WERAM Information

Tag Content
WERAM ID WERAM-Brr-0055
Ensembl Protein ID Bra010170.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra010170 Bra010170.1 Bra010170.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.10e-08 36.1 76 161
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt  13 geke...mvqCdeCddwfHlkCvklplsslpegks...wyCpsC 50 
                    ++k+   ++ Cd+C+ +fH++C++l   slp++ +   + C  C
  Bra010170.1-P  76 NKKCekgLFLCDGCPSAFHYTCLGLL--SLPKE-KlcfYPCCCC 116
                    4444555999****************..99988.4365768887 PP
        PHD.txt   3 iClvCg..kddegekemvqCdeCddwfHlkCvklplsslpegkswyCps 49 
                    +C vCg  +++ + ++++ C++C++ fHlkC+k     +++   w+C +
  Bra010170.1-P 115 CCNVCGsiETSGN-NKLMTCEQCQRRFHLKCLKQDPCLVSYR-GWFCSR 161
                    7888955544444.45*******************8888877.8***75 PP
Protein Sequence
(Fasta)		MKRVKNCYST TAFHKEKTCS FKIVLNTDVS NQQQKKRRKT TMVGFDSSAP GEDKIEIRAR 60
TWKSLNKVLQ VMEEKNKKCE KGLFLCDGCP SAFHYTCLGL LSLPKEKLCF YPCCCCNVCG 120
SIETSGNNKL MTCEQCQRRF HLKCLKQDPC LVSYRGWFCS RQCSRVTSAL QSLVGHKIEV 180
GNEEDLVWTL MRAPNEDEHY DNEQVSKLGS AVKILHQGFE PTKDPLSGRD LVEELIFKKD 240
GVGVGRGLYT VMIEKNNEPI TVAAVRVEKN VAEISLVGEG GCVEC 285
Nucleotide Sequence
(Fasta)		ATGAAGAGAG TGAAGAATTG TTACAGCACG ACTGCGTTTC ACAAAGAGAA GACTTGTTCC 60
TTCAAAATCG TACTCAATAC TGATGTGTCA AATCAGCAAC AGAAGAAGAG AAGGAAGACG 120
ACGATGGTTG GATTTGATAG TTCGGCTCCG GGTGAAGATA AGATTGAGAT AAGGGCAAGG 180
ACATGGAAGT CGCTGAACAA AGTCTTGCAA GTGATGGAGG AGAAGAACAA GAAGTGTGAA 240
AAAGGATTGT TTCTATGCGA CGGTTGTCCA TCAGCATTTC ACTATACTTG CCTCGGATTA 300
TTGAGTCTTC CCAAGGAAAA GCTATGTTTC TATCCTTGTT GCTGCTGCAA TGTATGTGGA 360
TCAATAGAGA CATCAGGAAA CAACAAGTTG ATGACTTGTG AGCAGTGCCA AAGAAGGTTC 420
CATCTCAAGT GTTTAAAGCA AGATCCCTGT CTTGTTTCAT ACAGAGGCTG GTTCTGTAGT 480
CGTCAATGCA GCAGAGTCAC TTCCGCGCTT CAGAGTCTCG TAGGACATAA GATTGAAGTT 540
GGCAACGAGG AGGATTTGGT TTGGACACTG ATGAGAGCTC CAAATGAGGA TGAACACTAT 600
GATAATGAAC AGGTCTCAAA GCTAGGTTCT GCTGTTAAGA TACTTCACCA AGGGTTTGAG 660
CCTACAAAAG ATCCTCTCTC CGGGAGAGAC CTTGTTGAGG AACTGATATT CAAGAAAGAC 720
GGTGTAGGCG TTGGTCGAGG GCTCTACACG GTTATGATCG AGAAGAACAA CGAACCAATC 780
ACGGTGGCTG CAGTGAGAGT TGAAAAGAAT GTAGCTGAGA TCTCTTTGGT GGGAGAGGGG 840
GGATGTGTAG AGTGCTAA 859
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0150 AT5G63900.1 Arabidopsis thaliana 59 4e-86 315
WERAM-Glm-0132 GLYMA11G27510.1 Glycine max 41 8e-38 154
WERAM-Thc-0092 EOY15721 Theobroma cacao 42 1e-35 147
WERAM-Met-0133 AES98667 Medicago truncatula 38 8e-34 141
WERAM-Prp-0127 EMJ08257 Prunus persica 37 4e-33 139
WERAM-Arl-0028 fgenesh1_pg.C_scaffold_8001866 Arabidopsis lyrata 40 3e-32 135
WERAM-Sol-0044 Solyc03g071550.1.1 Solanum lycopersicum 35 1e-30 130
WERAM-Sot-0068 PGSC0003DMT400056775 Solanum tuberosum 35 2e-30 130
WERAM-Pot-0028 POPTR_0002s11940.1 Populus trichocarpa 36 2e-28 123
WERAM-Amt-0093 ERN04860 Amborella trichopoda 37 1e-27 120
WERAM-Sem-0001 EFJ24916 Selaginella moellendorffii 31 4e-27 119
WERAM-Tra-0147 Traes_4BL_F428A5CDC.1 Triticum aestivum 35 1e-25 114
WERAM-Mua-0147 GSMUA_AchrUn_randomP01500_001 Musa acuminata 35 2e-25 113
WERAM-Sob-0012 Sb01g038485.1 Sorghum bicolor 33 2e-25 113
WERAM-Aet-0069 EMT23788 Aegilops tauschii 34 3e-25 112
WERAM-Sei-0122 Si032140m Setaria italica 34 9e-25 111
WERAM-Tru-0037 TRIUR3_18780-P1 Triticum urartu 33 5e-24 108
WERAM-Viv-0120 VIT_19s0014g01500.t01 Vitis vinifera 32 6e-24 108
WERAM-Orm-0079 OMERI07G23850.1 Oryza meridionalis 32 4e-22 102
WERAM-Orgl-0081 OGLUM07G27340.1 Oryza glumaepatula 33 3e-21 99.8
WERAM-Zem-0139 GRMZM2G434715_P01 Zea mays 30 5e-21 99.0
WERAM-Orb-0084 OBART07G27320.1 Oryza barthii 32 8e-21 98.2
WERAM-Org-0083 ORGLA07G0217500.1 Oryza glaberrima 32 1e-20 97.8
WERAM-Orr-0087 ORUFI07G28300.1 Oryza rufipogon 32 7e-20 95.1
WERAM-Brd-0130 BRADI5G27517.1 Brachypodium distachyon 28 4e-19 92.4
WERAM-Orbr-0058 OB04G37750.1 Oryza brachyantha 29 7e-19 91.7
WERAM-Ors-0046 OS04T0691700-01 Oryza sativa 29 2e-18 90.1
WERAM-Bro-0100 Bo5g127560.1 Brassica oleracea 31 3e-18 89.7
WERAM-Php-0118 PP1S59_348V6.1 Physcomitrella patens 27 2e-17 87.4
WERAM-Hov-0067 MLOC_58085.2 Hordeum vulgare 36 1e-16 84.7
WERAM-Orni-0045 ONIVA04G29920.1 Oryza nivara 28 1e-16 84.3
WERAM-Orl-0058 KN539151.1_FGP008 Oryza longistaminata 28 1e-16 84.3
WERAM-Lep-0071 LPERR07G04130.1 Leersia perrieri 30 1e-16 84.0
WERAM-Ori-0046 BGIOSGA014033-PA Oryza indica 29 1e-16 84.0
WERAM-Orp-0069 OPUNC07G04530.3 Oryza punctata 29 3e-14 76.6
WERAM-Drm-0094 FBpp0072043 Drosophila melanogaster 35 4e-08 55.8
WERAM-Ora-0001 ENSOANP00000000271.1 Ornithorhynchus anatinus 28 1e-06 51.2
WERAM-Vip-0013 ENSVPAP00000001498.1 Vicugna pacos 31 2e-06 50.4
WERAM-Fia-0003 ENSFALP00000000206.1 Ficedula albicollis 30 2e-06 50.4
WERAM-Leo-0073 ENSLOCP00000009304.1 Lepisosteus oculatus 30 4e-06 49.3
WERAM-Ict-0043 ENSSTOP00000003541.2 Ictidomys tridecemlineatus 31 6e-06 48.9
WERAM-Orc-0058 ENSOCUP00000005384.2 Oryctolagus cuniculus 32 7e-06 48.5
WERAM-Aim-0081 ENSAMEP00000007326.1 Ailuropoda melanoleuca 31 8e-06 48.5
WERAM-Otg-0138 ENSOGAP00000012066.2 Otolemur garnettii 30 8e-06 48.5
WERAM-Poa-0043 ENSPPYP00000005112.2 Pongo abelii 31 8e-06 48.1
WERAM-Pat-0041 ENSPTRP00000041051.3 Pan troglodytes 31 8e-06 48.1
WERAM-Nol-0193 ENSNLEP00000021682.1 Nomascus leucogenys 31 8e-06 48.1
WERAM-Fec-0002 ENSFCAP00000000087.3 Felis catus 32 9e-06 48.1
WERAM-Dan-0166 ENSDNOP00000021359.1 Dasypus novemcinctus 32 9e-06 48.1
WERAM-Caf-0097 ENSCAFP00000012833.4 Canis familiaris 32 9e-06 48.1
WERAM-Paa-0006 ENSPANP00000012073.1 Papio anubis 32 9e-06 48.1
WERAM-Myl-0127 ENSMLUP00000010258.2 Myotis lucifugus 32 9e-06 48.1
WERAM-Mup-0167 ENSMPUP00000014520.1 Mustela putorius furo 32 9e-06 48.1
WERAM-Hos-0186 ENSP00000301067.7 Homo sapiens 32 9e-06 48.1
WERAM-Gog-0092 ENSGGOP00000007801.2 Gorilla gorilla 32 9e-06 48.1
WERAM-Mim-0155 ENSMICP00000015981.1 Microcebus murinus 32 9e-06 48.1
WERAM-Bot-0131 ENSBTAP00000019193.5 Bos taurus 32 1e-05 48.1
WERAM-Chs-0070 ENSCSAP00000002475.1 Chlorocebus sabaeus 32 1e-05 48.1
WERAM-Ova-0206 ENSOARP00000020382.1 Ovis aries 32 1e-05 48.1
Created Date 25-Jun-2016