WERAM Information

Tag Content
WERAM ID WERAM-Sob-0095
Ensembl Protein ID Sb07g000565.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb07g000565 Sb07g000565.1 Sb07g000565.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 5.90e-19 68.8 817 1032
Organism Sorghum bicolor
Domain Profile
  Me_Reader PHD
        PHD.txt   3 iClvC.gkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                    iC  C +k+d g    + Cd C+  +H++C+kl+  +    ++wyCp+C+
  Sb07g000565.1 817 ICKDCgRKADSGG--RIICDRCEATYHVSCLKLAIDEEAP-AKWYCPTCV 863
                    7999944666664..6******************443333.47******7 PP
        PHD.txt   2 tiClvCgkddegekemvqCde..Cd.dwfHlkCvklplsslpegks...wyCpsC 50 
                    ++C +Cg++++++k+++ C +  C+ + +H+ C+k ++   +++k+   wyCpsC
  Sb07g000565.1 931 NLCKHCGTCEDENKKFLVCGHpyCSyKFYHVLCMKESQIASEKQKKqacWYCPSC 985
                    579999877777778**********999********9554444422356****** PP
        PHD.txt    4 ClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51  
                     C+ C k++++e+ +v Cd+Cdd++H++C+ +pl s+p g +wyC sC 
  Sb07g000565.1  987 CRCCFKNKDDEE-IVLCDGCDDAYHIYCTVPPLDSVPRG-NWYCMSCN 1032
                     9*8866666655.**************************.*******7 PP
Protein Sequence
(Fasta)		DGADLILSLP EDVLALISAH LRPRDLLALS AASRRLRRAL SADKAWLAQC RRLLPSPAHL 60
LAWRAAAAGD SLAVCRFLHS AAPLLGLWAH QNPELGNLVA AVPGFLSVVA ARAIPQELSP 120
RLRWAPVFEL LADDHGRPAL LFLHGHHHAH LFPGLLASLQ PHANVIFLEA HTARFARLSF 180
GDRRRLLDSL VAACRITLPP DLVDAPLFAC SDDDLPLLAK RREAMLRLHR EAAGGMVRTP 240
EVQGLLLEAK KKAATTPSPT DGGRRIPLRR SLSAVAGYFR NGLRQMTPMP GREYAGLWGG 300
TFGWPPGRPS DECKPKKALF FLLLSYEEDS EGKLQLIATK VLEGTHYVVH PNGSSMFIAR 360
MGEQSTEPFP WQTDGESRNV DVERGFAGEG IANGYGFRYP GSKPGSLFVL QDGLLAFVWK 420
ETGAVLTLQR LDLEELLKKG ERVPALQPVP NFAYLTKSYS NVFTGFPGSS ASPRSKHLNY 480
MPFSVVFKVQ RFIHHRQWYT SSRQTSTQWW QSINEPQSDP MTIEPTRLLG RAHVFLGAEL 540
LVSHGICFSR FVIYSPVSSP GQNKMSAVVH AINSQQGGRQ MLDRHWRSWR DTLEGVLQST 600
PGNQSAGGIQ SCIRDALRYN GCLTKYSIFV FWIYQGNLAD GRGAGGEDPV GAVHSEENNA 660
AFQLEDGTAA SLEANKAVCH KALFDILISE KFAMLCDLLA ATFHVNTPDD VIGLQIIDAK 720
MRNGDYAQNP ALLDHDIKKI WKKIEHVGQQ MAGLASSLSL ISQASHQKQA SGVSEIDVAE 780
HRIEETSLVG VAHKALRELT PPCDSGHSTI PNGPDGICKD CGRKADSGGR IICDRCEATY 840
HVSCLKLAID EEAPAKWYCP TCVGLDGPSK NDNNGRSHEG CDVCEWLVFE KPEEPAEDVS 900
QPELAVKTQE SSVSSMDEDS EPDLSTTALA NLCKHCGTCE DENKKFLVCG HPYCSYKFYH 960
VLCMKESQIA SEKQKKQACW YCPSCLCRCC FKNKDDEEIV LCDGCDDAYH IYCTVPPLDS 1020
VPRGNWYCMS CNARRSARGM QKYEESILQ 1049
Nucleotide Sequence
(Fasta)		GACGGCGCCG ACCTCATCCT CTCGCTCCCG GAGGACGTGC TGGCGCTCAT CTCGGCGCAC 60
CTCCGTCCCC GCGACCTCCT GGCGCTCTCC GCCGCGTCGC GCCGCCTCCG CCGCGCGCTC 120
TCCGCCGACA AGGCGTGGCT GGCGCAGTGC CGCCGCCTGC TGCCATCCCC GGCGCACCTC 180
CTGGCCTGGC GCGCCGCCGC CGCGGGCGAC TCCCTCGCCG TCTGCCGCTT CCTCCACTCC 240
GCCGCGCCGC TGCTCGGACT CTGGGCGCAC CAGAACCCCG AGCTCGGCAA CCTCGTCGCC 300
GCAGTCCCCG GATTCCTCTC CGTCGTCGCC GCACGCGCCA TCCCGCAGGA GCTCTCCCCG 360
CGCCTCCGCT GGGCGCCCGT CTTCGAGCTC CTCGCTGACG ACCACGGCCG CCCCGCGCTC 420
CTCTTCCTCC ACGGCCACCA CCACGCACAC CTCTTCCCTG GCCTCCTCGC TTCACTCCAG 480
CCCCACGCCA ACGTCATCTT CCTCGAGGCG CACACCGCCC GCTTCGCCCG CCTCTCCTTC 540
GGCGACCGCC GCCGCCTGCT CGACTCCCTC GTCGCCGCCT GCCGGATCAC GCTGCCGCCC 600
GACCTCGTCG ACGCCCCGCT CTTCGCGTGC TCCGACGACG ACCTCCCGCT GCTCGCCAAG 660
CGCCGGGAGG CCATGCTGCG CCTGCACAGG GAGGCCGCCG GGGGCATGGT GCGCACGCCC 720
GAGGTCCAGG GGCTCCTTCT GGAAGCCAAG AAGAAGGCGG CGACGACGCC GTCGCCGACC 780
GACGGTGGGC GCAGGATTCC GCTGCGGAGG AGCCTCTCAG CCGTGGCCGG GTATTTCAGG 840
AACGGCCTGC GGCAGATGAC GCCCATGCCG GGAAGGGAGT ACGCCGGCCT GTGGGGAGGC 900
ACATTCGGAT GGCCGCCAGG GCGGCCAAGC GATGAATGCA AGCCCAAGAA GGCTCTCTTC 960
TTCCTGCTCC TCTCATATGA GGAGGACAGT GAGGGCAAGC TTCAGCTGAT CGCGACCAAG 1020
GTGTTGGAGG GAACACACTA TGTTGTCCAT CCCAATGGGT CTTCGATGTT TATCGCGAGG 1080
ATGGGTGAGC AATCAACAGA GCCTTTTCCA TGGCAGACTG ATGGGGAGTC CCGAAATGTT 1140
GATGTCGAGA GAGGCTTCGC GGGAGAGGGC ATTGCAAATG GGTATGGCTT CAGATACCCT 1200
GGCTCAAAGC CTGGTTCATT GTTTGTCCTC CAGGATGGGT TGCTTGCATT TGTTTGGAAA 1260
GAGACCGGGG CCGTGCTTAC CTTGCAAAGA CTGGATTTGG AGGAGTTGCT GAAGAAAGGG 1320
GAGCGTGTGC CTGCATTGCA GCCAGTACCA AACTTTGCTT ACCTGACAAA GTCTTACTCC 1380
AATGTTTTCA CTGGTTTCCC TGGCAGCTCA GCTTCTCCCA GGTCAAAACA TTTAAATTAT 1440
ATGCCTTTTT CAGTGGTGTT TAAGGTGCAG AGGTTCATTC ACCATCGGCA GTGGTACACG 1500
TCGTCTAGAC AAACCTCAAC TCAATGGTGG CAGAGCATTA ATGAACCTCA ATCCGATCCT 1560
ATGACAATAG AGCCCACTCG TCTTCTTGGG CGTGCACACG TCTTCTTGGG TGCCGAATTA 1620
TTGGTCAGTC ATGGCATTTG CTTCTCGAGA TTTGTCATTT ATTCCCCTGT TTCCTCCCCT 1680
GGGCAGAATA AGATGAGCGC GGTGGTGCAC GCCATCAATT CCCAGCAAGG TGGGCGCCAA 1740
ATGCTAGACA GGCACTGGAG AAGCTGGAGG GACACGCTGG AGGGCGTCCT GCAATCCACT 1800
CCTGGGAACC AGAGCGCCGG AGGGATTCAG AGCTGCATCC GAGATGCGCT CAGATATAAT 1860
GGTTGCCTAA CAAAATATTC TATTTTTGTT TTCTGGATCT ACCAGGGGAA CTTAGCTGAT 1920
GGCCGAGGAG CAGGCGGAGA GGACCCTGTT GGAGCTGTAC ATTCTGAAGA GAATAATGCT 1980
GCCTTTCAGT TAGAAGATGG AACGGCTGCA TCTTTGGAAG CCAACAAGGC AGTGTGCCAT 2040
AAAGCTCTTT TTGACATTCT AATCTCCGAG AAGTTTGCCA TGCTTTGTGA TCTGCTAGCT 2100
GCAACATTCC ATGTCAATAC GCCTGATGAC GTGATTGGCT TGCAAATAAT TGATGCCAAG 2160
ATGAGAAATG GGGATTATGC ACAGAACCCT GCGCTGCTTG ACCATGATAT CAAAAAGATA 2220
TGGAAGAAGA TTGAACATGT TGGCCAACAA ATGGCTGGTC TGGCAAGCAG TCTCTCACTG 2280
ATTTCACAAG CTTCTCATCA AAAGCAGGCT TCTGGCGTTT CAGAAATTGA TGTGGCTGAA 2340
CACAGGATAG AGGAAACAAG TTTGGTTGGT GTTGCCCACA AAGCCCTAAG GGAGTTGACT 2400
CCCCCTTGCG ATTCTGGCCA TTCTACGATA CCAAATGGAC CGGATGGAAT TTGCAAGGAT 2460
TGTGGCAGAA AGGCAGACAG CGGAGGAAGA ATTATCTGTG ATAGATGTGA AGCCACATAC 2520
CATGTTTCAT GTCTCAAGCT TGCCATTGAT GAAGAGGCCC CAGCAAAATG GTACTGTCCC 2580
ACCTGTGTTG GATTAGATGG ACCTTCAAAG AATGACAACA ATGGCAGATC ACATGAAGGC 2640
TGCGATGTAT GCGAGTGGCT TGTGTTCGAG AAACCTGAAG AACCGGCTGA GGATGTTAGC 2700
CAACCTGAAT TGGCCGTCAA AACACAGGAG AGCTCAGTGT CAAGCATGGA TGAAGATAGT 2760
GAACCAGACC TCTCAACAAC TGCTCTAGCA AACTTGTGCA AGCATTGTGG CACATGTGAA 2820
GATGAGAACA AGAAGTTCTT GGTATGCGGC CATCCTTATT GTTCTTACAA GTTCTATCAT 2880
GTGCTGTGCA TGAAAGAAAG CCAGATTGCA AGTGAGAAGC AGAAGAAGCA AGCATGCTGG 2940
TACTGCCCGT CTTGCCTGTG CAGATGCTGC TTCAAGAACA AGGATGATGA AGAAATAGTA 3000
TTGTGTGATG GCTGTGATGA TGCTTATCAC ATTTACTGCA CTGTCCCGCC GCTCGATTCT 3060
GTCCCGAGAG GTAACTGGTA CTGCATGTCA TGTAATGCAC GGAGGTCAGC GCGTGGGATG 3120
CAGAAGTACG AGGAGTCAAT CCTGCAG 3148
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0027 GRMZM2G039895_P01 Zea mays 79 0.0 741
WERAM-Sei-0044 Si013357m Setaria italica 72 0.0 687
WERAM-Brd-0071 BRADI3G13210.1 Brachypodium distachyon 54 8e-139 492
WERAM-Hov-0009 MLOC_11874.1 Hordeum vulgare 51 2e-132 471
WERAM-Orp-0081 OPUNC08G00430.1 Oryza punctata 52 5e-129 459
WERAM-Orm-0080 OMERI08G00680.1 Oryza meridionalis 51 2e-127 454
WERAM-Orl-0066 KN539407.1_FGP010 Oryza longistaminata 51 3e-126 451
WERAM-Orbr-0092 OB08G10470.1 Oryza brachyantha 53 6e-125 446
WERAM-Orb-0085 OBART08G00380.1 Oryza barthii 52 1e-124 445
WERAM-Orgl-0082 OGLUM08G00440.1 Oryza glumaepatula 52 2e-124 444
WERAM-Orni-0083 ONIVA08G00360.1 Oryza nivara 52 5e-124 443
WERAM-Ori-0094 BGIOSGA027795-PA Oryza indica 52 1e-123 442
WERAM-Ors-0076 OS08T0105000-01 Oryza sativa 51 5e-123 439
WERAM-Orr-0088 ORUFI08G00420.1 Oryza rufipogon 51 5e-123 439
WERAM-Tru-0061 TRIUR3_24956-P1 Triticum urartu 53 3e-115 414
WERAM-Aet-0047 EMT19108 Aegilops tauschii 53 1e-113 409
WERAM-Lep-0084 LPERR08G00500.1 Leersia perrieri 51 2e-113 408
WERAM-Tra-0284 Traes_7AL_41A929C0D.1 Triticum aestivum 54 4e-103 373
WERAM-Mua-0027 GSMUA_Achr11P18730_001 Musa acuminata 48 5e-86 317
WERAM-Thc-0098 EOY16466 Theobroma cacao 34 9e-62 236
WERAM-Prp-0045 EMJ26345 Prunus persica 31 3e-59 228
WERAM-Pot-0025 POPTR_0002s07740.1 Populus trichocarpa 34 6e-57 220
WERAM-Met-0070 KEH35359 Medicago truncatula 30 2e-53 209
WERAM-Glm-0157 GLYMA13G09495.1 Glycine max 31 9e-53 206
WERAM-Viv-0110 VIT_18s0001g01580.t01 Vitis vinifera 33 1e-52 206
WERAM-Sol-0066 Solyc04g058190.2.1 Solanum lycopersicum 30 3e-52 204
WERAM-Art-0031 AT1G77250.1 Arabidopsis thaliana 32 2e-49 195
WERAM-Arl-0020 fgenesh1_pg.C_scaffold_2001986 Arabidopsis lyrata 31 6e-49 193
WERAM-Brr-0079 Bra015682.1-P Brassica rapa 35 4e-48 191
WERAM-Org-0006 ORGLA01G0155400.1 Oryza glaberrima 39 2e-47 189
WERAM-Bro-0119 Bo6g121200.1 Brassica oleracea 34 3e-45 181
WERAM-Amt-0050 ERN13236 Amborella trichopoda 31 5e-40 164
WERAM-Sot-0052 PGSC0003DMT400046397 Solanum tuberosum 34 1e-24 112
WERAM-Php-0045 PP1S200_118V6.1 Physcomitrella patens 62 1e-13 76.3
WERAM-Dan-0166 ENSDNOP00000021359.1 Dasypus novemcinctus 31 9e-13 73.9
WERAM-Orc-0058 ENSOCUP00000005384.2 Oryctolagus cuniculus 32 1e-12 73.6
WERAM-Ran-0263 ENSRNOP00000069442.1 Rattus norvegicus 31 1e-12 73.2
WERAM-Gaa-0127 ENSGACP00000016095.1 Gasterosteus aculeatus 56 2e-12 72.4
WERAM-Myl-0127 ENSMLUP00000010258.2 Myotis lucifugus 35 3e-12 72.0
WERAM-Ict-0043 ENSSTOP00000003541.2 Ictidomys tridecemlineatus 30 3e-12 72.0
WERAM-Ocp-0133 ENSOPRP00000014011.2 Ochotona princeps 33 3e-12 72.0
WERAM-Miv-0035 MVLG_05264T0 Microbotryum violaceum 32 4e-12 71.6
WERAM-Xim-0135 ENSXMAP00000011152.1 Xiphophorus maculatus 37 4e-12 71.6
WERAM-Mum-0185 ENSMUSP00000135941.2 Mus musculus 31 4e-12 71.6
WERAM-Nol-0193 ENSNLEP00000021682.1 Nomascus leucogenys 34 5e-12 71.2
WERAM-Cap-0033 ENSCPOP00000002700.2 Cavia porcellus 31 5e-12 71.2
WERAM-Pat-0041 ENSPTRP00000041051.3 Pan troglodytes 34 5e-12 71.2
WERAM-Paa-0006 ENSPANP00000012073.1 Papio anubis 34 6e-12 71.2
WERAM-Ova-0206 ENSOARP00000020382.1 Ovis aries 34 6e-12 71.2
WERAM-Fia-0003 ENSFALP00000000206.1 Ficedula albicollis 33 6e-12 71.2
WERAM-Poa-0043 ENSPPYP00000005112.2 Pongo abelii 34 6e-12 71.2
WERAM-Hos-0186 ENSP00000301067.7 Homo sapiens 34 6e-12 71.2
WERAM-Bot-0131 ENSBTAP00000019193.5 Bos taurus 34 6e-12 70.9
WERAM-Fec-0002 ENSFCAP00000000087.3 Felis catus 34 6e-12 70.9
WERAM-Aim-0081 ENSAMEP00000007326.1 Ailuropoda melanoleuca 34 6e-12 70.9
WERAM-Gog-0092 ENSGGOP00000007801.2 Gorilla gorilla 34 6e-12 70.9
WERAM-Drm-0094 FBpp0072043 Drosophila melanogaster 34 6e-12 70.9
WERAM-Caf-0097 ENSCAFP00000012833.4 Canis familiaris 34 6e-12 70.9
WERAM-Gam-0221 ENSGMOP00000021154.1 Gadus morhua 43 6e-12 70.9
WERAM-Mup-0167 ENSMPUP00000014520.1 Mustela putorius furo 34 7e-12 70.9
WERAM-Otg-0138 ENSOGAP00000012066.2 Otolemur garnettii 34 7e-12 70.9
WERAM-Orn-0204 ENSONIP00000021218.1 Oreochromis niloticus 45 7e-12 70.9
WERAM-Dar-0014 ENSDARP00000110667.2 Danio rerio 41 7e-12 70.9
WERAM-Chs-0070 ENSCSAP00000002475.1 Chlorocebus sabaeus 34 7e-12 70.9
WERAM-Mim-0155 ENSMICP00000015981.1 Microcebus murinus 34 8e-12 70.9
WERAM-Tar-0144 ENSTRUP00000031120.1 Takifugu rubripes 37 9e-12 70.5
WERAM-Pof-0076 ENSPFOP00000007738.1 Poecilia formosa 37 1e-11 70.1
WERAM-Vip-0013 ENSVPAP00000001498.1 Vicugna pacos 33 1e-11 70.1
WERAM-Anc-0164 ENSACAP00000015233.2 Anolis carolinensis 33 1e-11 70.1
WERAM-Ten-0151 ENSTNIP00000000510.1 Tetraodon nigroviridis 43 1e-11 69.7
WERAM-Cis-0007 ENSCSAVP00000000871.1 Ciona savignyi 46 2e-11 69.7
WERAM-Dio-0006 ENSDORP00000000973.1 Dipodomys ordii 47 2e-11 69.3
WERAM-Eqc-0209 ENSECAP00000022585.1 Equus caballus 47 2e-11 69.3
WERAM-Mae-0078 ENSMEUP00000007759.1 Macropus eugenii 47 2e-11 68.9
WERAM-Mam-0144 ENSMMUP00000020643.2 Macaca mulatta 32 2e-11 68.9
WERAM-Leo-0127 ENSLOCP00000015481.1 Lepisosteus oculatus 37 2e-11 68.9
WERAM-Prc-0127 ENSPCAP00000011494.1 Procavia capensis 47 2e-11 68.9
WERAM-Tut-0063 ENSTTRP00000004859.1 Tursiops truncatus 47 3e-11 68.9
WERAM-Sus-0005 ENSSSCP00000000202.2 Sus scrofa 32 3e-11 68.9
WERAM-Loa-0084 ENSLAFP00000006640.4 Loxodonta africana 37 3e-11 68.9
WERAM-Mod-0077 ENSMODP00000012203.3 Monodelphis domestica 47 3e-11 68.6
WERAM-Ora-0111 ENSOANP00000021438.1 Ornithorhynchus anatinus 47 3e-11 68.6
WERAM-Caj-0209 ENSCJAP00000036628.3 Callithrix jacchus 37 4e-11 68.6
WERAM-Meg-0048 ENSMGAP00000004625.2 Meleagris gallopavo 37 4e-11 68.6
WERAM-Tag-0008 ENSTGUP00000000641.1 Taeniopygia guttata 37 4e-11 68.6
WERAM-Ere-0114 ENSEEUP00000012051.1 Erinaceus europaeus 50 4e-11 68.6
WERAM-Gaga-0065 ENSGALP00000010110.4 Gallus gallus 37 4e-11 68.6
WERAM-Anp-0025 ENSAPLP00000003226.1 Anas platyrhynchos 37 4e-11 68.2
WERAM-Sah-0130 ENSSHAP00000013860.1 Sarcophilus harrisii 33 4e-11 68.2
WERAM-Ptv-0041 ENSPVAP00000004453.1 Pteropus vampyrus 47 4e-11 68.2
WERAM-Ect-0018 ENSETEP00000001138.1 Echinops telfairi 33 4e-11 68.2
WERAM-Orla-0162 ENSORLP00000018794.1 Oryzias latipes 43 4e-11 68.2
WERAM-Lac-0079 ENSLACP00000010253.1 Latimeria chalumnae 37 5e-11 67.8
WERAM-Tub-0140 ENSTBEP00000015071.1 Tupaia belangeri 50 5e-11 67.8
WERAM-Tas-0126 ENSTSYP00000013377.1 Tarsius syrichta 37 5e-11 67.8
WERAM-Cii-0031 ENSCINP00000012442.3 Ciona intestinalis 42 5e-11 67.8
WERAM-Xet-0082 ENSXETP00000026890.3 Xenopus tropicalis 45 5e-11 67.8
WERAM-Soa-0006 ENSSARP00000000495.1 Sorex araneus 50 6e-11 67.8
WERAM-Asm-0140 ENSAMXP00000013406.1 Astyanax mexicanus 31 7e-11 67.4
Created Date 25-Jun-2016