| Tag |
Content |
| WERAM ID |
WERAM-Tra-0298 |
| Ensembl Protein ID |
Traes_7AS_BD4F67471.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
1.00e-25 |
93.3 |
40 |
332 |
| Ac_Reader |
Bromodomain |
1.50e-17 |
65.6 |
1014 |
1078 |
|
| Organism |
Triticum aestivum |
| Domain Profile |
HDAC Class-I
class-1.txt 3 vayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvge 90
v y d++ + +++ hp +++ + ++++ g +k ++v+p +as+e+ll +h+e+y++ l+++ + e+ +
Traes_7DL_86EEFA04E.2 40 VIYSTAYDIAFLGIEKMHPFDSSKWGRICRFLTKEGHLEKTRVVEPLEASKEDLLVVHTEAYLNSLRSSFRVA---AIVEVPPLTLMP 124
56777788888889999***********9************************************99765433...333455666666 PP
class-1.txt 91 dcPvfdg.lfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlail.ellk.khkrvlyididlhhGDgv 175
+ v + l+ + + ++G+ l+a L+ + ain GG+hh +e Gfc Di l+i+ + + +rv+ id+d h G+g
Traes_7DL_86EEFA04E.2 125 NWLVQQRlLYPFRKQVGGSILSAKLALE---RGWAINVGGGFHHCSAEEGGGFCAYADISLSIQfAFVRlDISRVMIIDLDAHQGNGH 209
6666665168888877777777766665...4579****************************834455589**************** PP
class-1.txt 176 eeafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDr 263
e+ f + rv + + y+ + +P + +y v l g + + y + + ++ +f+P+ ++ + G+D l gD+
Traes_7DL_86EEFA04E.2 210 EKDFANDGRVYILDM--YNAGIYP-------FDHAAKRYIDQKVELVSGTETDDYLDQLDKALKVAQTRFQPQLIIYNAGTDILDGDP 288
**********98765..6665566.......445566888899********9999999999*************************** PP
class-1.txt 264 lgefnlsikgh....aecvkfvksfnlpllvl.GGGGYtlrnvaR 303
lg+ ++s +g ++ +f k+ n+pl+++ GGY + aR
Traes_7DL_86EEFA04E.2 289 LGNLKISPEGVvirdEKVFRFAKDQNIPLVMMtSAGGYMKS-SAR 332
*********9733324699*********8655167888654.455 PP
Ac_Reader Bromodomain
BROMO.txt 4 evsepFrepvdpqleipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenks 69
+s F +pv + + +pdYyd+i++PmdL ti+ + ++ +Y++ ef +Dv +i +Na yne +
Traes_7DL_8317D3365.2 1014 AISLLFLKPVTK-KVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHIYNETRH 1078
67999*******.7************************************************9876 PP
|
Protein Sequence
(Fasta) | MKTCSDVFHY MSYIENSSAS GTLSRGDSLV KGYIKGHELR VRSRFIRRRG RVRRLKYTWK 60
SAGYHFIRKR ITERKDQPCR QYNPCGCQSS CGKQCPCLVN GTCCEKYCGC PKMCKNRFRG 120
CHCAKSQCRS RQCPCFAADR ECDPDVCRNC WVGCGDGSLG VPNQRGDNYE CRNMKLLLKQ 180
QQRVLLGRSD VSGWGAFLKN TVSKHEYLGE YTGELISHKE ADKRGKIYDR ENSSFLFNLN 240
NEFVLDAFRM GDKLKFANHS PDPNCYAKVI MVAGDHRVGI FAKERIGSGE EIFYDYRYEP 300
DRAPVWARKP DAPGAKDPGQ PSSGRAKKLA H 331Protein Fasta Sequence
>Traes_7AS_BD4F67471.1|Bromodomain|Triticum aestivum
MKTCSDVFHYMSYIENSSASGTLSRGDSLVKGYIKGHELRVRSRFIRRRGRVRRLKYTWKSAGYHFIRKRITERKDQPCRQYNPCGCQSSCGKQCPCLVNGTCCEKYCGCPKMCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVGCGDGSLGVPNQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNTVSKHEYLGEYTGELISHKEADKRGKIYDRENSSFLFNLNNEFVLDAFRMGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERIGSGEEIFYDYRYEPDRAPVWARKPDAPGAKDPGQPSSGRAKKLAH |
Nucleotide Sequence
(Fasta) | CAGTTGTTTA ATTGCTCGGA ACCTTCTCTG TGGAATGAAA ACATGCAGCG ATGTTTTTCA 60
TTATATGAGT TATATTGAAA ACAGCAGCGC ATCTGGAACT CTTAGCAGGG GTGATTCCCT 120
CGTCAAAGGA TATATAAAGG GACATGAGTT GCGCGTGAGA TCACGATTTA TTAGAAGGCG 180
AGGTAGAGTT CGTCGTTTGA AGTACACCTG GAAATCTGCA GGTTACCATT TTATAAGGAA 240
AAGGATTACA GAAAGGAAAG ATCAGCCTTG TCGGCAATAT AATCCATGTG GTTGTCAATC 300
ATCATGTGGG AAACAGTGTC CATGTCTCGT AAATGGGACA TGCTGTGAGA AATACTGTGG 360
GTGTCCGAAA ATGTGCAAGA ACCGTTTTCG AGGTTGTCAT TGTGCTAAGA GCCAGTGTCG 420
CAGTCGCCAG TGTCCATGCT TTGCTGCTGA CAGGGAATGT GATCCTGACG TGTGCAGAAA 480
CTGCTGGGTC GGGTGTGGTG ATGGTTCACT GGGAGTTCCT AACCAAAGAG GTGATAATTA 540
TGAATGCCGG AACATGAAGC TACTTCTTAA ACAACAACAA AGGGTCTTGC TTGGGAGATC 600
TGATGTTTCT GGCTGGGGAG CATTTCTCAA GAATACTGTT AGCAAGCATG AGTATCTTGG 660
CGAGTACACT GGGGAGCTTA TCTCTCACAA GGAAGCAGAC AAGCGTGGGA AGATATATGA 720
CCGTGAGAAT TCGTCGTTCC TGTTCAACCT GAATAATGAG TTTGTTCTGG ATGCCTTCAG 780
AATGGGCGAC AAGCTGAAGT TTGCCAACCA CTCCCCTGAC CCGAATTGCT ATGCCAAGGT 840
CATCATGGTA GCAGGCGATC ACAGGGTAGG CATATTTGCC AAAGAGCGGA TCGGTTCAGG 900
CGAGGAGATC TTCTATGATT ACCGCTACGA GCCTGACCGA GCCCCCGTGT GGGCTCGAAA 960
GCCCGACGCT CCTGGAGCGA AAGACCCCGG GCAGCCTTCC AGCGGGCGGG CCAAGAAGCT 1020
CGCCCACTGA AGAGACATCC ATCATTGGTT GATTCTTTTG TTCAGGGCCA GAATTGGGTA 1080
GTTGTTAGCA TGCTGTTGTA CCTTAACCTG ACATTCATTC CTTGGCCCAC TGTTGTAGTG 1140
TCAGAAGTTG AGAACCCCAT TTGTGTCGGA ACCTGTGGAT GGAACGTGAA CGGTTTTTTA 1200
ACCGCTATAT GGTTGCTCCA TGCCCAATGC AGCTGGGCTG CCTTTGGTGG TGTGTTTGCC 1260
CTCTCAAAAG TTCTTGTATG TGTGTTTGTT TGATGTAGC
Nucleotide Fasta Sequence
>Traes_7AS_BD4F67471.1|Bromodomain|Triticum aestivum
CAGTTGTTTAATTGCTCGGAACCTTCTCTGTGGAATGAAAACATGCAGCGATGTTTTTCATTATATGAGTTATATTGAAAACAGCAGCGCATCTGGAACTCTTAGCAGGGGTGATTCCCTCGTCAAAGGATATATAAAGGGACATGAGTTGCGCGTGAGATCACGATTTATTAGAAGGCGAGGTAGAGTTCGTCGTTTGAAGTACACCTGGAAATCTGCAGGTTACCATTTTATAAGGAAAAGGATTACAGAAAGGAAAGATCAGCCTTGTCGGCAATATAATCCATGTGGTTGTCAATCATCATGTGGGAAACAGTGTCCATGTCTCGTAAATGGGACATGCTGTGAGAAATACTGTGGGTGTCCGAAAATGTGCAAGAACCGTTTTCGAGGTTGTCATTGTGCTAAGAGCCAGTGTCGCAGTCGCCAGTGTCCATGCTTTGCTGCTGACAGGGAATGTGATCCTGACGTGTGCAGAAACTGCTGGGTCGGGTGTGGTGATGGTTCACTGGGAGTTCCTAACCAAAGAGGTGATAATTATGAATGCCGGAACATGAAGCTACTTCTTAAACAACAACAAAGGGTCTTGCTTGGGAGATCTGATGTTTCTGGCTGGGGAGCATTTCTCAAGAATACTGTTAGCAAGCATGAGTATCTTGGCGAGTACACTGGGGAGCTTATCTCTCACAAGGAAGCAGACAAGCGTGGGAAGATATATGACCGTGAGAATTCGTCGTTCCTGTTCAACCTGAATAATGAGTTTGTTCTGGATGCCTTCAGAATGGGCGACAAGCTGAAGTTTGCCAACCACTCCCCTGACCCGAATTGCTATGCCAAGGTCATCATGGTAGCAGGCGATCACAGGGTAGGCATATTTGCCAAAGAGCGGATCGGTTCAGGCGAGGAGATCTTCTATGATTACCGCTACGAGCCTGACCGAGCCCCCGTGTGGGCTCGAAAGCCCGACGCTCCTGGAGCGAAAGACCCCGGGCAGCCTTCCAGCGGGCGGGCCAAGAAGCTCGCCCACTGAAGAGACATCCATCATTGGTTGATTCTTTTGTTCAGGGCCAGAATTGGGTAGTTGTTAGCATGCTGTTGTACCTTAACCTGACATTCATTCCTTGGCCCACTGTTGTAGTGTCAGAAGTTGAGAACCCCATTTGTGTCGGAACCTGTGGATGGAACGTGAACGGTTTTTTAACCGCTATATGGTTGCTCCATGCCCAATGCAGCTGGGCTGCCTTTGGTGGTGTGTTTGCCCTCTCAAAAGTTCTTGTATGTGTGTTTGTTTGATGTAGC
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
