WERAM Information

Tag Content
WERAM ID WERAM-Pot-0068
Ensembl Protein ID POPTR_0005s20620.1
Gene Name POPTR_0005s20620g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0005s20620 POPTR_0005s20620.1 POPTR_0005s20620.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 5.10e-25 88.6 241 449
Organism Populus trichocarpa
Domain Profile
  Me_Reader PHD
             PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                         +C+ Cg++ +g++ ++ Cd+C++ +H++C++++ +++p + swyC +C +
  POPTR_0005s20620.1 241 SCRRCGEKADGRD-CLVCDSCEEMYHVSCIEPAVKEIPPK-SWYCDNCAA 288
                         5999988888876.9***********************99.9******75 PP
             PHD.txt  27 fHlkCvklplsslp 40 
                         +H +Cv +++ ++p
  POPTR_0005s20620.1 294 IHENCVACERLNCP 307
                         68888888765555 PP
             PHD.txt   2 tiClvCg.kddegekemvqCde..Cd.dwfHlkCvklplsslpegkswyCpsC 50 
                          iC +Cg  +++gek +  Cd+  C+ + +H++C++   + + +g  wyCpsC
  POPTR_0005s20620.1 352 RICKICGsPVSNGEK-INICDHseCPgKYYHVRCLTNR-QLILYGPRWYCPSC 402
                         69****626666655.777***9***99*********9.55559989****** PP
             PHD.txt   4 ClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                         C+ C +d++++k +v Cd+Cd+++Hl+C+ +p+ s+p+g +w+C++C 
  POPTR_0005s20620.1 404 CRGCLTDKDDDK-IVLCDGCDHAYHLYCMIPPRISVPKG-KWFCRRCD 449
                         99**77666666.**************************.*******6 PP
Protein Sequence
(Fasta)		MVGGEGTSNG EGAKERVQHL NMEAMDNGFG NDGGDASSGG SEGFRTYKRR RNMRSSSDSK 60
GQEDGKCFME AASRLSDQES GYCNADKSPL MGQMANGTHS TAKGHAGVLS NGALDESRHH 120
SVPELCQHAF LSILLSEKFT SLCKLLFENF QGMKTGSILS LSFIDRRMKD GAYDHSPMLF 180
CEDIEQFWRK LQGFGAELIS LSKSLSDISK TCCNERFCIK GSDSHGQPEQ KDACCVYRVC 240
SCRRCGEKAD GRDCLVCDSC EEMYHVSCIE PAVKEIPPKS WYCDNCAASG MGSIHENCVA 300
CERLNCPRTQ INQAGDEIGL STQEPFNDFE EASNFSTNNE VQLSSEGTEN IRICKICGSP 360
VSNGEKINIC DHSECPGKYY HVRCLTNRQL ILYGPRWYCP SCLCRGCLTD KDDDKIVLCD 420
GCDHAYHLYC MIPPRISVPK GKWFCRRCDL KIQKLRRVRR AYEKSERYVK KKGEGVKKEC 480
ENRKKLYKEG GEESDKGREG MDMLVTAALK CEVGCQSIEE LKST 524
Nucleotide Sequence
(Fasta)		ATGGTTGGTG GAGAGGGAAC AAGCAATGGC GAGGGTGCAA AAGAAAGGGT TCAGCACTTA 60
AATATGGAAG CAATGGACAA TGGGTTTGGA AATGATGGTG GTGATGCAAG CTCTGGGGGC 120
AGTGAGGGTT TTCGAACTTA CAAGAGACGA AGGAACATGA GGTCAAGTTC GGATAGTAAA 180
GGTCAAGAGG ATGGGAAATG TTTTATGGAA GCTGCTAGTA GATTGTCAGA CCAGGAGTCT 240
GGTTACTGTA ATGCAGATAA GTCACCTTTG ATGGGGCAGA TGGCTAATGG AACTCACAGT 300
ACAGCTAAAG GGCATGCAGG GGTCTTGTCA AATGGAGCTT TGGATGAATC ACGACATCAC 360
AGTGTCCCTG AGTTGTGCCA GCATGCTTTC CTTAGTATTT TACTGTCAGA AAAGTTCACC 420
TCTCTCTGTA AGCTACTGTT TGAAAACTTC CAAGGAATGA AGACTGGCAG CATTCTTAGC 480
CTGAGTTTCA TAGACAGAAG GATGAAAGAC GGAGCTTATG ATCATTCGCC TATGCTTTTC 540
TGTGAAGATA TTGAGCAGTT CTGGAGAAAG CTTCAAGGTT TTGGTGCTGA ATTAATCTCT 600
CTTTCAAAGA GCCTATCAGA CATATCAAAG ACTTGCTGTA ACGAACGGTT CTGCATCAAG 660
GGTTCTGATT CTCATGGTCA ACCAGAGCAA AAGGATGCTT GTTGTGTCTA CAGAGTCTGC 720
AGTTGTAGGC GTTGTGGGGA AAAGGCAGAT GGGAGAGATT GTTTAGTTTG TGATTCATGT 780
GAGGAAATGT ACCATGTCTC CTGTATTGAG CCTGCTGTCA AAGAGATTCC CCCCAAAAGC 840
TGGTACTGTG ACAACTGCGC TGCAAGTGGT ATGGGATCCA TTCATGAGAA TTGTGTAGCG 900
TGTGAGAGGC TGAATTGCCC CAGGACCCAA ATTAATCAAG CTGGTGATGA AATTGGTTTA 960
TCAACTCAAG AACCATTCAA TGATTTTGAA GAGGCATCAA ATTTCAGCAC GAATAATGAG 1020
GTTCAGCTAT CATCAGAAGG GACTGAAAAC ATACGCATCT GTAAAATTTG TGGAAGTCCA 1080
GTGAGCAATG GAGAGAAGAT AAATATATGT GATCACTCTG AATGCCCTGG CAAGTACTAC 1140
CATGTGAGAT GCTTGACAAA TAGGCAGTTA ATATTGTATG GCCCTCGTTG GTATTGCCCT 1200
TCTTGTTTAT GCAGAGGTTG CCTCACTGAT AAAGACGATG ATAAGATTGT TTTATGTGAT 1260
GGCTGTGATC ATGCATACCA CCTTTATTGC ATGATTCCGC CACGCATTTC TGTACCTAAA 1320
GGGAAATGGT TTTGCAGGCG ATGTGATCTG AAAATACAGA AATTACGCAG GGTAAGGAGG 1380
GCATATGAGA AATCCGAAAG GTATGTGAAA AAGAAGGGTG AAGGGGTTAA AAAGGAATGT 1440
GAAAACCGCA AGAAACTGTA CAAGGAAGGT GGAGAAGAAT CAGATAAAGG TAGAGAAGGA 1500
ATGGACATGC TTGTAACTGC AGCACTAAAG TGTGAAGTCG GCTGCCAATC AATTGAAGAG 1560
TTGAAAAGCA CATGACATTT TCAGGAAATT ACAAGATAAA AATTCATGGT TTTAATCATT 1620
GATCATATTG ATTTTGTATG TGTAACTGAT GTCAAGAATT TTGATCCCGC CGCCTTCTGG 1680
GGAAGAATAT TTTGTTAGGC TGTAAACTTA GGTTTTGCTG ACTTTTGGAT ACTCGACTCT 1740
TGGCAGGGCA TGATTCTGAA GGCTAGTACA TTTACTGGTT GGCAAGTGCC AAATACAGGA 1800
CATGGAGTTA CAAGGATCAG GGAATCATTA GATAAGCATG TTGGAATCGA TGTTTTTAAC 1860
AGTAACATCT TGTTCATTTT GTTCCGAACA CGGTTCATTA TTTTTTGTAA GGGAAAGCTA 1920
ATCTCTGTCA GTAATGTTGT AAAATTACAA AACGCAACCG AATTTCAAAC AATCTGTGCT 1980
TTATAATGAG AAGAGAACAT TTTCTTTT 2009
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0098 EOY16466 Theobroma cacao 56 5e-124 442
WERAM-Prp-0045 EMJ26345 Prunus persica 52 2e-119 427
WERAM-Viv-0110 VIT_18s0001g01580.t01 Vitis vinifera 51 1e-111 401
WERAM-Glm-0059 GLYMA06G12451.1 Glycine max 50 4e-104 375
WERAM-Met-0070 KEH35359 Medicago truncatula 45 7e-98 355
WERAM-Sol-0066 Solyc04g058190.2.1 Solanum lycopersicum 45 2e-94 343
WERAM-Art-0031 AT1G77250.1 Arabidopsis thaliana 40 3e-89 326
WERAM-Arl-0020 fgenesh1_pg.C_scaffold_2001986 Arabidopsis lyrata 40 1e-87 320
WERAM-Bro-0119 Bo6g121200.1 Brassica oleracea 41 3e-82 303
WERAM-Brr-0079 Bra015682.1-P Brassica rapa 42 3e-80 296
WERAM-Mua-0027 GSMUA_Achr11P18730_001 Musa acuminata 39 5e-66 249
WERAM-Zem-0027 GRMZM2G039895_P01 Zea mays 35 5e-54 209
WERAM-Sei-0044 Si013357m Setaria italica 35 3e-52 203
WERAM-Orp-0081 OPUNC08G00430.1 Oryza punctata 33 9e-52 202
WERAM-Orgl-0082 OGLUM08G00440.1 Oryza glumaepatula 32 5e-51 199
WERAM-Orni-0083 ONIVA08G00360.1 Oryza nivara 32 1e-50 198
WERAM-Ori-0094 BGIOSGA027795-PA Oryza indica 32 1e-50 198
WERAM-Ors-0076 OS08T0105000-01 Oryza sativa 32 1e-50 198
WERAM-Orr-0088 ORUFI08G00420.1 Oryza rufipogon 32 1e-50 198
WERAM-Orm-0080 OMERI08G00680.1 Oryza meridionalis 32 2e-50 197
WERAM-Brd-0051 BRADI2G40700.1 Brachypodium distachyon 33 3e-50 197
WERAM-Orb-0085 OBART08G00380.1 Oryza barthii 32 4e-50 196
WERAM-Orl-0066 KN539407.1_FGP010 Oryza longistaminata 32 4e-50 196
WERAM-Orbr-0092 OB08G10470.1 Oryza brachyantha 31 3e-49 193
WERAM-Sot-0052 PGSC0003DMT400046397 Solanum tuberosum 46 2e-48 191
WERAM-Lep-0084 LPERR08G00500.1 Leersia perrieri 32 4e-47 186
WERAM-Tra-0124 Traes_3DL_9A4F03809.2 Triticum aestivum 34 1e-46 185
WERAM-Sob-0095 Sb07g000565.1 Sorghum bicolor 32 1e-45 181
WERAM-Hov-0006 MLOC_11639.4 Hordeum vulgare 31 3e-45 180
WERAM-Aet-0047 EMT19108 Aegilops tauschii 31 3e-45 180
WERAM-Tru-0061 TRIUR3_24956-P1 Triticum urartu 31 6e-45 179
WERAM-Amt-0050 ERN13236 Amborella trichopoda 32 5e-44 176
WERAM-Org-0006 ORGLA01G0155400.1 Oryza glaberrima 37 1e-36 151
WERAM-Otg-0078 ENSOGAP00000005885.2 Otolemur garnettii 34 3e-14 77.4
WERAM-Orla-0036 ENSORLP00000004819.1 Oryzias latipes 35 3e-13 74.3
WERAM-Php-0045 PP1S200_118V6.1 Physcomitrella patens 60 7e-13 73.2
WERAM-Mam-0144 ENSMMUP00000020643.2 Macaca mulatta 36 2e-12 71.6
WERAM-Sus-0005 ENSSSCP00000000202.2 Sus scrofa 36 2e-12 71.6
WERAM-Tut-0057 ENSTTRP00000004493.1 Tursiops truncatus 36 2e-12 71.6
WERAM-Ten-0167 ENSTNIP00000016534.1 Tetraodon nigroviridis 34 2e-12 71.6
WERAM-Prc-0037 ENSPCAP00000003628.1 Procavia capensis 36 2e-12 71.2
WERAM-Ptv-0040 ENSPVAP00000004387.1 Pteropus vampyrus 36 2e-12 71.2
WERAM-Ere-0080 ENSEEUP00000007438.1 Erinaceus europaeus 36 2e-12 71.2
WERAM-Xim-0055 ENSXMAP00000005029.1 Xiphophorus maculatus 35 3e-12 71.2
WERAM-Loa-0099 ENSLAFP00000008377.4 Loxodonta africana 36 3e-12 71.2
WERAM-Ran-0263 ENSRNOP00000069442.1 Rattus norvegicus 36 3e-12 70.9
WERAM-Caf-0097 ENSCAFP00000012833.4 Canis familiaris 36 3e-12 70.9
WERAM-Pat-0041 ENSPTRP00000041051.3 Pan troglodytes 36 3e-12 70.9
WERAM-Ocp-0133 ENSOPRP00000014011.2 Ochotona princeps 36 3e-12 70.9
WERAM-Myl-0127 ENSMLUP00000010258.2 Myotis lucifugus 36 3e-12 70.9
WERAM-Mum-0185 ENSMUSP00000135941.2 Mus musculus 36 3e-12 70.9
WERAM-Cap-0033 ENSCPOP00000002700.2 Cavia porcellus 36 3e-12 70.9
WERAM-Aim-0081 ENSAMEP00000007326.1 Ailuropoda melanoleuca 36 3e-12 70.9
WERAM-Fec-0002 ENSFCAP00000000087.3 Felis catus 36 3e-12 70.5
WERAM-Poa-0043 ENSPPYP00000005112.2 Pongo abelii 36 4e-12 70.5
WERAM-Paa-0006 ENSPANP00000012073.1 Papio anubis 36 4e-12 70.5
WERAM-Orc-0058 ENSOCUP00000005384.2 Oryctolagus cuniculus 35 4e-12 70.5
WERAM-Nol-0193 ENSNLEP00000021682.1 Nomascus leucogenys 36 4e-12 70.5
WERAM-Ora-0001 ENSOANP00000000271.1 Ornithorhynchus anatinus 35 5e-12 70.1
WERAM-Gog-0210 ENSGGOP00000027941.1 Gorilla gorilla 35 5e-12 70.1
WERAM-Dan-0166 ENSDNOP00000021359.1 Dasypus novemcinctus 36 5e-12 70.1
WERAM-Miv-0011 MVLG_01737T0 Microbotryum violaceum 28 6e-12 70.1
WERAM-Sah-0130 ENSSHAP00000013860.1 Sarcophilus harrisii 33 7e-12 69.7
WERAM-Pem-0018 ENSPMAP00000002590.1 Petromyzon marinus 35 7e-12 69.7
WERAM-Tas-0126 ENSTSYP00000013377.1 Tarsius syrichta 34 8e-12 69.3
WERAM-Asm-0140 ENSAMXP00000013406.1 Astyanax mexicanus 41 8e-12 69.3
WERAM-Lac-0079 ENSLACP00000010253.1 Latimeria chalumnae 34 8e-12 69.3
WERAM-Dar-0184 ENSDARP00000115827.2 Danio rerio 33 1e-11 69.3
WERAM-Fia-0003 ENSFALP00000000206.1 Ficedula albicollis 35 1e-11 68.9
WERAM-Gaa-0012 ENSGACP00000001522.1 Gasterosteus aculeatus 35 1e-11 68.9
WERAM-Hos-0018 ENSP00000347325.3 Homo sapiens 34 1e-11 68.9
WERAM-Leo-0127 ENSLOCP00000015481.1 Lepisosteus oculatus 33 1e-11 68.9
WERAM-Pof-0024 ENSPFOP00000002462.1 Poecilia formosa 34 1e-11 68.6
WERAM-Mod-0040 ENSMODP00000005845.3 Monodelphis domestica 33 2e-11 68.2
WERAM-Soa-0040 ENSSARP00000003919.1 Sorex araneus 34 2e-11 68.2
WERAM-Ict-0124 ENSSTOP00000012342.2 Ictidomys tridecemlineatus 34 2e-11 68.2
WERAM-Meg-0048 ENSMGAP00000004625.2 Meleagris gallopavo 32 2e-11 67.8
WERAM-Gaga-0065 ENSGALP00000010110.4 Gallus gallus 32 2e-11 67.8
WERAM-Anp-0025 ENSAPLP00000003226.1 Anas platyrhynchos 32 2e-11 67.8
WERAM-Chs-0076 ENSCSAP00000002864.1 Chlorocebus sabaeus 35 3e-11 67.8
WERAM-Drm-0048 FBpp0085418 Drosophila melanogaster 30 3e-11 67.4
WERAM-Mup-0098 ENSMPUP00000009152.1 Mustela putorius furo 33 4e-11 67.4
WERAM-Tar-0215 ENSTRUP00000044838.1 Takifugu rubripes 35 4e-11 67.0
WERAM-Xet-0077 ENSXETP00000024426.3 Xenopus tropicalis 38 5e-11 67.0
WERAM-Bot-0193 ENSBTAP00000028347.5 Bos taurus 33 5e-11 67.0
WERAM-Anc-0148 ENSACAP00000014142.2 Anolis carolinensis 34 5e-11 67.0
WERAM-Ova-0206 ENSOARP00000020382.1 Ovis aries 36 5e-11 66.6
WERAM-Gam-0044 ENSGMOP00000004922.1 Gadus morhua 33 5e-11 66.6
WERAM-Cae-0045 T12D8.1 Caenorhabditis elegans 36 5e-11 66.6
WERAM-Mim-0155 ENSMICP00000015981.1 Microcebus murinus 36 6e-11 66.6
WERAM-Eqc-0142 ENSECAP00000015486.1 Equus caballus 36 6e-11 66.6
WERAM-Mae-0064 ENSMEUP00000005938.1 Macropus eugenii 36 6e-11 66.6
WERAM-Tag-0008 ENSTGUP00000000641.1 Taeniopygia guttata 31 6e-11 66.6
WERAM-Dio-0006 ENSDORP00000000973.1 Dipodomys ordii 47 9e-11 65.9
WERAM-Caj-0209 ENSCJAP00000036628.3 Callithrix jacchus 36 9e-11 65.9
WERAM-Vip-0044 ENSVPAP00000003974.1 Vicugna pacos 47 1e-10 65.5
WERAM-Orn-0204 ENSONIP00000021218.1 Oreochromis niloticus 54 2e-10 65.1
WERAM-Tub-0140 ENSTBEP00000015071.1 Tupaia belangeri 50 2e-10 64.7
Created Date 25-Jun-2016