WERAM Information

Tag Content
WERAM ID WERAM-Bro-0154
Ensembl Protein ID Bo8g083410.1
Gene Name SDG22
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo8g083410 Bo8g083410.1 Bo8g083410.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT SUV39 1.00e-33 118 477 620
Organism Brassica oleracea
Domain Profile
  HMT SUV39
     SUV39.txt   2 rLqvfktenkGwGvrclddiakgsFvciyaGeiltddeaekegleegdeyladldskesvenlkegyesdvplssdssntrqekdkeeseyiidakk 98 
                   rL+vf++ ++GwGvrcld +++g+F+c+y+G  lt+++a+   +++gd+ ++  +  ++ ++   +  + +p    + ++ ++ +    +y +d +k
  Bo8g083410.1 477 RLEVFRSVETGWGVRCLDILHAGAFICEYVGVALTREQANIL-TMNGDTLVYPARFCSDRWKDWGDLSQVFP----DYERPSYPQIPPVDYAMDVSK 568
                   8**************************************998.88999999999998888777777777775....4788899999*********** PP
     SUV39.txt  99 egnvgrflnHscspNlfvqnvfvdthdlrfprvafFaskrikagtELtwdYg 150
                     nv+++++Hs + N++vq v++d+++l+fprv++Fa+++i+++tEL+ dYg
  Bo8g083410.1 569 LRNVACYISHSNDSNVIVQLVLHDHNNLMFPRVMLFAAENIPPMTELSLDYG 620
                   ***************************************************6 PP
Protein Sequence
(Fasta)		MTSHIPMVIP KPEPVTDSSP QTPIPPSSVF NFNTTTTQSP LDPNLYTEFN NVAETFRSAF 60
AQRLKRHEDV TVLDSLTGAI VPVPEEQDPD PDPVSYPSQS LKPRKPQERS SELVRITDVG 120
PEGERQFREV VRKTRMIYDS LRIFLILEET REELVRRRGR PDSKAASMMK ERFLWLNRDK 180
RIVGSIPGVQ VGDIFFFRLE LCVMGLHGQT QAGIDYLIGS RSSNGEPIAT SVIVSGGYED 240
DDDQGDVIIY TGHGGQDKLG RQAEHQKLEG GNLAMERSMY YGIEVRVVRG FKYENSVSSK 300
VYVYDGLFRI VDSWFDVGKS GFGVFKFRLE RIGGQVEMGT SVLKFAKTLK TNPLSVRPSG 360
YISFDISNRK ENAPVYLFND VDDDQEPLYY EYLATTSFPR GILSSSSSGG GDNASGCGCV 420
NGCGSGCICE RKNGGEFAYD YNGNLIRMRP LVHECGPGCK CPPTCRNRVT QKGLRSRLEV 480
FRSVETGWGV RCLDILHAGA FICEYVGVAL TREQANILTM NGDTLVYPAR FCSDRWKDWG 540
DLSQVFPDYE RPSYPQIPPV DYAMDVSKLR NVACYISHSN DSNVIVQLVL HDHNNLMFPR 600
VMLFAAENIP PMTELSLDYG VSDDEWSPKL AICN 634
Nucleotide Sequence
(Fasta)		ATGACTTCTC ACATACCTAT GGTGATCCCT AAGCCGGAGC CAGTCACTGA TTCCTCCCCA 60
CAAACTCCGA TTCCACCCTC ATCCGTCTTC AATTTCAACA CCACCACCAC CCAATCTCCC 120
CTCGACCCTA ACTTGTACAC GGAGTTCAAC AACGTCGCCG AGACTTTCCG CTCCGCCTTC 180
GCACAGCGCC TCAAACGCCA CGAGGACGTC ACGGTTCTCG ATTCCCTAAC CGGCGCCATC 240
GTACCGGTTC CCGAGGAGCA AGATCCGGAT CCGGATCCGG TCAGTTACCC TTCGCAGTCC 300
CTCAAGCCGC GTAAGCCTCA GGAGCGCTCG TCTGAGCTCG TGAGGATCAC CGACGTCGGC 360
CCCGAGGGAG AGAGGCAGTT CCGGGAAGTC GTGAGGAAGA CGAGGATGAT CTACGACTCC 420
CTCCGGATCT TCTTGATCCT CGAGGAGACG CGCGAAGAGC TCGTAAGGAG GAGAGGCAGG 480
CCCGATAGCA AAGCCGCGTC GATGATGAAA GAGCGTTTCC TTTGGCTCAA CCGCGACAAA 540
CGCATCGTCG GTTCGATCCC CGGCGTCCAG GTCGGAGACA TCTTCTTCTT CAGGCTCGAG 600
CTCTGCGTCA TGGGATTGCA CGGACAGACG CAGGCCGGGA TTGACTATCT CATTGGCTCC 660
CGCAGCTCCA ACGGAGAGCC GATCGCCACC AGCGTGATTG TCTCAGGTGG TTATGAGGAT 720
GATGATGATC AAGGGGATGT GATTATCTAC ACGGGACACG GAGGGCAGGA CAAGCTCGGG 780
AGGCAAGCTG AGCATCAGAA GCTGGAAGGT GGGAACCTCG CTATGGAGAG GAGTATGTAC 840
TACGGGATCG AAGTGAGAGT CGTTAGAGGT TTTAAGTACG AGAACTCTGT TTCTAGCAAA 900
GTTTATGTTT ATGATGGTTT GTTTAGGATC GTTGATTCTT GGTTCGATGT GGGGAAGTCT 960
GGGTTCGGTG TTTTTAAATT TAGGCTGGAG AGGATCGGAG GACAGGTGGA GATGGGGACG 1020
TCGGTGTTGA AGTTCGCCAA GACGCTTAAA ACCAACCCTT TGTCTGTGAG ACCGAGCGGT 1080
TACATCAGCT TCGATATCTC CAACAGGAAG GAGAACGCTC CTGTGTATCT GTTCAACGAC 1140
GTTGATGACG ACCAGGAGCC GTTGTACTAC GAGTATCTCG CCACTACTTC TTTCCCTCGC 1200
GGCATATTGA GTAGTAGTAG TAGTGGTGGT GGTGATAACG CGAGTGGGTG CGGCTGTGTC 1260
AACGGCTGTG GCAGCGGCTG CATCTGCGAG AGGAAGAACG GAGGCGAGTT TGCTTATGAT 1320
TACAACGGGA ATTTGATAAG AATGAGGCCG TTGGTGCATG AGTGTGGACC TGGGTGTAAG 1380
TGCCCTCCGA CGTGTCGGAA CCGCGTGACT CAGAAGGGGT TGAGGAGTAG ACTCGAGGTG 1440
TTTAGGTCGG TGGAGACTGG CTGGGGGGTT CGGTGTTTGG ATATATTGCA CGCCGGCGCT 1500
TTTATCTGCG AGTACGTCGG GGTTGCTTTG ACGAGGGAGC AAGCCAACAT TCTGACAATG 1560
AACGGCGATA CTTTGGTGTA CCCTGCTCGG TTTTGTTCTG ATAGGTGGAA AGATTGGGGA 1620
GATTTGTCTC AGGTGTTTCC TGATTACGAG CGGCCTTCGT ATCCTCAGAT CCCTCCGGTT 1680
GATTACGCGA TGGATGTTTC TAAGCTGAGG AATGTTGCTT GTTACATAAG CCACAGCAAT 1740
GATTCGAATG TGATTGTACA GTTAGTACTG CATGATCACA ACAATCTGAT GTTCCCTCGT 1800
GTTATGCTTT TCGCTGCTGA GAACATTCCT CCCATGACTG AGCTCAGCCT TGATTATGGA 1860
GTCTCTGATG ATGAATGGAG CCCCAAGCTC GCCATTTGTA ATTAA 1906
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0035 Bra007048.1-P Brassica rapa 96 0.0 1142
WERAM-Arl-0041 fgenesh1_pm.C_scaffold_9000002 Arabidopsis lyrata 77 0.0 934
WERAM-Art-0099 AT4G13460.2 Arabidopsis thaliana 72 0.0 892
WERAM-Prp-0044 EMJ28171 Prunus persica 62 0.0 763
WERAM-Thc-0056 EOY06233 Theobroma cacao 60 0.0 756
WERAM-Pot-0114 POPTR_0010s07480.1 Populus trichocarpa 63 0.0 755
WERAM-Viv-0026 VIT_05s0049g02220.t01 Vitis vinifera 58 0.0 729
WERAM-Sol-0118 Solyc09g090810.1.1 Solanum lycopersicum 56 0.0 713
WERAM-Sot-0005 PGSC0003DMT400003956 Solanum tuberosum 55 0.0 706
WERAM-Glm-0079 GLYMA07G19420.1 Glycine max 56 0.0 674
WERAM-Met-0016 KEH40794 Medicago truncatula 61 0.0 639
WERAM-Brd-0015 BRADI1G29010.1 Brachypodium distachyon 54 6e-165 578
WERAM-Ori-0084 BGIOSGA025596-PA Oryza indica 53 2e-164 577
WERAM-Orb-0074 OBART07G12290.1 Oryza barthii 53 2e-164 576
WERAM-Ors-0067 OS07T0435900-01 Oryza sativa 53 7e-164 575
WERAM-Orm-0070 OMERI07G09810.1 Oryza meridionalis 53 1e-163 574
WERAM-Sob-0021 Sb02g010210.1 Sorghum bicolor 55 2e-163 573
WERAM-Orr-0076 ORUFI07G12410.1 Oryza rufipogon 53 3e-163 572
WERAM-Orgl-0071 OGLUM07G11790.1 Oryza glumaepatula 53 3e-163 572
WERAM-Lep-0075 LPERR07G10390.1 Leersia perrieri 53 8e-163 571
WERAM-Orp-0072 OPUNC07G10970.1 Oryza punctata 53 4e-162 568
WERAM-Tra-0067 Traes_2BS_069C173B6.2 Triticum aestivum 52 3e-161 565
WERAM-Sei-0110 Si029125m Setaria italica 53 7e-161 565
WERAM-Zem-0021 GRMZM2G025924_P01 Zea mays 54 3e-160 563
WERAM-Tru-0091 TRIUR3_32787-P1 Triticum urartu 53 5e-160 561
WERAM-Hov-0102 MLOC_71915.1 Hordeum vulgare 52 2e-159 560
WERAM-Orbr-0083 OB07G18500.1 Oryza brachyantha 57 1e-155 547
WERAM-Orl-0087 KN539973.1_FGP004 Oryza longistaminata 58 6e-155 545
WERAM-Mua-0084 GSMUA_Achr5P13120_001 Musa acuminata 51 2e-149 527
WERAM-Amt-0043 ERN15731 Amborella trichopoda 51 2e-140 497
WERAM-Org-0094 ORGLA08G0193900.1 Oryza glaberrima 47 5e-119 426
WERAM-Orni-0096 ONIVA09G01180.1 Oryza nivara 47 8e-119 425
WERAM-Php-0129 PP1S9_150V6.1 Physcomitrella patens 41 7e-84 308
WERAM-Aet-0062 EMT00374 Aegilops tauschii 36 9e-84 308
WERAM-Sem-0004 EFJ22703 Selaginella moellendorffii 40 5e-81 299
Created Date 25-Jun-2016