WERAM Information

Tag Content
WERAM ID WERAM-Pot-0056
Ensembl Protein ID POPTR_0005s01460.1
Gene Name POPTR_0005s01460g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0005s01460 POPTR_0005s01460.1 POPTR_0005s01460.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 0.01 17.2 17 302
Organism Populus trichocarpa
Domain Profile
  Me_Reader Tudor
           Tudor.txt  2 skvGlrVvakwssdG...yfYsgkiVvkghrvesgeey 36
                        +k+G +V+ + +++G    fY g++V     + ++ + 
  POPTR_0005s01460.1 17 FKPGSKVEIMSEEEGfrgSFYTGTVV-----KATRTSK 49
                        689999999999999999*******7.....3344444 PP
           Tudor.txt  12 wssdGyfYsgkiVvkgh 28 
                            +  +++g i    +
  POPTR_0005s01460.1  98 H--NDGWWEGVI----T 108
                         3..467999999....2 PP
           Tudor.txt  16 G...yfYsgkiVvkghrvesgeeyysiky 41 
                         G   +++ ++iV      ++g+  y+i+y
  POPTR_0005s01460.1 219 GfkgAWFAATIV-----EPVGKDKYLIEY 242
                         4555*******7.....679999999998 PP
           Tudor.txt   7 rVvakwssdGyfYsgkiVvkghrvesge 34 
                         +V+a ++   +++ g +     +v++ +
  POPTR_0005s01460.1 281 EVDALYN--DAWWVGVV----SKVNTFP 302
                         7999999..99***999....6666554 PP
Protein Sequence
(Fasta)		MPPKSTPKSK PNQNPHFKPG SKVEIMSEEE GFRGSFYTGT VVKATRTSKF IVEYDKLFED 60
EEGTKPLQET VNEFQIRPIA PREKKREFKF SEEVDAFHND GWWEGVITEV NEDGNFAVFF 120
RSTKEQIEFG EEDLRLHREW VNGAWKPTLE GEEEEEVKEK ENEGSRNKRK LVEEEVTKEV 180
KRRVNKKVPD TTQEKPIESP KDAKFSKGML VEVSSDEDGF KGAWFAATIV EPVGKDKYLI 240
EYQTLRTEDD SDFLREEIDT VHIRPHPPQT IIIDRFKKLE EVDALYNDAW WVGVVSKVNT 300
FPKYSVFFKD SNEELEFQHS DLRPHQDWIN GKWVTPSKAL KL 342
Nucleotide Sequence
(Fasta)		CCAACAGAAT CTCTCTATCT CTATCTCTCT CTTTCTCTAG GGCGCCAAAA TCCCTAAAAA 60
CACTAAATCT GGAATAAACC CTAAACCCGT TACCTAACAA ACCACAAAAA TGCCGCCAAA 120
ATCCACGCCC AAATCAAAAC CCAACCAAAA CCCACATTTC AAACCAGGCT CAAAAGTAGA 180
AATCATGTCA GAAGAGGAAG GATTCAGAGG CTCCTTCTAT ACAGGAACAG TAGTGAAGGC 240
AACAAGAACC TCAAAATTCA TTGTTGAATA TGACAAGCTG TTTGAAGATG AAGAAGGGAC 300
AAAACCCTTG CAGGAAACAG TCAATGAGTT CCAAATAAGA CCAATAGCCC CAAGAGAGAA 360
GAAGAGGGAG TTCAAGTTTA GTGAAGAAGT TGATGCTTTT CATAACGATG GGTGGTGGGA 420
AGGTGTGATA ACTGAGGTGA ATGAGGATGG GAATTTTGCT GTGTTTTTTA GGAGTACTAA 480
AGAGCAGATT GAGTTTGGCG AGGAGGATTT GAGGTTGCAT AGGGAGTGGG TTAATGGGGC 540
GTGGAAACCA ACGTTGGAAG GAGAGGAAGA GGAGGAGGTG AAAGAGAAGG AAAATGAGGG 600
TTCTAGAAAT AAAAGGAAAC TCGTTGAAGA AGAAGTGACG AAAGAGGTGA AAAGGAGGGT 660
TAACAAGAAA GTGCCCGATA CAACACAAGA GAAGCCTATT GAATCACCAA AAGATGCAAA 720
GTTTAGCAAG GGAATGCTAG TTGAGGTTAG CAGTGACGAA GATGGTTTTA AAGGTGCTTG 780
GTTTGCTGCA ACTATTGTTG AGCCAGTGGG CAAGGACAAG TACCTTATTG AGTACCAAAC 840
CTTGAGAACC GAAGATGATA GTGATTTTCT GAGGGAAGAG ATTGACACTG TGCACATTAG 900
GCCTCATCCT CCACAAACTA TAATTATTGA TCGATTCAAG AAGTTGGAAG AAGTTGATGC 960
TCTGTACAAT GATGCCTGGT GGGTGGGTGT AGTTTCTAAG GTTAATACTT TCCCAAAGTA 1020
TTCAGTCTTC TTCAAGGATT CCAATGAGGA ATTAGAATTT CAGCACTCTG ACTTAAGGCC 1080
ACATCAAGAC TGGATCAATG GCAAATGGGT CACTCCATCA AAGGCTTTGA AGCTGTGATC 1140
GCTGGAGAAA GTAGTAGAGC TTTGTGAGAG AACCTGCCAT CTTGCTGTAT ATATCGCTGT 1200
AATTCGTATC AATCTCCATT TCGTGGCCTA TGGTAGGAGT AGTAGAATAT CTTGAGGTGT 1260
CTTGCTCGAC AAGGGTTGTA GATTCTGCGG CTGAATTACT GCACTTATAT AATCTGGTTC 1320
TATTCCATTT TCGAAGATGT CTAGTCCATT ATACATGAAA CCTCTCTAGT GCAAACCTTA 1380
AACTGATGTC ATCAAAACAT AAAACAACTG TATGCTGATG CCATATGATT CACCATTTGA 1440
AGTTTCTCCC TATAGAGCTG AATTCTCTGT TGCTTCGCTG CCCTTGTTTG CTAACGACAT 1500
TTATTAGCTC TAGGGAGTTC TCTAGTAACT GGTGCTAGCT TGTGGTTCTT AATATCGTTT 1560
TGCAATTTGC TATCTTACAT GGTCCAACGA CATGTGTGAC CAGAATCTGG CAACCTTCCG 1620
TACCTTT 1628
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0070 EOY11696 Theobroma cacao 48 4e-88 322
WERAM-Art-0008 AT1G09320.1 Arabidopsis thaliana 45 1e-70 263
WERAM-Arl-0049 fgenesh2_kg.1__ 977__ AT1G09320.1 Arabidopsis lyrata 44 2e-69 260
WERAM-Bro-0003 Bo01087s020.1 Brassica oleracea 46 2e-66 249
WERAM-Sot-0045 PGSC0003DMT400041247 Solanum tuberosum 38 3e-59 226
WERAM-Brr-0095 Bra018567.1-P Brassica rapa 38 9e-59 224
WERAM-Prp-0125 EMJ22805 Prunus persica 37 3e-51 199
WERAM-Amt-0093 ERN04860 Amborella trichopoda 30 5e-12 69.3
WERAM-Met-0133 AES98667 Medicago truncatula 31 2e-11 67.0
WERAM-Sol-0109 Solyc09g031580.2.1 Solanum lycopersicum 35 6e-10 62.4
WERAM-Glm-0016 GLYMA02G39300.2 Glycine max 30 4e-09 59.7
WERAM-Hov-0067 MLOC_58085.2 Hordeum vulgare 27 8e-06 48.5
Created Date 25-Jun-2016