WERAM Information

Tag Content
WERAM ID WERAM-Brr-0192
Ensembl Protein ID Bra038440.1-P
Gene Name ATDUF2
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra038440 Bra038440.1 Bra038440.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 6.30e-05 24.1 38 146
Organism Brassica rapa
Domain Profile
  Me_Reader Tudor
      Tudor.txt  2 skvGlrVvakwssdGyfYsgkiVvkghrvesgeeyysikye 42
                   +++G  V+a ++  G ++sg +V   +r+e ++ +y++ ++
  Bra038440.1-P 38 FEEGSVVDAYYK--GGWWSGLVV---KRKE-EDGTYLVYFD 72
                   689*********..********9...7777.5666777666 PP
      Tudor.txt   5 GlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqr 45 
                    G  V+ +ws   ++ +++i+    ++  +ee + +ky d+ 
  Bra038440.1-P 112 GTMVELRWS--SAWRPAMII----KKVENEERFIVKYCDDT 146
                    888******..7*******6....77778999999999986 PP
Protein Sequence
(Fasta)		MQPITKDTEV EVSYEEDGVK GACLIRPVPP KDDGAEEFEE GSVVDAYYKG GWWSGLVVKR 60
KEEDGTYLVY FDSPPDINQF ERKQLRAHLD WSGSKWVRPE NKELGKSEFS SGTMVELRWS 120
SAWRPAMIIK KVENEERFIV KYCDDTSFRC SKRSRISVID SREVRPRQPL FSVGEYELLD 180
RVEVVVGSVW CEGVVRGIVF KGRYMVSFGE TKVASVQVSC SDVRPPMEWE DGIWHKRPKT 240
KSKFFGKFYC RKRKRGHVQH KSDLNDTVRT PTSNVEDTQA TDTMRVLPFA NKSPLWKIYE 300
TMEVFKKLPQ RPHFSPLIES TSEDFREGSA LGMMATFSGL LEKLKDMEAD VTVSELDSLK 360
DTFTKLEEHG FDVTRPLSRI NKLLALKGRQ LKILEGRRGL DKERMDESSK RHKAELEFGE 420
TERKMVEVKR KILELQRQEA ALKEKKEAAE EQKDQACRKI WKVESCARDL GVKLEDVEFD 480
FETIVSAPW 489
Nucleotide Sequence
(Fasta)		ATGCAACCCA TTACAAAAGA CACTGAAGTA GAAGTGTCTT ACGAGGAGGA TGGCGTCAAA 60
GGCGCTTGCT TAATCCGGCC TGTCCCACCT AAGGATGACG GAGCAGAGGA GTTTGAGGAA 120
GGCTCGGTGG TCGACGCTTA TTACAAAGGT GGTTGGTGGA GTGGTCTGGT TGTTAAAAGG 180
AAAGAGGAGG ATGGTACATA TCTTGTTTAT TTCGATTCAC CACCAGACAT CAATCAGTTC 240
GAGCGAAAGC AGCTAAGGGC TCACCTTGAC TGGTCCGGTT CCAAATGGGT CCGACCAGAA 300
AACAAGGAGC TGGGCAAGTC CGAGTTTAGT TCTGGGACCA TGGTTGAGTT GAGATGGTCA 360
TCCGCTTGGC GTCCGGCAAT GATCATTAAA AAGGTGGAGA ATGAGGAGAG ATTCATTGTC 420
AAGTACTGTG ATGATACGTC CTTCAGATGC AGCAAGAGAT CGAGAATCAG TGTCATTGAT 480
TCGCGAGAAG TCAGGCCAAG ACAACCTCTT TTTTCTGTTG GAGAGTATGA GTTGTTGGAT 540
CGTGTTGAGG TGGTTGTTGG TTCTGTATGG TGTGAAGGTG TGGTGAGAGG GATTGTCTTC 600
AAGGGACGGT ACATGGTTAG TTTCGGGGAA ACAAAGGTGG CCTCTGTGCA AGTCAGTTGC 660
TCTGATGTTA GGCCTCCAAT GGAGTGGGAA GATGGGATCT GGCACAAAAG ACCAAAGACA 720
AAATCCAAAT TCTTTGGCAA GTTTTATTGT CGTAAGAGGA AACGAGGACA TGTACAACAC 780
AAGTCAGACC TCAATGATAC TGTGCGAACC CCTACTTCTA ATGTTGAGGA CACTCAAGCA 840
ACGGACACAA TGAGGGTTCT GCCCTTTGCA AATAAGTCAC CGTTGTGGAA GATTTATGAA 900
ACAATGGAAG TCTTCAAGAA ACTGCCACAA CGTCCTCATT TTAGCCCGTT GATTGAGTCG 960
ACTAGTGAAG ATTTCCGTGA AGGGTCTGCG TTAGGGATGA TGGCTACCTT TTCTGGATTA 1020
TTAGAGAAAC TGAAAGATAT GGAGGCCGAC GTGACCGTAA GCGAACTAGA TAGCCTCAAA 1080
GACACGTTTA CCAAGCTAGA GGAGCATGGG TTTGATGTTA CAAGGCCTTT ATCACGGATC 1140
AACAAGCTGT TGGCTCTCAA GGGTAGGCAA CTGAAAATAT TGGAGGGACG TAGAGGTCTT 1200
GACAAAGAGA GGATGGATGA ATCTAGCAAA AGGCACAAGG CTGAACTAGA GTTTGGTGAG 1260
ACCGAGCGCA AGATGGTTGA GGTTAAACGC AAGATTCTCG AGCTGCAAAG GCAAGAAGCG 1320
GCTCTGAAAG AGAAGAAGGA AGCAGCGGAA GAACAGAAGG ATCAAGCCTG CAGAAAGATA 1380
TGGAAGGTGG AGTCATGTGC GAGAGATCTT GGTGTAAAGC TTGAAGATGT GGAGTTTGAT 1440
TTTGAGACAA TTGTGTCTGC TCCTTGGTGA 1471
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0144 Bo8g031980.1 Brassica oleracea 82 0.0 778
WERAM-Prp-0107 EMJ22727 Prunus persica 54 6e-18 89.7
WERAM-Arl-0049 fgenesh2_kg.1__ 977__ AT1G09320.1 Arabidopsis lyrata 30 2e-12 71.6
WERAM-Art-0008 AT1G09320.1 Arabidopsis thaliana 29 8e-11 65.9
WERAM-Sot-0045 PGSC0003DMT400041247 Solanum tuberosum 28 1e-10 65.5
WERAM-Thc-0070 EOY11696 Theobroma cacao 42 1e-08 58.9
WERAM-Pot-0056 POPTR_0005s01460.1 Populus trichocarpa 24 5e-07 53.5
Created Date 25-Jun-2016