WERAM Information

Tag Content
WERAM ID WERAM-Pot-0123
Ensembl Protein ID POPTR_0011s03030.1
Gene Name POPTR_0011s03030g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0011s03030 POPTR_0011s03030.1 POPTR_0011s03030.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 6.20e-22 78.6 100 440
Organism Populus trichocarpa
Domain Profile
  Ac_Reader Bromodomain
           BROMO.txt   3 hevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                         h+  ++F++pvdp  l+ipdY+ ii  PmdL t+k++l ++ Y s++ef++D+rl f+Na+ yn++ + v
  POPTR_0011s03030.1 100 HPAGWVFNKPVDPVaLNIPDYFSIISIPMDLGTVKSKLGKNCYASIKEFADDIRLTFSNAMLYNPPTNNV 169
                         7889*************************************************************98765 PP
           BROMO.txt  28 ePmdLstikerleeg 42 
                          Pm++   kerle++
  POPTR_0011s03030.1 426 DPMKMRQEKERLERR 440
                         69999999****986 PP
Protein Sequence
(Fasta)		MIAAGSVVMK KLTIKIASQR IEVIPGKKLL AAERSCSVSV SENPGSQTSK SEIVKQKSSV 60
SGSRKRGPPK MIECKQQKRL KMDRAVTQQC SALLKSLMVH PAGWVFNKPV DPVALNIPDY 120
FSIISIPMDL GTVKSKLGKN CYASIKEFAD DIRLTFSNAM LYNPPTNNVH KMAEELNGIF 180
ETSWKALEDK WNHEGPKFGS GKIISGQTTQ IIDSRPNCPR TPPLHSNALP KKSKPSEEKA 240
KPTKPAGVCK SHVPSSYKGV KWQSSVIGTD GGGRHACVSK NVKPLLIPVA SNCSSCGSNT 300
CQCRLQSDSN HTNSDISSER SSGRDQRACS TDTSKPEKSM PVPQMSKSDP DSDGAVSALD 360
DENICPSSQL TTPAADAASG EDWSSLFDVP LSPTKALRYA TIKHRFADTI LKAQNKAPLH 420
DGDKADPMKM RQEKERLERR QREEKSWIEA QIRAAEAASR RREEMELKMQ REREREAARI 480
ALQKMEKTVE IEQNLDIQRE LERLCGCSIS FDFRFGSGKM EVVKKGEIGA CIGSPLERLG 540
LFMKDDIEDE DGGEFLDGDG EEGEILC 567
Nucleotide Sequence
(Fasta)		AAAAGAAAAA ATAAAAAAAA AAAAAAAAGA AAAAACCCTA AAATAGATTA CAGAGCGTGA 60
GCGAGAGCGA GAGAGCTCAC TCTCAAGTAG ACACTGCCCT ACAAAACTAC CTTGCCTCTT 120
GCCCTTCTTG CAGTCAAATC TTCTTCCAGA GCAGCCTGTG ATCTACCCTT TTGGATCCTG 180
GGCACTGCTT GGCACAGTGC TGCTGGTCAT ATAATTTTGG TGGTGCCTGG TAAGCTGGAA 240
ATCTGAGGTT ACTCCTCTCA GGTGCTTTCA GCTCATCACA ATGATTGCTG CTGGGAGTGT 300
AGTGATGAAG AAGTTGACAA TTAAGATTGC TTCCCAAAGA ATAGAAGTTA TTCCTGGGAA 360
AAAGTTGCTT GCTGCTGAAC GTAGTTGCAG TGTTTCTGTG AGTGAGAATC CTGGTTCTCA 420
GACAAGTAAA TCAGAAATTG TGAAGCAGAA ATCTTCTGTG TCAGGTTCTA GGAAGCGTGG 480
ACCACCAAAG ATGATAGAGT GTAAACAGCA GAAGAGGCTG AAGATGGACC GTGCAGTGAC 540
ACAACAGTGT TCTGCCCTTC TAAAATCACT GATGGTTCAT CCAGCTGGCT GGGTTTTCAA 600
TAAGCCTGTG GATCCAGTAG CACTGAATAT TCCTGATTAT TTCTCTATTA TATCAATTCC 660
CATGGATCTA GGAACAGTAA AGTCTAAGCT GGGAAAGAAT TGTTATGCTA GCATCAAGGA 720
GTTTGCAGAT GATATCAGAC TGACCTTTTC AAATGCCATG CTGTATAATC CTCCGACAAA 780
TAATGTCCAT AAAATGGCAG AGGAACTGAA TGGGATTTTT GAGACAAGTT GGAAAGCTTT 840
AGAGGATAAA TGGAATCATG AAGGACCTAA GTTTGGAAGT GGAAAGATTA TAAGTGGACA 900
GACAACACAA ATCATTGATT CCAGACCGAA TTGTCCCAGA ACACCTCCTC TGCACAGCAA 960
TGCTTTGCCA AAGAAGTCAA AACCATCTGA AGAAAAGGCA AAGCCTACTA AACCAGCAGG 1020
GGTGTGCAAG TCTCACGTGC CAAGTTCTTA CAAAGGTGTG AAGTGGCAGA GTAGTGTTAT 1080
AGGCACTGAT GGTGGTGGAA GACATGCATG CGTCTCTAAG AATGTGAAGC CATTGTTGAT 1140
CCCAGTTGCC TCAAACTGTA GTAGCTGTGG CAGTAATACT TGTCAATGCA GGCTCCAAAG 1200
TGATTCAAAC CATACAAACT CAGATATATC ATCTGAGAGA TCATCAGGGA GAGATCAGCG 1260
TGCATGTAGC ACTGATACCT CCAAACCGGA AAAAAGCATG CCTGTACCAC AGATGAGCAA 1320
ATCAGATCCA GATTCTGATG GGGCTGTTAG TGCTTTGGAT GATGAAAATA TATGTCCCAG 1380
TTCCCAGCTT ACAACTCCGG CCGCAGATGC AGCATCTGGA GAAGACTGGA GCTCTCTCTT 1440
TGATGTTCCG TTGTCTCCAA CTAAAGCTCT CCGTTATGCA ACAATAAAAC ATCGATTTGC 1500
AGATACTATT TTAAAAGCTC AAAATAAGGC ACCGCTTCAT GATGGTGATA AAGCTGATCC 1560
AATGAAGATG CGGCAGGAGA AGGAAAGATT GGAAAGGCGG CAGCGGGAAG AGAAGTCTTG 1620
GATTGAAGCA CAAATCCGAG CTGCTGAAGC TGCCTCTCGA AGGAGGGAAG AGATGGAACT 1680
GAAAATGCAA CGGGAGAGGG AAAGAGAAGC TGCTCGAATT GCGCTACAAA AGATGGAAAA 1740
GACTGTTGAG ATTGAACAGA ACCTAGATAT CCAAAGAGAA CTGGAGAGGC TCTGTGGCTG 1800
TTCAATATCA TTTGATTTCC GTTTTGGCAG TGGAAAGATG GAAGTGGTAA AAAAGGGAGA 1860
AATTGGAGCT TGCATCGGTA GCCCGCTTGA GCGGTTGGGT TTGTTTATGA AAGATGACAT 1920
TGAAGATGAG GATGGTGGGG AGTTTCTGGA TGGAGATGGA GAAGAGGGGG AGATACTCTG 1980
TTAA 1985
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0078 EOY27851 Theobroma cacao 55 1e-121 434
WERAM-Prp-0052 EMJ13574 Prunus persica 52 4e-111 399
WERAM-Viv-0064 VIT_10s0003g02240.t01 Vitis vinifera 48 3e-103 373
WERAM-Glm-0166 GLYMA13G29430.3 Glycine max 45 1e-91 334
WERAM-Met-0039 AES64085 Medicago truncatula 43 3e-80 296
WERAM-Arl-0014 Al_scaffold_0008_162 Arabidopsis lyrata 37 4e-52 203
WERAM-Brd-0049 BRADI2G34827.1 Brachypodium distachyon 39 3e-47 187
WERAM-Sol-0025 Solyc02g071510.2.1 Solanum lycopersicum 46 4e-47 186
WERAM-Amt-0037 ERN14948 Amborella trichopoda 35 2e-46 184
WERAM-Brr-0114 Bra022044.1-P Brassica rapa 37 1e-45 181
WERAM-Art-0138 AT5G46550.1 Arabidopsis thaliana 36 3e-45 180
WERAM-Sot-0022 PGSC0003DMT400018643 Solanum tuberosum 54 3e-45 180
WERAM-Zem-0111 GRMZM2G317652_P01 Zea mays 35 2e-42 171
WERAM-Mua-0077 GSMUA_Achr4P27780_001 Musa acuminata 55 3e-42 170
WERAM-Bro-0037 Bo2g130230.1 Brassica oleracea 59 3e-40 163
WERAM-Sob-0081 Sb05g004810.1 Sorghum bicolor 46 5e-39 159
WERAM-Sei-0094 Si026157m Setaria italica 46 2e-37 154
WERAM-Orni-0076 ONIVA07G15550.1 Oryza nivara 50 7e-37 152
WERAM-Ori-0085 BGIOSGA025772-PA Oryza indica 50 1e-36 152
WERAM-Orl-0088 KN539984.1_FGP007 Oryza longistaminata 50 1e-36 152
WERAM-Orr-0078 ORUFI07G16200.1 Oryza rufipogon 50 1e-36 152
WERAM-Orgl-0073 OGLUM07G15360.1 Oryza glumaepatula 50 1e-36 152
WERAM-Ors-0069 OS07T0507700-01 Oryza sativa 50 1e-36 152
WERAM-Orm-0073 OMERI07G12670.1 Oryza meridionalis 50 2e-36 151
WERAM-Org-0076 ORGLA07G0128000.1 Oryza glaberrima 50 2e-36 151
WERAM-Orb-0076 OBART07G15690.1 Oryza barthii 50 2e-36 151
WERAM-Orp-0073 OPUNC07G14460.1 Oryza punctata 50 3e-36 150
WERAM-Orbr-0085 OB07G21530.1 Oryza brachyantha 56 3e-35 147
WERAM-Lep-0111 LPERR11G14070.1 Leersia perrieri 55 4e-35 147
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 59 1e-31 135
WERAM-Tra-0252 Traes_6AS_5C6CBFDEF.2 Triticum aestivum 59 2e-31 134
WERAM-Aet-0072 EMT26738 Aegilops tauschii 59 2e-31 134
WERAM-Hov-0110 MLOC_78113.1 Hordeum vulgare 59 6e-31 132
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 46 5e-29 126
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 47 6e-29 126
WERAM-Scp-0043 SPCC1450.02.1:pep Schizosaccharomyces pombe 40 3e-22 104
Created Date 25-Jun-2016