WERAM Information

Tag Content
WERAM ID WERAM-Brr-0101
Ensembl Protein ID Bra019757.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra019757 Bra019757.1 Bra019757.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.30e-19 70.3 46 237
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt  4 ClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52
                   C +Cg++ + ++ ++ Cd+C+d +H++C ++  + ++ g swyC +C++
  Bra019757.1-P 46 CKLCGEKAAVTD-CLACDHCEDMYHVSCAHPGGKGMSTG-SWYCINCTA 92
                   99**87777766.**************************.*******85 PP
        PHD.txt   3 iClvCgkddeg 13 
                     C+vC++ +++
  Bra019757.1-P 101 NCVVCERMKTD 111
                    46777433333 PP
        PHD.txt   2 tiClvCg.kddegekemvqCde..Cd.dwfHlkCvklplsslpegkswyCpsC 50 
                    ++C++Cg k+ e+   ++ Cd+  C+ + +H++C++ +l +l+ g+ wyC sC
  Bra019757.1-P 150 ELCRTCGtKVVENG-RFITCDHpfCPhKYYHIRCLTAKLVKLHGGARWYCSSC 201
                    58****63666665.5*********9899**************9989****** PP
        PHD.txt  20 CdeC....ddwfHlkCvklplsslpegkswyCpsCk 51 
                    C +C    dd++H++C+k+p+ s+p++ +w+C++C 
  Bra019757.1-P 203 CRNCltdkDDAYHIYCMKPPRASVPDE-EWFCKTCN 237
                    6666333359***************99.9******7 PP
Protein Sequence
(Fasta)		MAVLGNSLLE LSKTFSTEQL KKFYTRESKP NPNAENIRNV CVYDNCKLCG EKAAVTDCLA 60
CDHCEDMYHV SCAHPGGKGM STGSWYCINC TANGIGSPHE NCVVCERMKT DSRRVDKSTE 120
CKEDSNESEE NSSCNINHGG HKVEVKRDSE LCRTCGTKVV ENGRFITCDH PFCPHKYYHI 180
RCLTAKLVKL HGGARWYCSS CLCRNCLTDK DDAYHIYCMK PPRASVPDEE WFCKTCNAAS 240
QKVRKVRKAY EKKMGTLQKQ NGNLKSNGDS VGGGVDMLLN AADTLKD 287
Nucleotide Sequence
(Fasta)		ATGGCTGTTC TTGGTAATAG CCTCTTAGAG CTTTCAAAGA CGTTTTCTAC CGAACAGTTG 60
AAGAAGTTCT ACACTCGGGA ATCGAAGCCT AATCCTAATG CAGAGAACAT CAGAAATGTC 120
TGTGTTTATG ACAATTGCAA GCTATGTGGA GAGAAGGCAG CGGTGACAGA CTGTTTAGCT 180
TGTGATCATT GCGAAGATAT GTACCATGTC TCATGTGCAC ATCCAGGTGG GAAAGGGATG 240
TCTACGGGAA GTTGGTACTG TATAAACTGC ACAGCTAATG GAATCGGATC ACCTCACGAG 300
AATTGCGTAG TGTGTGAAAG AATGAAGACA GATAGCAGAC GTGTTGATAA AAGTACAGAA 360
TGTAAAGAAG ATTCAAACGA ATCTGAAGAG AACTCAAGCT GCAACATCAA CCATGGAGGT 420
CACAAAGTAG AGGTGAAGAG AGATTCTGAA CTCTGTAGGA CATGTGGAAC AAAAGTGGTG 480
GAGAATGGCA GGTTCATAAC ATGTGATCAC CCTTTTTGCC CACACAAGTA TTACCACATC 540
AGGTGTTTGA CTGCAAAGCT AGTAAAACTA CACGGTGGCG CTCGTTGGTA TTGCTCCTCG 600
TGCCTATGCA GAAACTGTCT AACCGACAAG GATGATGCGT ATCACATATA CTGCATGAAA 660
CCTCCACGTG CATCGGTTCC AGATGAAGAA TGGTTTTGCA AAACTTGTAA CGCTGCAAGT 720
CAGAAAGTCC GTAAAGTGAG AAAGGCTTAT GAGAAGAAGA TGGGGACGTT GCAGAAACAA 780
AATGGGAATC TGAAGAGCAA TGGAGATAGT GTAGGAGGAG GAGTGGACAT GCTTCTAAAC 840
GCAGCCGACA CTCTGAAAGA TTAA 865
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0111 Bo6g083390.1 Brassica oleracea 90 1e-144 509
WERAM-Art-0031 AT1G77250.1 Arabidopsis thaliana 71 1e-112 402
WERAM-Arl-0020 fgenesh1_pg.C_scaffold_2001986 Arabidopsis lyrata 69 5e-110 394
WERAM-Thc-0098 EOY16466 Theobroma cacao 42 3e-58 222
WERAM-Prp-0045 EMJ26345 Prunus persica 41 2e-55 213
WERAM-Pot-0068 POPTR_0005s20620.1 Populus trichocarpa 40 1e-54 210
WERAM-Glm-0157 GLYMA13G09495.1 Glycine max 44 5e-53 204
WERAM-Sol-0066 Solyc04g058190.2.1 Solanum lycopersicum 38 7e-52 201
WERAM-Viv-0110 VIT_18s0001g01580.t01 Vitis vinifera 37 1e-51 200
WERAM-Met-0070 KEH35359 Medicago truncatula 42 3e-48 189
WERAM-Mua-0027 GSMUA_Achr11P18730_001 Musa acuminata 37 2e-41 166
WERAM-Sei-0003 Si000106m Setaria italica 34 3e-34 142
WERAM-Sot-0052 PGSC0003DMT400046397 Solanum tuberosum 40 2e-33 139
WERAM-Aet-0023 EMT29753 Aegilops tauschii 32 3e-33 139
WERAM-Tra-0124 Traes_3DL_9A4F03809.2 Triticum aestivum 32 4e-33 139
WERAM-Tru-0034 TRIUR3_17458-P1 Triticum urartu 32 3e-32 136
WERAM-Sob-0095 Sb07g000565.1 Sorghum bicolor 34 4e-32 135
WERAM-Brd-0051 BRADI2G40700.1 Brachypodium distachyon 32 2e-30 129
WERAM-Hov-0006 MLOC_11639.4 Hordeum vulgare 30 7e-29 124
WERAM-Orp-0081 OPUNC08G00430.1 Oryza punctata 32 2e-28 123
WERAM-Orbr-0006 OB01G28790.1 Oryza brachyantha 31 2e-28 123
WERAM-Zem-0027 GRMZM2G039895_P01 Zea mays 33 1e-27 121
WERAM-Lep-0006 LPERR01G16460.1 Leersia perrieri 30 1e-27 120
WERAM-Orl-0066 KN539407.1_FGP010 Oryza longistaminata 31 2e-27 120
WERAM-Orgl-0082 OGLUM08G00440.1 Oryza glumaepatula 31 2e-27 119
WERAM-Orni-0083 ONIVA08G00360.1 Oryza nivara 31 3e-27 119
WERAM-Ori-0094 BGIOSGA027795-PA Oryza indica 31 3e-27 119
WERAM-Ors-0076 OS08T0105000-01 Oryza sativa 31 3e-27 119
WERAM-Orr-0088 ORUFI08G00420.1 Oryza rufipogon 31 3e-27 119
WERAM-Orm-0080 OMERI08G00680.1 Oryza meridionalis 31 3e-27 119
WERAM-Orb-0085 OBART08G00380.1 Oryza barthii 30 9e-27 117
WERAM-Org-0006 ORGLA01G0155400.1 Oryza glaberrima 31 1e-26 117
WERAM-Amt-0050 ERN13236 Amborella trichopoda 28 7e-18 88.6
WERAM-Orn-0120 ENSONIP00000012272.1 Oreochromis niloticus 30 4e-08 56.2
WERAM-Dar-0173 ENSDARP00000122949.2 Danio rerio 33 5e-08 55.5
WERAM-Ora-0020 ENSOANP00000002890.2 Ornithorhynchus anatinus 29 6e-08 55.5
WERAM-Ten-0096 ENSTNIP00000006980.1 Tetraodon nigroviridis 25 9e-08 55.1
WERAM-Gam-0038 ENSGMOP00000003815.1 Gadus morhua 30 1e-07 54.7
WERAM-Gaa-0138 ENSGACP00000017696.1 Gasterosteus aculeatus 30 1e-07 54.3
WERAM-Xim-0205 ENSXMAP00000016470.1 Xiphophorus maculatus 30 1e-07 54.3
WERAM-Mum-0185 ENSMUSP00000135941.2 Mus musculus 34 2e-07 53.9
WERAM-Otg-0078 ENSOGAP00000005885.2 Otolemur garnettii 30 2e-07 53.9
WERAM-Orla-0181 ENSORLP00000020984.1 Oryzias latipes 30 2e-07 53.9
WERAM-Dan-0166 ENSDNOP00000021359.1 Dasypus novemcinctus 31 3e-07 53.1
WERAM-Caj-0209 ENSCJAP00000036628.3 Callithrix jacchus 30 3e-07 53.1
WERAM-Tar-0071 ENSTRUP00000014027.1 Takifugu rubripes 30 3e-07 53.1
WERAM-Loa-0084 ENSLAFP00000006640.4 Loxodonta africana 31 3e-07 53.1
WERAM-Orc-0212 ENSOCUP00000018080.1 Oryctolagus cuniculus 29 3e-07 53.1
WERAM-Tut-0057 ENSTTRP00000004493.1 Tursiops truncatus 30 3e-07 52.8
WERAM-Sus-0005 ENSSSCP00000000202.2 Sus scrofa 30 3e-07 52.8
WERAM-Mam-0144 ENSMMUP00000020643.2 Macaca mulatta 30 3e-07 52.8
WERAM-Pof-0064 ENSPFOP00000005925.2 Poecilia formosa 31 4e-07 52.8
WERAM-Anc-0148 ENSACAP00000014142.2 Anolis carolinensis 35 4e-07 52.8
WERAM-Ptv-0040 ENSPVAP00000004387.1 Pteropus vampyrus 30 4e-07 52.8
WERAM-Leo-0127 ENSLOCP00000015481.1 Lepisosteus oculatus 30 4e-07 52.8
WERAM-Prc-0037 ENSPCAP00000003628.1 Procavia capensis 30 5e-07 52.4
WERAM-Tas-0126 ENSTSYP00000013377.1 Tarsius syrichta 30 5e-07 52.4
WERAM-Tag-0008 ENSTGUP00000000641.1 Taeniopygia guttata 31 5e-07 52.4
WERAM-Myl-0004 ENSMLUP00000000448.2 Myotis lucifugus 39 5e-07 52.4
WERAM-Bot-0193 ENSBTAP00000028347.5 Bos taurus 31 6e-07 52.4
WERAM-Gaga-0065 ENSGALP00000010110.4 Gallus gallus 31 6e-07 52.0
WERAM-Fia-0003 ENSFALP00000000206.1 Ficedula albicollis 40 6e-07 52.0
WERAM-Meg-0048 ENSMGAP00000004625.2 Meleagris gallopavo 31 6e-07 52.0
WERAM-Lac-0079 ENSLACP00000010253.1 Latimeria chalumnae 31 6e-07 52.0
WERAM-Chs-0076 ENSCSAP00000002864.1 Chlorocebus sabaeus 30 6e-07 52.0
WERAM-Pat-0168 ENSPTRP00000046674.3 Pan troglodytes 30 6e-07 52.0
WERAM-Nol-0046 ENSNLEP00000005663.2 Nomascus leucogenys 30 6e-07 52.0
WERAM-Ova-0045 ENSOARP00000005594.1 Ovis aries 31 7e-07 52.0
WERAM-Anp-0025 ENSAPLP00000003226.1 Anas platyrhynchos 31 7e-07 52.0
WERAM-Ict-0124 ENSSTOP00000012342.2 Ictidomys tridecemlineatus 31 7e-07 52.0
WERAM-Paa-0005 ENSPANP00000006150.1 Papio anubis 30 7e-07 52.0
WERAM-Hos-0018 ENSP00000347325.3 Homo sapiens 30 7e-07 52.0
WERAM-Ran-0263 ENSRNOP00000069442.1 Rattus norvegicus 34 7e-07 52.0
WERAM-Caf-0059 ENSCAFP00000007370.4 Canis familiaris 31 7e-07 52.0
WERAM-Asm-0140 ENSAMXP00000013406.1 Astyanax mexicanus 32 8e-07 51.6
WERAM-Fec-0096 ENSFCAP00000008002.3 Felis catus 31 8e-07 51.6
WERAM-Eqc-0189 ENSECAP00000020200.1 Equus caballus 31 8e-07 51.6
WERAM-Sah-0130 ENSSHAP00000013860.1 Sarcophilus harrisii 31 9e-07 51.6
WERAM-Mup-0098 ENSMPUP00000009152.1 Mustela putorius furo 31 9e-07 51.6
WERAM-Dio-0019 ENSDORP00000002189.1 Dipodomys ordii 31 9e-07 51.6
WERAM-Aim-0081 ENSAMEP00000007326.1 Ailuropoda melanoleuca 30 9e-07 51.6
WERAM-Poa-0043 ENSPPYP00000005112.2 Pongo abelii 30 9e-07 51.6
WERAM-Gog-0092 ENSGGOP00000007801.2 Gorilla gorilla 30 9e-07 51.6
WERAM-Mae-0064 ENSMEUP00000005938.1 Macropus eugenii 30 1e-06 51.6
WERAM-Cap-0018 ENSCPOP00000001682.2 Cavia porcellus 31 1e-06 51.2
WERAM-Ocp-0133 ENSOPRP00000014011.2 Ochotona princeps 30 1e-06 51.2
WERAM-Soa-0040 ENSSARP00000003919.1 Sorex araneus 31 1e-06 51.2
WERAM-Mim-0155 ENSMICP00000015981.1 Microcebus murinus 30 1e-06 51.2
WERAM-Pem-0018 ENSPMAP00000002590.1 Petromyzon marinus 31 3e-06 50.1
WERAM-Caa-0019 KGT68272 Candida albicans 38 9e-06 48.1
Created Date 25-Jun-2016