMZM2G034288_P01 Zea mays 54 4e-165 579
WERAM-Orbr-0083 OB07G18500.1 Oryza brachyantha 59 2e-161 566
WERAM-Orl-0087 KN539973.1_FGP004 Oryza longistaminata 59 3e-159 559
WERAM-Mua-0084 GSMUA_Achr5P13120_001 Musa acuminata 53 5e-159 558
WERAM-Amt-0043 ERN15731 Amborella trichopoda 52 2e-148 523
WERAM-Org-0094 ORGLA08G0193900.1 Oryza glaberrima 47 2e-122 437
WERAM-Orni-0096 ONIVA09G01180.1 Oryza nivara 47 3e-122 436
WERAM-Aet-0002 EMT31327 Aegilops tauschii 38 1e-90 332
WERAM-Php-0129 PP1S9_150V6.1 Physcomitrella patens 40 9e-90 328
WERAM-Sem-0004 EFJ22703 Selaginella moellendorffii 38 1e-86 318
Created Date 25-Jun-2016