WERAM Information

Tag Content
WERAM ID WERAM-Tra-0129
Ensembl Protein ID Traes_4AL_005C75E88.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Traes_4AL_005C75E88 Traes_4AL_005C75E88.1 Traes_4AL_005C75E88.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 1.50e-43 151.2 464 715
Organism Triticum aestivum
Domain Profile
  HDM JHDM2
              JHDM2.txt   7 gklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.................................. 60 
                            g lNLa klp   ++ ++g kl  AyG  ++ +r++++tnl + + d+v  +                                    
  Traes_4BS_E367B8791.2 464 GFLNLAAKLPPDALQSEVGLKLLIAYGRQQQPGRSDSVTNLMVKMGDVVVHMLMhraemrylcpkslqpeqperiangmavhvnahap 551
                            679********************************************98765544*****************************9999 PP
              JHDM2.txt  61 .......vgilkkkwaeedlkellksieee........eldevtrkrvqd.pkekpgalWhifaakdaekirellekvskeqga...e 129
                                   +g   ++      ++++ks             + +  + + +    ++pgalW++f+++d++ ++++l    +e+      
  Traes_4BS_E367B8791.2 552 vqnlnldMGEQSPE------HTVSKSCSPSvgssaelsSSSHSEQPKTNGvERSQPGALWDVFRRQDVPMLNKYLASNWEELTNnsqA 633
                            66555553333333......34444443333333323222222222222213568**********************99998874445 PP
              JHDM2.txt 130 vppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlipagapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
                             +++++pi dq +yl +++++ L+++yG+e+wt+ Q +g+av+ipag+p qv+nl+s+v++a dF+sPE + e++r+ +e r
  Traes_4BS_E367B8791.2 634 MLSVKHPIYDQAVYLREHHKRVLKDQYGIEPWTFEQHIGEAVFIPAGCPYQVKNLQSTVQLALDFLSPESLRESARMGQEIR 715
                            66799***********************************************************************999876 PP
Protein Sequence
(Fasta)		MINNLPTIYE VVTGTAKKQV KEKHPKSSSK INKSGTKPSR QPEPNSRGPK MPPPPKDEDD 60
SGGEEEEGEE HEKALCGACN DNYGQDEFWI CCDACETWFH GKCVKITPAK AEHIKHYKCP 120
NCSSSSKRAR A 131
Nucleotide Sequence
(Fasta)		CTCCATCCCA ATCTCCTCTG CTCGTCAGCT GCTAGGAGAT AGCACTGGAG CTTCCCGCCT 60
CCCCCATCTC ACCTTCGAGC TCCCATGGCG CTGCAGCCCC ATCCTCTCCT CTGACCTAGT 120
AGCTGCCTAC CCCTAAGCCT CCTAAGAGCT GGTGCTGGGT AAACGCTCAC CTAGCACCTG 180
GAGCCTTTTT AAGCCTTACT ACTGTCCATG GAGTATCTCT TGTTTTCTAT GCATATTTTG 240
ATTTAAGTTT TTGATACATT ATTAACATCA TGATCAACCC ATTCCTGCTA ATGAATAACG 300
AATTTGCTGT TTTAGTCATC ATTTCTTATA ATCCATCAAC AGTTGAACCA AAAGATGTGC 360
AGATATATCA GTAGAGTTTT ACAACGGAGT ACGCGAAAGG ACACACCACC TAAAATGGAA 420
CTACCATTTT GTAGGAACAG ACATGCATGC ATGCATACTT GCAATTGAAA TGATTGTACA 480
TGAGTAAATT GAAATTATTT GAGCAGTTCT GGATATGCAA ATTTGAAAAT TCAGTTGGAG 540
TATCTACGGT CAACAGTTTT TGCTTTAAAT GAATTGTCTA GGTATTTCTG CTTATCAAAT 600
GTTGTTCTCT TGCAAATGTG AAGTTTGGTT AGGTTGACAG GTGAGCCTTT TTATGTACTC 660
TCTTTGCTGT TGTTGTGATC TTTGGTTTCT TATGTGGATT CTGAGATTAA AAAATCGTTA 720
ACCATCTTGT ATAGATACAA GTTTTCTCTT GTCATATTTA GTCCCTTTAG ATATTTCATT 780
CTTTTAAAGG TGTGATTGTA TTTCTTATGA TTGTATTTCT TACATATAGT GAAGATCAGC 840
GTCATTAGTT ACATTTTGTG TTTTTGTTGC AGGAAGCGGC TTTTTAGCAT GATAAACAAC 900
CTCCCCACCA TATATGAGGT TGTCACCGGA ACTGCGAAGA AGCAGGTCAA AGAAAAACAC 960
CCCAAAAGCA GCAGCAAGAT AAATAAATCT GGCACTAAGC CATCTCGCCA GCCAGAACCC 1020
AACTCAAGGG GTCCAAAGAT GCCACCACCT CCGAAGGATG AGGACGACAG TGGAGGCGAG 1080
GAAGAAGAGG GAGAAGAACA TGAAAAGGCA TTATGTGGTG CGTGTAACGA TAACTATGGA 1140
CAGGATGAAT TCTGGATCTG CTGTGATGCT TGTGAGACAT GGTTCCACGG TAAGTGTGTG 1200
AAGATCACTC CTGCCAAAGC TGAGCACATC AAGCACTACA AATGCCCAAA TTGCAGCAGC 1260
AGTAGCAAGA GGGCCAGAGC ATGATATCGG ATTCCTCCAT GGCTCATGTC TGAAGATCCA 1320
AGGATTTGAC TCACTGTAAA GACGCATGTG GGACGGAATG CCCAATGGAT GTGCATTCAG 1380
TTGTTGCTTT GAGATTAATA CCAGCTTTAG GGGTCTTGCT GTGTTGTTAT TTGGTGTATG 1440
TCGGTGATGT TCTAGATTTA CTTGTAGTCG TAGCAACTAA TTGTAACAGC TTGTATGTCT 1500
TGGAGCCTTG TCAGTGCGCC TGTTCTGGAC TCTCAGTGTC CTAGGTCCCG TGATGTATCA 1560
TGTCATCATG TACCCTTGTT GTAATTTGTT GAAGAATCGC CTGTTATCTT AGCTTTTACA 1620
GCCTAGTTAT TTGGACATGG TATCTAGCAT CTACACATGG TTCCACTGTT TTAGAACTTG 1680
GTAAATGGTA AGTAGTTGGG TGTTTGTCTA CTCGGGAAAT CACGGCTGCT GGTTCAATGT 1740
TTAAGATGGA TTGTCGGCGG TGCTTGCCAC AAGTGTATAG ATAGTGCCCA CTCTCCGACG 1800
CTTTTGAGGC AGCCTAATCT CCGTGTAATC TGGCGGGTTT GACTTGTGCA GTGCTCGACT 1860
TTTGTGAGAT GGAACACACG CACCCAGATT GGCAAGAGGC AGGAAGAGTA GACTGCATCC 1920
GATGCCATTG CTGCTGCCCC GCTAGTTTAC AC 1953
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Aet-0103 EMT33233 Aegilops tauschii 100 2e-56 214
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 87 2e-52 201
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 87 1e-51 198
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 87 1e-51 198
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 87 1e-51 198
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 87 1e-51 198
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 87 1e-51 198
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 87 1e-51 198
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 87 1e-51 198
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 87 1e-51 198
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 87 2e-51 197
WERAM-Zem-0010 GRMZM2G008259_P01 Zea mays 83 1e-49 191
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 85 1e-49 191
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 86 5e-48 186
WERAM-Brd-0116 BRADI4G40230.1 Brachypodium distachyon 73 7e-44 172
WERAM-Sob-0083 Sb05g007010.1 Sorghum bicolor 85 2e-42 167
WERAM-Mua-0010 GSMUA_Achr10P16300_001 Musa acuminata 65 2e-35 144
WERAM-Sei-0086 Si023009m Setaria italica 63 8e-35 142
WERAM-Prp-0081 EMJ24886 Prunus persica 67 4e-33 137
WERAM-Pot-0164 POPTR_0018s05470.1 Populus trichocarpa 60 2e-32 134
WERAM-Glm-0185 GLYMA15G03160.1 Glycine max 58 4e-32 133
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 62 4e-32 133
WERAM-Met-0172 KEH18446 Medicago truncatula 60 8e-32 132
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 59 3e-31 130
WERAM-Arl-0130 scaffold_500181.1 Arabidopsis lyrata 59 3e-31 130
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 62 5e-31 129
WERAM-Amt-0088 ERM99796 Amborella trichopoda 59 7e-31 129
WERAM-Art-0035 AT2G02470.1 Arabidopsis thaliana 58 2e-30 127
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 60 3e-30 127
WERAM-Thc-0104 EOY29997 Theobroma cacao 58 7e-30 125
WERAM-Brr-0011 Bra002307.1-P Brassica rapa 54 1e-29 125
WERAM-Bro-0179 Bo9g151850.1 Brassica oleracea 54 2e-29 124
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 50 3e-24 107
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 47 2e-23 104
WERAM-Tru-0043 TRIUR3_20050-P1 Triticum urartu 46 1e-22 101
Created Date 25-Jun-2016