WERAM Information

Tag Content
WERAM ID WERAM-Brr-0159
Ensembl Protein ID Bra032169.1-P
Gene Name CLF
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra032169 Bra032169.1 Bra032169.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT EZ 3.80e-58 195.6 759 872
HMT SET1 9.80e-28 97.6 761 872
Organism Brassica rapa
Domain Profile
  HMT EZ
         EZ.txt   1 krillgksdvaGwGlflkesvekneylgeytGelisddeadkrGkiydrakssflfnlndqlvidakrkGnklkfanhsakpncyakvllvaGdhr 96 
                    +r+llg+sdv+GwG+flk+sv+k+eylgeytGelis++eadkrGkiydr++ssflfnlndq    a+rkG+klkfanhs +pncyakv++vaGdhr
  Bra032169.1-P 759 QRVLLGISDVSGWGAFLKNSVSKHEYLGEYTGELISHKEADKRGKIYDRENSSFLFNLNDQA--HAYRKGDKLKFANHSPEPNCYAKVIMVAGDHR 852
                    79**********************************************************97..69****************************** PP
         EZ.txt  97 iGlfakrrieaseelffdyr 116
                    +G+fak+ri a+eelf+dyr
  Bra032169.1-P 853 VGIFAKERILAGEELFYDYR 872
                    *******************7 PP
  HMT SET1
       SET1.txt   3 levakskikglglvakkeiekeelviEYvGevirsevadkrekeyekkeigvylfrldedaevvvdatkkgniarfinhscepNceakvvavdgek 98 
                    + +  s++ g+g + k++++k+e + EY+Ge+i++++adkr k y+++++ ++lf+l+++      a +kg++ +f nhs+epNc+akv++v g++
  Bra032169.1-P 761 VLLGISDVSGWGAFLKNSVSKHEYLGEYTGELISHKEADKRGKIYDRENS-SFLFNLNDQ----AHAYRKGDKLKFANHSPEPNCYAKVIMVAGDH 851
                    677899****************************************9955.6*******9....78****************************** PP
       SET1.txt  99 kiviyakraIekgeeltydYk 119
                    +++i+ak +I +geel+ydY+
  Bra032169.1-P 852 RVGIFAKERILAGEELFYDYR 872
                    ********************6 PP
Protein Sequence
(Fasta)		MASGASPSSS ATRSDPHKHS TTSQAEKRAP ASKEVSAVID SLKKKLAADR CISIKRRIDE 60
NKKNVRGITQ STMRSCMERG GGSYKDGSDL LVKRQRDSPG MKSGVNASDA DKSNNHSSFL 120
EDGNASSTTM VQGSSVPVKI SLRPIKMPDV KRLSPYTTWV FLDRNQRMTE DQSVVGRRRI 180
YYDQTGGEAL ICSDSEEEAI DEEDEKRAFL EPEDFIIRMT LDQLGLSDSV LEELANFLSR 240
SSSEIKARYE VLMKEKEVSE SGDNQAESSL LNKDMDGALD SFDNLFCRRC LVFDCRLHGC 300
SQDLIFPAEK PAPWTPPVDE NLTCGANCYK TLLKSNRIPA NGTTEDKTGT SSDGAGTKTT 360
SKFSGKLNRK KTKTFPSESA SSNEKCTPET SDSENGVQQD TNPEKVSSTS KVKASGRRGG 420
RKRNNNRVAE RVSRRTQKRQ KKSEASDTDS IATGSRSASD AKHKDNEDAT SSSQKHVKSG 480
SSKNSRKNDT PVDDSKNSVK GDDPVSQLNA VASEPCSDGS LRKEEFVGEN VCPGGLSEDK 540
SWRPLEKSLF QKGVEIFGMN SCMIARNLLC GLKSCWEVFQ YMTCSENKAS FFGGDALNPD 600
GSSKFDINGN MTNNQVRRRS RFLRRRGKVR RLKYTWKSAA YHSIRKRSTD KKDQPCRQFN 660
PCNCKTACGK ECTCLLNGTC CEKYCGCPKS CKNRFRGCHC AKSQCRSRQC PCFAADRECD 720
PDVCRNCWVI GGDGTLGVPS QRGDNYECRN MKLLLKQQQR VLLGISDVSG WGAFLKNSVS 780
KHEYLGEYTG ELISHKEADK RGKIYDRENS SFLFNLNDQA HAYRKGDKLK FANHSPEPNC 840
YAKVIMVAGD HRVGIFAKER ILAGEELFYD YRYEPDRAPA WARKPEASGS KKDENVTPSV 900
GRPKKVA 907
Nucleotide Sequence
(Fasta)		ATGGCGTCGG GAGCTTCGCC TTCTTCTTCC GCCACCAGAT CGGACCCGCA CAAGCACTCT 60
ACGACATCTC AGGCGGAGAA GAGAGCTCCA GCGTCTAAGG AAGTTTCAGC AGTGATAGAT 120
TCGCTTAAGA AGAAGCTCGC AGCTGATCGG TGTATCTCAA TTAAGAGAAG GATTGATGAG 180
AACAAGAAGA ATGTGCGTGG CATCACTCAA TCCACTATGA GGTCGTGTAT GGAGAGAGGA 240
GGCGGTAGCT ATAAAGACGG TAGCGATCTC TTGGTTAAGA GGCAAAGAGA TTCGCCTGGT 300
ATGAAAAGCG GAGTCAATGC GAGTGATGCT GATAAGAGCA ACAACCATAG CAGCTTCTTA 360
GAAGATGGGA ATGCTAGTTC AACAACCATG GTTCAAGGGT CTAGTGTCCC TGTTAAGATT 420
TCCTTGCGGC CGATCAAAAT GCCTGATGTT AAACGTTTGT CGCCTTATAC CACATGGGTT 480
TTTCTGGATA GGAATCAAAG AATGACTGAA GACCAGTCTG TTGTGGGTCG GAGGAGAATC 540
TATTATGACC AAACCGGCGG GGAAGCACTC ATTTGCAGTG ATAGTGAAGA GGAGGCTATT 600
GACGAGGAAG ATGAAAAAAG AGCTTTTCTG GAGCCTGAAG ATTTTATTAT TCGCATGACC 660
CTTGACCAAC TAGGTCTTTC AGACTCTGTC TTGGAGGAAC TAGCAAATTT CTTGTCCAGA 720
AGCTCTAGTG AAATAAAGGC AAGATATGAA GTGCTTATGA AGGAAAAAGA AGTTTCAGAG 780
AGTGGCGATA ATCAAGCAGA GAGTTCTCTT CTTAACAAAG ATATGGATGG AGCTTTGGAT 840
TCTTTCGACA ACCTGTTCTG CCGTCGATGC CTTGTGTTTG ATTGCCGGCT GCACGGGTGT 900
TCGCAGGATC TTATATTTCC TGCTGAGAAA CCAGCTCCAT GGACTCCTCC TGTGGATGAA 960
AATCTAACCT GTGGCGCTAA CTGCTATAAA ACGCTTCTCA AATCTAATAG AATCCCAGCT 1020
AATGGCACCA CCGAAGATAA AACTGGCACT TCATCAGATG GTGCGGGTAC TAAAACCACA 1080
TCCAAGTTCT CCGGCAAACT TAATAGGAAA AAAACAAAAA CCTTCCCTAG CGAAAGCGCG 1140
TCGTCTAATG AAAAATGCAC GCCAGAAACA AGTGACTCAG AGAACGGCGT TCAGCAGGAT 1200
ACCAATCCTG AGAAAGTTTC ATCGACATCA AAGGTGAAAG CTAGTGGGAG ACGTGGAGGT 1260
CGTAAGAGGA ACAACAACCG AGTTGCTGAG CGAGTTTCTC GTAGGACTCA AAAGAGGCAA 1320
AAGAAGTCAG AAGCTTCCGA TACTGATTCC ATCGCCACTG GGAGTCGTTC AGCAAGCGAT 1380
GCAAAACATA AAGATAATGA AGATGCTACA TCCTCTTCTC AGAAGCATGT AAAATCTGGG 1440
AGCTCTAAGA ATTCAAGAAA GAATGACACT CCTGTAGATG ACTCCAAGAA TTCTGTGAAG 1500
GGTGACGATC CTGTTTCTCA GTTAAATGCT GTTGCATCTG AACCGTGTAG CGATGGAAGT 1560
TTAAGGAAAG AAGAGTTTGT GGGTGAAAAT GTATGTCCAG GAGGACTGTC TGAAGATAAA 1620
TCGTGGAGAC CACTTGAGAA AAGCCTGTTC CAAAAAGGTG TTGAGATTTT TGGAATGAAT 1680
AGCTGCATGA TTGCTAGGAA CCTTCTGTGT GGTCTCAAGT CGTGTTGGGA GGTCTTCCAA 1740
TACATGACTT GCTCGGAGAA CAAAGCTTCC TTCTTCGGAG GTGATGCATT GAATCCCGAC 1800
GGCTCTTCCA AGTTTGATAT CAATGGAAAT ATGACTAATA ACCAAGTGCG AAGAAGGTCA 1860
AGATTTCTAC GTAGAAGAGG CAAAGTGCGC CGCTTGAAGT ATACTTGGAA GTCTGCTGCA 1920
TATCATTCAA TTAGGAAAAG AAGTACCGAT AAGAAAGACC AGCCGTGCCG TCAATTTAAT 1980
CCATGCAACT GCAAAACTGC TTGCGGGAAG GAATGTACTT GTTTGCTAAA CGGGACTTGC 2040
TGCGAGAAGT ACTGCGGTTG CCCAAAGAGC TGCAAGAACA GGTTTAGAGG TTGTCATTGT 2100
GCCAAAAGCC AGTGTCGGAG CCGTCAATGT CCGTGCTTTG CTGCAGATCG GGAATGTGAT 2160
CCTGATGTTT GTAGGAATTG CTGGGTCATT GGTGGGGATG GTACGCTTGG GGTCCCTAGC 2220
CAAAGAGGCG ATAATTATGA GTGCAGGAAT ATGAAATTAC TCCTGAAACA ACAACAAAGG 2280
GTTTTACTTG GAATATCTGA TGTATCTGGT TGGGGAGCTT TCCTAAAGAA CAGTGTAAGT 2340
AAACACGAAT ATCTCGGGGA ATACACAGGA GAGCTGATAT CACATAAAGA AGCAGATAAA 2400
CGAGGGAAGA TATATGATCG CGAGAATTCC TCTTTTCTCT TTAATCTAAA TGATCAGGCA 2460
CATGCTTATA GGAAAGGAGA CAAACTGAAG TTCGCCAATC ATTCCCCTGA ACCTAACTGT 2520
TACGCAAAGG TCATTATGGT TGCTGGAGAT CATAGAGTGG GTATTTTTGC AAAGGAGAGG 2580
ATATTGGCTG GAGAAGAACT GTTTTATGAT TACAGGTATG AGCCAGATCG AGCTCCTGCT 2640
TGGGCCAGAA AACCTGAAGC TTCAGGTTCT AAGAAAGATG AGAATGTTAC ACCTTCTGTT 2700
GGTAGACCCA AGAAGGTTGC TTAG 2725
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0078 Bo4g151570.1 Brassica oleracea 98 0.0 1643
WERAM-Arl-0078 fgenesh2_kg.4__ 268__ AT2G23380.1 Arabidopsis lyrata 86 0.0 1418
WERAM-Art-0042 AT2G23380.1 Arabidopsis thaliana 87 0.0 1414
WERAM-Pot-0090 POPTR_0007s10830.1 Populus trichocarpa 66 0.0 1033
WERAM-Thc-0002 EOX91474 Theobroma cacao 65 0.0 1030
WERAM-Glm-0123 GLYMA11G05760.1 Glycine max 62 0.0 979
WERAM-Viv-0045 VIT_07s0031g00320.t01 Vitis vinifera 65 0.0 977
WERAM-Prp-0027 EMJ05861 Prunus persica 64 0.0 966
WERAM-Met-0123 AES94654 Medicago truncatula 61 0.0 936
WERAM-Sol-0043 Solyc03g044380.2.1 Solanum lycopersicum 58 0.0 877
WERAM-Amt-0039 ERN12071 Amborella trichopoda 56 0.0 831
WERAM-Sob-0129 Sb10g004560.1 Sorghum bicolor 55 0.0 830
WERAM-Zem-0088 GRMZM2G157820_P02 Zea mays 56 0.0 819
WERAM-Orbr-0071 OB06G19800.1 Oryza brachyantha 54 0.0 806
WERAM-Tra-0327 Traes_7DS_0D1C03C27.1 Triticum aestivum 55 0.0 805
WERAM-Orr-0063 ORUFI06G11210.1 Oryza rufipogon 54 0.0 799
WERAM-Orb-0062 OBART06G10610.1 Oryza barthii 54 0.0 799
WERAM-Org-0060 ORGLA06G0099400.1 Oryza glaberrima 54 0.0 798
WERAM-Ors-0055 OS06T0275500-01 Oryza sativa 54 0.0 797
WERAM-Orni-0058 ONIVA06G12420.1 Oryza nivara 54 0.0 797
WERAM-Ori-0072 BGIOSGA022686-PA Oryza indica 54 0.0 797
WERAM-Orgl-0061 OGLUM06G11550.1 Oryza glumaepatula 54 0.0 797
WERAM-Orl-0095 KN540737.1_FGP004 Oryza longistaminata 54 0.0 796
WERAM-Orm-0060 OMERI06G12460.1 Oryza meridionalis 54 0.0 793
WERAM-Orp-0060 OPUNC06G10220.1 Oryza punctata 54 0.0 792
WERAM-Sei-0025 Si005930m Setaria italica 59 0.0 720
WERAM-Brd-0025 BRADI1G48340.1 Brachypodium distachyon 54 0.0 660
WERAM-Sem-0113 EFJ11553 Selaginella moellendorffii 46 0.0 647
WERAM-Sot-0098 PGSC0003DMT400084488 Solanum tuberosum 68 3e-171 600
WERAM-Mua-0151 GSMUA_AchrUn_randomP08530_001 Musa acuminata 75 4e-168 589
WERAM-Hov-0013 MLOC_13033.2 Hordeum vulgare 56 3e-160 563
WERAM-Php-0004 PP1S100_146V6.1 Physcomitrella patens 61 2e-130 464
WERAM-Tru-0090 TRIUR3_32462-P1 Triticum urartu 61 5e-120 429
WERAM-Aet-0015 EMT18431 Aegilops tauschii 77 3e-110 397
WERAM-Lep-0063 LPERR06G09370.1 Leersia perrieri 87 4e-83 307
WERAM-Anc-0151 ENSACAP00000014117.3 Anolis carolinensis 41 1e-63 242
WERAM-Meg-0038 ENSMGAP00000003803.1 Meleagris gallopavo 42 2e-63 241
WERAM-Gaga-0032 ENSGALP00000004835.4 Gallus gallus 42 2e-63 241
WERAM-Eqc-0051 ENSECAP00000007382.1 Equus caballus 41 4e-63 240
WERAM-Anp-0120 ENSAPLP00000013704.1 Anas platyrhynchos 42 4e-63 240
WERAM-Ova-0025 ENSOARP00000003537.1 Ovis aries 41 6e-63 239
WERAM-Ran-0133 ENSRNOP00000027640.6 Rattus norvegicus 41 7e-63 239
WERAM-Hos-0074 ENSP00000466924.1 Homo sapiens 41 7e-63 239
WERAM-Vip-0035 ENSVPAP00000003115.1 Vicugna pacos 41 7e-63 239
WERAM-Ict-0042 ENSSTOP00000003390.2 Ictidomys tridecemlineatus 41 7e-63 239
WERAM-Caf-0155 ENSCAFP00000021867.3 Canis familiaris 41 7e-63 239
WERAM-Loa-0104 ENSLAFP00000008734.4 Loxodonta africana 41 8e-63 239
WERAM-Otg-0101 ENSOGAP00000008857.2 Otolemur garnettii 41 8e-63 239
WERAM-Mup-0116 ENSMPUP00000010067.1 Mustela putorius furo 41 8e-63 239
WERAM-Cap-0139 ENSCPOP00000011277.2 Cavia porcellus 41 9e-63 239
WERAM-Mum-0018 ENSMUSP00000102905.1 Mus musculus 41 9e-63 239
WERAM-Pat-0074 ENSPTRP00000015692.3 Pan troglodytes 41 9e-63 239
WERAM-Chs-0038 ENSCSAP00000014717.1 Chlorocebus sabaeus 41 9e-63 239
WERAM-Gog-0035 ENSGGOP00000003323.2 Gorilla gorilla 41 9e-63 239
WERAM-Fia-0008 ENSFALP00000000740.1 Ficedula albicollis 42 9e-63 239
WERAM-Myl-0040 ENSMLUP00000003691.2 Myotis lucifugus 41 1e-62 239
WERAM-Dan-0100 ENSDNOP00000010794.3 Dasypus novemcinctus 41 1e-62 239
WERAM-Orc-0056 ENSOCUP00000005237.3 Oryctolagus cuniculus 41 1e-62 239
WERAM-Mam-0042 ENSMMUP00000008007.2 Macaca mulatta 41 1e-62 239
WERAM-Mod-0134 ENSMODP00000018795.3 Monodelphis domestica 41 1e-62 239
WERAM-Fec-0132 ENSFCAP00000012178.3 Felis catus 41 1e-62 239
WERAM-Caj-0134 ENSCJAP00000024563.2 Callithrix jacchus 41 1e-62 239
WERAM-Poa-0209 ENSPPYP00000023752.1 Pongo abelii 41 2e-62 238
WERAM-Sah-0151 ENSSHAP00000015693.1 Sarcophilus harrisii 40 2e-62 238
WERAM-Mim-0102 ENSMICP00000009411.1 Microcebus murinus 41 2e-62 238
WERAM-Aim-0079 ENSAMEP00000007181.1 Ailuropoda melanoleuca 40 3e-62 237
WERAM-Xet-0126 ENSXETP00000043568.3 Xenopus tropicalis 42 7e-62 236
WERAM-Tag-0042 ENSTGUP00000002850.1 Taeniopygia guttata 41 7e-62 236
WERAM-Lac-0121 ENSLACP00000014514.1 Latimeria chalumnae 40 1e-61 236
WERAM-Sus-0130 ENSSSCP00000018416.2 Sus scrofa 40 1e-61 236
WERAM-Ect-0065 ENSETEP00000006960.1 Echinops telfairi 40 1e-61 236
WERAM-Mae-0144 ENSMEUP00000014518.1 Macropus eugenii 40 1e-61 235
WERAM-Pes-0142 ENSPSIP00000016951.1 Pelodiscus sinensis 40 2e-61 235
WERAM-Soa-0096 ENSSARP00000008932.1 Sorex araneus 41 3e-61 234
WERAM-Orn-0017 ENSONIP00000001530.1 Oreochromis niloticus 41 3e-61 234
WERAM-Ten-0138 ENSTNIP00000014645.1 Tetraodon nigroviridis 40 7e-61 233
WERAM-Dar-0083 ENSDARP00000028564.7 Danio rerio 40 1e-60 232
WERAM-Orla-0044 ENSORLP00000005370.1 Oryzias latipes 39 1e-60 232
WERAM-Pof-0165 ENSPFOP00000013861.2 Poecilia formosa 40 2e-60 232
WERAM-Gam-0167 ENSGMOP00000016781.1 Gadus morhua 40 2e-60 231
WERAM-Ocp-0115 ENSOPRP00000011462.2 Ochotona princeps 41 3e-60 231
WERAM-Xim-0104 ENSXMAP00000009162.1 Xiphophorus maculatus 40 4e-60 231
WERAM-Gaa-0084 ENSGACP00000011232.1 Gasterosteus aculeatus 39 4e-60 230
WERAM-Ere-0041 ENSEEUP00000003328.1 Erinaceus europaeus 51 5e-60 230
WERAM-Bot-0091 ENSBTAP00000012405.5 Bos taurus 39 9e-60 229
WERAM-Paa-0129 ENSPANP00000005684.1 Papio anubis 39 1e-59 229
WERAM-Nol-0037 ENSNLEP00000004408.2 Nomascus leucogenys 39 1e-59 229
WERAM-Leo-0125 ENSLOCP00000015267.1 Lepisosteus oculatus 50 1e-59 229
WERAM-Tut-0200 ENSTTRP00000016466.1 Tursiops truncatus 39 1e-59 229
WERAM-Ora-0003 ENSOANP00000000475.4 Ornithorhynchus anatinus 39 2e-59 228
WERAM-Tar-0184 ENSTRUP00000038365.1 Takifugu rubripes 40 3e-59 228
WERAM-Prc-0157 ENSPCAP00000015189.1 Procavia capensis 50 3e-59 227
WERAM-Ptv-0093 ENSPVAP00000008590.1 Pteropus vampyrus 38 5e-59 227
WERAM-Drm-0004 FBpp0076008 Drosophila melanogaster 37 7e-59 226
WERAM-Tas-0006 ENSTSYP00000000767.1 Tarsius syrichta 38 3e-58 224
WERAM-Dio-0072 ENSDORP00000007246.1 Dipodomys ordii 38 7e-58 223
WERAM-Asm-0135 ENSAMXP00000013017.1 Astyanax mexicanus 38 7e-58 223
WERAM-Pem-0036 ENSPMAP00000004902.1 Petromyzon marinus 40 8e-58 223
WERAM-Chh-0101 ENSCHOP00000011552.1 Choloepus hoffmanni 38 2e-57 221
WERAM-Cis-0017 ENSCSAVP00000003370.1 Ciona savignyi 38 9e-56 216
WERAM-Cii-0042 ENSCINP00000016333.3 Ciona intestinalis 50 2e-54 211
WERAM-Osl-0019 ABP00850 Ostreococcus lucimarinus 42 6e-53 206
WERAM-Tub-0132 ENSTBEP00000014556.1 Tupaia belangeri 37 2e-52 205
WERAM-Cym-0024 CMQ156CT Cyanidioschyzon merolae 44 1e-48 192
WERAM-Tum-0030 CAZ86055 Tuber melanosporum 42 2e-41 168
WERAM-Cae-0014 R06A4.7 Caenorhabditis elegans 39 3e-40 164
WERAM-Scs-0013 EDN99921 Sclerotinia sclerotiorum 37 5e-34 144
WERAM-Zyt-0012 Mycgr3P25126 Zymoseptoria tritici 35 9e-33 140
Created Date 25-Jun-2016