WERAM Information

Tag Content
WERAM ID WERAM-Bro-0144
Ensembl Protein ID Bo8g031980.1
Gene Name ATDUF2
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo8g031980 Bo8g031980.1 Bo8g031980.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 0.0005 21.8 9 185
Organism Brassica oleracea
Domain Profile
  Me_Reader Tudor
     Tudor.txt  7 rVvakwssdG...yfYsg 21
                  +V++ + ++G   ++Y++
  Bo8g031980.1  9 EVEVSYDKNGvkgAWYRA 26
                  6888888888888***98 PP
     Tudor.txt   2 skvGlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrk 46 
                   +++Gl V+a ++  G ++sg +V   +r+e ++ +y++ ++  ++
  Bo8g031980.1  78 FEEGLVVDAYYK--GGWWSGLVV---KRKE-EDGTYLVSFDSPPD 116
                   689*********..********9...8877.67888888886655 PP
     Tudor.txt   5 GlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedq 44 
                   G  V+ +ws   ++ +++i+   ++ve +ee + +ky d+
  Bo8g031980.1 152 GTMVELRWS--FAWRPAMII---KEVE-NEEKFIVKYCDD 185
                   77899****..79******8...6665.778899999887 PP
Protein Sequence
(Fasta)		MQPITKDCEV EVSYDKNGVK GAWYRAILGD SPTKSQQHKL LRVRYTTLLK EDRSSHLTEI 60
VDHSLIRPVP PKDDGAEFEE GLVVDAYYKG GWWSGLVVKR KEEDGTYLVS FDSPPDINQF 120
ERKQVLNFGL ILFVICVYMS LKELGKSVFS SGTMVELRWS FAWRPAMIIK EVENEEKFIV 180
KYCDDTSCRF SERSKISVID SREVRPRRPL FSVGEYELLD RVEVVVGSVW SEGVVRGIVF 240
KGRYMVSFGK TKVASVQVSC SDIRPPMEWE DGIWHKRPKT KSKFFGKYYS RKRKRGHVQH 300
KSDLNDTVRT PTTLVKNFAS NVEDTQATDT MRVLPFANKS LLWKIYETME VFKKLPQSPH 360
FSPLIESTSE DFREGSALGM MATFSGLFEK LKDMESDVTI SQLDSLKDSF TKLEEHGFDV 420
TRPLSRINKL LALKGRQLKI LEGRRGLDKE RMDESSIRRK AELEFGETER KMVEVKRKIL 480
ELQRQEAALK EQKEAAEEQK DQACRKIWKV ESCARDLGVK LEDVEFDFET ILSAPW 536
Nucleotide Sequence
(Fasta)		ATGCAACCCA TTACAAAAGA CTGTGAAGTA GAAGTGTCTT ACGACAAGAA TGGCGTGAAA 60
GGCGCTTGGT ACAGAGCCAT TCTTGGAGAC AGCCCAACCA AATCACAACA ACACAAGTTG 120
CTCCGAGTCC GTTACACGAC GCTGCTCAAA GAAGACCGTT CGTCTCACCT GACCGAAATC 180
GTGGATCATA GCTTAATCCG ACCTGTCCCA CCTAAGGATG ACGGAGCTGA GTTTGAGGAA 240
GGCTTGGTGG TCGACGCTTA TTACAAAGGT GGTTGGTGGA GTGGTCTGGT TGTTAAAAGG 300
AAAGAGGAGG ATGGTACATA TCTTGTTTCT TTCGATTCAC CACCAGACAT CAATCAGTTC 360
GAGCGAAAGC AAGTTTTGAA CTTTGGACTT ATCCTCTTTG TTATATGTGT TTATATGTCT 420
TTGAAGGAAT TGGGCAAGTC CGTGTTTAGT TCTGGGACCA TGGTTGAGTT GAGGTGGTCT 480
TTTGCTTGGC GTCCGGCAAT GATAATTAAA GAGGTGGAGA ATGAGGAGAA ATTCATTGTC 540
AAGTACTGTG ATGATACGTC CTGCAGATTC AGCGAGAGAT CGAAAATCAG TGTCATTGAT 600
TCGCGAGAAG TCAGGCCAAG ACGGCCTCTT TTTTCTGTTG GAGAGTATGA GTTGTTGGAT 660
CGTGTTGAGG TGGTTGTTGG TTCTGTATGG TCTGAAGGTG TTGTGAGAGG GATTGTCTTC 720
AAGGGACGGT ACATGGTTAG TTTCGGGAAA ACAAAGGTGG CCTCTGTGCA AGTCAGTTGC 780
TCTGATATTA GGCCTCCAAT GGAGTGGGAA GATGGGATCT GGCACAAAAG ACCAAAGACA 840
AAATCCAAAT TCTTTGGCAA GTATTATAGT CGTAAGAGGA AACGAGGACA TGTACAACAC 900
AAGTCAGACC TCAATGATAC TGTGCGAACC CCTACTACTT TGGTGAAGAA CTTTGCTTCT 960
AATGTGGAGG ACACTCAAGC AACGGACACA ATGAGGGTTC TGCCCTTTGC AAATAAGTCA 1020
CTGTTGTGGA AGATTTATGA AACAATGGAA GTCTTCAAGA AACTGCCACA AAGTCCTCAT 1080
TTTAGCCCGT TGATTGAGTC GACTAGTGAA GATTTCCGTG AAGGGTCTGC GTTAGGAATG 1140
ATGGCTACCT TTTCTGGATT ATTTGAGAAA CTGAAAGATA TGGAGTCCGA CGTGACCATA 1200
AGCCAACTAG ATAGCCTCAA AGACTCGTTT ACCAAGCTAG AGGAGCATGG ATTTGATGTT 1260
ACAAGGCCTT TATCACGGAT CAACAAGCTG TTGGCTCTCA AGGGTAGACA ACTGAAAATA 1320
TTGGAGGGAC GTAGAGGTCT TGACAAAGAG AGGATGGATG AATCTAGCAT AAGGCGCAAG 1380
GCTGAACTAG AGTTTGGTGA GACGGAGCGC AAGATGGTTG AGGTTAAACG CAAGATTCTC 1440
GAGCTTCAAA GGCAAGAAGC GGCTCTGAAA GAGCAGAAGG AAGCGGCGGA AGAACAGAAG 1500
GATCAAGCCT GCAGAAAGAT ATGGAAGGTG GAGTCATGTG CGAGAGATCT TGGTGTAAAG 1560
CTTGAAGATG TGGAGTTTGA TTTTGAGACA ATTTTGTCTG CTCCTTGGTG A 1612
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0192 Bra038440.1-P Brassica rapa 82 0.0 778
WERAM-Prp-0107 EMJ22727 Prunus persica 48 8e-23 105
WERAM-Sot-0045 PGSC0003DMT400041247 Solanum tuberosum 31 7e-14 76.3
WERAM-Arl-0049 fgenesh2_kg.1__ 977__ AT1G09320.1 Arabidopsis lyrata 30 3e-12 70.9
WERAM-Art-0008 AT1G09320.1 Arabidopsis thaliana 28 5e-10 63.5
WERAM-Thc-0070 EOY11696 Theobroma cacao 32 6e-10 63.2
WERAM-Pot-0056 POPTR_0005s01460.1 Populus trichocarpa 39 2e-08 58.5
Created Date 25-Jun-2016