WERAM Information

Tag Content
WERAM ID WERAM-Sot-0089
Ensembl Protein ID PGSC0003DMT400076261
Gene Name PGSC0003DMG400029649
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400029649 PGSC0003DMT400076261 PGSC0003DMT400076261
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 7.80e-49 167.6 400 619
Organism Solanum tuberosum
Domain Profile
  HDM JHDM2
             JHDM2.txt  27 klynAyGlateedrklgttnlhldvsdavnilvy.............................vgilkkkwaeedlkellksieeeeld 86 
                           k++ AyG+ +  +r++++t+lh  ++d vn+l++                             v     +  +e +k+   +++ + ++
  PGSC0003DMT400076261 400 KVHIAYGFPKVLGRGDSVTKLHYALTDTVNVLMHteavvpkveqlvaieklrqihkardqrefVAD--ANRMHESIKTNITNVNGKSVL 486
                           7789*****************************************996666665555444332111..112233334444455555554 PP
             JHDM2.txt  87 evtrkrvqd.....pkekpgalWhifaakdaekirellekvskeqga...evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQkl 167
                            vt    +d      + ++ alW++f+++d++k++e+l+k+ +e+++   + pp+++pi d+++yl++++++rL+eeyG+e+wt+vQkl
  PGSC0003DMT400076261 487 SVTADCETDrsegfEEADDDALWDVFRRQDVPKLEEYLRKHFREFRHigsPFPPVVHPILDKTFYLSAEHKRRLKEEYGIEPWTFVQKL 575
                           44443322211111455789*************************99888999************************************ PP
             JHDM2.txt 168 gdavlipagapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
                           g+av++pag+pHq++nlk  ++v+ dF+s Env+ec+rlt+e+r
  PGSC0003DMT400076261 576 GEAVFVPAGCPHQGRNLKPFINVTLDFISAENVNECIRLTEELR 619
                           *****************************************987 PP
Protein Sequence
(Fasta)		MENKEKESSD MDISNGDEEK IDNSMEKTNK KRKKMNFSSD AENNRKRGKS KMCHQCKKSD 60
KDKLVCCSNC TDKTFCLPCI KQRYPEIPEE AFLSACPDLL NVDVKCTDEE KIVYSKHIVR 120
ALLPALEQLN TEQMIEKLNE YQIGVFPDFE VNTHKAENEK NKSIYCNYCS AFIVDFHRSC 180
SSCSYKLCLT CCKELRNGNL QADASEVRMQ NIDNGPGYLP GMAEVITRDQ TEVAMESKWK 240
PMENGAISCP PKDMGGCSEG TLYLRCLFSE LLIFELLLRA KEIAQKCNLH IDSALDHCSS 300
KSKGEPSTSG PKLRKAAARE NSSDNYLFTP AAVDIQSTNS MHFRLSFSKG EPVIVTDVHD 360
RALRLSWEPT VIWSACRQTM KAADILNCSN WCMHVLNLYK VHIAYGFPKV LGRGDSVTKL 420
HYALTDTVNV LMHTEAVVPK VEQLVAIEKL RQIHKARDQR EFVADANRMH ESIKTNITNV 480
NGKSVLSVTA DCETDRSEGF EEADDDALWD VFRRQDVPKL EEYLRKHFRE FRHIGSPFPP 540
VVHPILDKTF YLSAEHKRRL KEEYGIEPWT FVQKLGEAVF VPAGCPHQGR NLKPFINVTL 600
DFISAENVNE CIRLTEELRK LPRNHDSRKD KFGAMPGPSM PKSSSISEDP SSSMAANRED 660
PSRTSQLILY SPPNKAQETT LVPSQAMKQL INIDQDVEST FHTVQSFLKS LQEQHPRQQS 720
GLPINSTTSS AQIHAKLIYE CSIRLPLAVF ADDLTKEKEV HDAIAALSDN PSSLLSEEQA 780
KQLRRLKYEF PFMVKKCRDL ARSKSSCQEF FTDFEEDRKK LDDWIRSDTR LKAKYEKKEE 840
EARELEERLQ DIRTMQKEIM DERQERSRES QNILLLSQEK AGKIESISNE LVTTEVQMDG 900
LLKKWSNLKS LFP 913
Nucleotide Sequence
(Fasta)		ATGGAAAACA AGGAAAAAGA ATCATCTGAT ATGGATATCA GCAATGGTGA TGAAGAAAAA 60
ATTGATAATT CAATGGAGAA GACGAATAAG AAGAGGAAGA AAATGAATTT TTCTAGTGAT 120
GCGGAAAACA ACAGGAAGAG AGGGAAGTCT AAAATGTGTC ATCAGTGTAA AAAGAGTGAC 180
AAAGACAAAC TTGTGTGTTG TTCCAACTGT ACAGATAAAA CATTTTGCCT TCCTTGCATC 240
AAACAACGGT ACCCTGAGAT ACCAGAAGAG GCCTTCTTAA GTGCATGCCC TGATTTGTTG 300
AATGTAGATG TGAAGTGCAC TGATGAAGAA AAAATCGTCT ACTCTAAACA CATAGTACGC 360
GCACTTTTGC CTGCTTTGGA ACAACTCAAT ACAGAGCAAA TGATTGAAAA GCTGAATGAG 420
TATCAGATTG GAGTATTTCC AGATTTTGAG GTTAATACAC ACAAAGCAGA AAATGAGAAG 480
AACAAGTCCA TTTATTGCAA CTATTGCAGT GCTTTTATTG TTGACTTTCA TCGGAGTTGT 540
TCTAGTTGTT CCTATAAACT TTGCCTTACT TGTTGCAAAG AATTACGGAA TGGCAACTTG 600
CAAGCAGATG CATCCGAGGT GAGGATGCAA AATATTGACA ATGGACCAGG TTATTTGCCT 660
GGAATGGCTG AAGTTATAAC AAGGGATCAA ACCGAGGTCG CTATGGAATC TAAATGGAAA 720
CCCATGGAAA ATGGTGCCAT TTCTTGCCCA CCAAAAGATA TGGGAGGCTG TAGTGAAGGA 780
ACGTTATATT TGAGGTGTCT ATTTTCTGAG TTACTGATAT TCGAGTTGTT ACTGAGAGCT 840
AAGGAAATAG CTCAAAAATG TAACTTGCAT ATAGATTCAG CACTGGACCA CTGCAGTTCA 900
AAATCAAAGG GGGAACCTAG TACTTCTGGT CCCAAGCTAC GTAAGGCAGC TGCTCGGGAA 960
AATTCTAGTG ATAATTACTT ATTCACCCCA GCAGCTGTGG ATATTCAGAG TACAAATTCA 1020
ATGCATTTCC GGCTCTCTTT TTCCAAGGGT GAACCAGTTA TTGTAACTGA CGTTCATGAT 1080
AGAGCATTGC GATTGAGCTG GGAGCCTACG GTAATATGGA GTGCCTGTCG ACAAACCATG 1140
AAGGCTGCTG ATATCTTAAA TTGCTCCAAT TGGTGCATGC ACGTACTCAA CCTTTACAAG 1200
GTACACATTG CTTATGGTTT TCCTAAGGTG CTTGGACGTG GAGACTCGGT CACCAAACTA 1260
CACTATGCTC TGACTGATAC GGTCAACGTA TTGATGCACA CTGAAGCAGT GGTTCCAAAG 1320
GTTGAACAAC TCGTGGCCAT AGAGAAGTTG AGACAGATTC ACAAAGCACG GGATCAGAGG 1380
GAATTTGTAG CTGATGCTAA CAGGATGCAT GAGAGCATTA AGACTAACAT CACTAATGTA 1440
AATGGAAAAT CTGTCCTGAG TGTAACAGCT GATTGTGAAA CAGATAGGTC TGAAGGATTT 1500
GAAGAAGCAG ATGATGATGC TCTATGGGAT GTCTTTAGGA GGCAAGACGT TCCTAAATTG 1560
GAGGAATATC TCAGGAAGCA CTTCAGGGAA TTTAGGCACA TAGGCTCACC GTTTCCACCG 1620
GTTGTTCATC CCATTCTTGA TAAAACTTTC TACTTGAGCG CTGAGCATAA AAGGAGGCTA 1680
AAGGAAGAAT ATGGCATTGA ACCATGGACA TTTGTTCAAA AATTAGGTGA AGCTGTTTTT 1740
GTTCCTGCCG GATGCCCTCA TCAAGGGAGA AATTTAAAGC CCTTTATCAA CGTCACTCTT 1800
GATTTTATTT CTGCTGAAAA TGTGAATGAG TGCATCCGTT TGACTGAGGA GCTTCGCAAA 1860
CTTCCCAGAA ATCATGATTC TAGGAAAGAC AAGTTTGGGG CTATGCCAGG ACCAAGTATG 1920
CCAAAATCTT CTTCCATTTC GGAAGATCCA TCCAGTAGCA TGGCTGCCAA CAGAGAAGAT 1980
CCATCAAGAA CTTCTCAACT TATTCTGTAT TCTCCACCAA ACAAGGCTCA AGAAACCACA 2040
TTGGTTCCTA GTCAAGCGAT GAAGCAGCTC ATCAATATAG ATCAGGACGT TGAATCAACA 2100
TTCCACACCG TTCAGTCATT CTTGAAGTCT TTACAAGAGC AGCATCCCAG GCAACAATCA 2160
GGCCTCCCGA TCAACAGTAC TACTTCTTCA GCACAAATTC ATGCAAAGTT GATATATGAA 2220
TGCTCCATCA GACTGCCTTT GGCGGTATTT GCTGATGACC TGACGAAAGA AAAGGAAGTG 2280
CATGATGCAA TTGCTGCATT AAGTGATAAT CCCTCATCAT TGTTGAGCGA AGAACAAGCC 2340
AAGCAATTGC GAAGACTCAA GTATGAATTC CCTTTCATGG TTAAGAAATG TAGGGACTTG 2400
GCACGATCGA AGTCAAGTTG CCAGGAGTTC TTCACCGACT TTGAAGAGGA CAGGAAAAAA 2460
CTCGATGATT GGATTAGATC AGATACAAGG TTGAAGGCGA AGTATGAGAA AAAGGAGGAA 2520
GAAGCTCGAG AGTTGGAAGA ACGACTTCAA GATATAAGGA CCATGCAGAA AGAAATCATG 2580
GATGAACGAC AAGAACGGTC TCGAGAATCT CAAAACATCT TGTTGCTATC TCAAGAAAAA 2640
GCTGGCAAGA TAGAAAGCAT CAGCAATGAA TTGGTAACAA CAGAAGTGCA GATGGATGGC 2700
TTGTTGAAAA AATGGTCCAA CCTTAAGTCT TTATTCCCCT AG 2743
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0121 Solyc09g091490.1.1 Solanum lycopersicum 59 2e-131 468
WERAM-Orm-0040 OMERI03G20080.1 Oryza meridionalis 37 8e-113 405
WERAM-Prp-0123 EMJ21258 Prunus persica 37 2e-101 368
WERAM-Met-0036 AES62955 Medicago truncatula 36 2e-101 367
WERAM-Orr-0037 ORUFI03G22990.1 Oryza rufipogon 33 7e-95 346
WERAM-Arl-0040 fgenesh1_pm.C_scaffold_8000499 Arabidopsis lyrata 33 6e-94 343
WERAM-Tra-0233 Traes_5DL_9DCF29857.2 Triticum aestivum 34 3e-85 314
WERAM-Aet-0048 EMT13865 Aegilops tauschii 34 5e-85 313
WERAM-Zem-0051 GRMZM2G070885_P01 Zea mays 32 1e-77 288
WERAM-Orp-0097 OPUNC09G07740.1 Oryza punctata 31 2e-75 281
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 35 1e-74 279
WERAM-Thc-0027 EOX99098 Theobroma cacao 38 5e-71 266
WERAM-Pot-0063 POPTR_0005s09360.1 Populus trichocarpa 56 3e-69 261
WERAM-Glm-0245 GLYMA19G12090.1 Glycine max 50 4e-68 257
WERAM-Viv-0065 VIT_10s0042g00830.t01 Vitis vinifera 36 1e-67 256
WERAM-Brr-0086 Bra016801.1-P Brassica rapa 55 5e-67 253
WERAM-Lep-0100 LPERR09G06290.1 Leersia perrieri 54 3e-66 251
WERAM-Bro-0072 Bo4g092680.1 Brassica oleracea 51 1e-65 249
WERAM-Orb-0104 OBART09G09130.1 Oryza barthii 53 1e-65 249
WERAM-Orbr-0109 OB09G15930.1 Oryza brachyantha 53 2e-65 248
WERAM-Orni-0101 ONIVA09G08110.1 Oryza nivara 53 2e-65 248
WERAM-Ori-0112 BGIOSGA030706-PA Oryza indica 53 2e-65 248
WERAM-Sob-0029 Sb02g024010.1 Sorghum bicolor 30 2e-65 248
WERAM-Orgl-0100 OGLUM09G09380.1 Oryza glumaepatula 53 2e-65 248
WERAM-Orl-0059 KN539156.1_FGP008 Oryza longistaminata 53 2e-65 248
WERAM-Art-0023 AT1G62310.1 Arabidopsis thaliana 53 3e-65 247
WERAM-Ors-0092 OS09T0393200-01 Oryza sativa 53 4e-64 244
WERAM-Hov-0014 MLOC_13090.1 Hordeum vulgare 51 2e-62 238
WERAM-Brd-0103 BRADI4G27417.1 Brachypodium distachyon 35 3e-62 238
WERAM-Sei-0128 Si034182m Setaria italica 47 5e-61 233
WERAM-Org-0029 ORGLA02G0333900.1 Oryza glaberrima 36 3e-59 228
WERAM-Mua-0155 GSMUA_AchrUn_randomP11860_001 Musa acuminata 35 2e-58 225
WERAM-Amt-0041 ERN17369 Amborella trichopoda 34 8e-54 209
WERAM-Php-0099 PP1S430_29V6.1 Physcomitrella patens 41 9e-53 206
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 35 7e-27 120
WERAM-Lac-0170 ENSLACP00000020024.1 Latimeria chalumnae 36 9e-27 120
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 34 1e-26 119
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 33 2e-26 119
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 34 3e-26 118
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 34 3e-26 118
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 34 3e-26 118
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 33 3e-26 118
WERAM-Orla-0053 ENSORLP00000006841.1 Oryzias latipes 34 3e-26 118
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 34 3e-26 118
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 35 4e-26 117
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 33 4e-26 117
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 34 5e-26 117
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 34 5e-26 117
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 33 5e-26 117
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 33 5e-26 117
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 33 5e-26 117
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 34 6e-26 117
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 34 6e-26 117
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 33 6e-26 117
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 34 6e-26 117
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 33 6e-26 117
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 34 6e-26 117
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 33 6e-26 117
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 33 6e-26 117
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 33 6e-26 117
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 33 6e-26 117
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 33 7e-26 117
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 33 7e-26 117
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 33 7e-26 117
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 33 7e-26 117
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 33 7e-26 117
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 33 7e-26 117
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 33 7e-26 117
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 33 8e-26 116
WERAM-Ran-0218 ENSRNOP00000067649.2 Rattus norvegicus 34 8e-26 116
WERAM-Xet-0043 ENSXETP00000014664.3 Xenopus tropicalis 34 9e-26 116
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 34 9e-26 116
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 34 9e-26 116
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 34 1e-25 116
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 34 1e-25 116
WERAM-Gaga-0080 ENSGALP00000012399.4 Gallus gallus 34 1e-25 116
WERAM-Tag-0001 ENSTGUP00000000018.1 Taeniopygia guttata 34 1e-25 115
Created Date 25-Jun-2016