WERAM Information

Tag Content
WERAM ID WERAM-Ori-0044
Ensembl Protein ID BGIOSGA012969-PA
Gene Name OsI_12247
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
BGIOSGA012969 BGIOSGA012969-TA BGIOSGA012969-PA
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 4.80e-07 30.6 48 94
Organism Oryza indica
Domain Profile
  HDAC Class-I
       class-1.txt  89 gedcPvfdglfeycqlit 106
                       ++dcP fd l++yc++++
  BGIOSGA012969-PA  48 DDDCPAFDRLWKYCRAYA 65 
                       68************9986 PP
       class-1.txt 145 vnDivlailellkkhkrvlyididlhhGD 173
                       vnDivl i e+l +++ v+y+did h  +
  BGIOSGA012969-PA  66 VNDIVLPINEFLGSFRCVIYVDIDWHRDN 94 
                       9***********************99755 PP
Protein Sequence
(Fasta)		MAHSLVGFYG MLGDMRRLRD LIPESYVNDA ALRQKGEDDH GIGLLSGDDD CPAFDRLWKY 60
CRAYAVNDIV LPINEFLGSF RCVIYVDIDW HRDNSFRRAE CLRGLLAAKK SVAPLI 116
Nucleotide Sequence
(Fasta)		ATGGCGCATA GCCTCGTCGG CTTCTATGGC ATGCTCGGTG ACATGCGCCG CCTCCGCGAC 60
CTCATCCCGG AGAGCTACGT CAACGATGCC GCGCTTCGGC AGAAGGGGGA GGATGACCAC 120
GGCATCGGTT TACTCAGTGG CGATGATGAT TGCCCCGCCT TCGACCGCCT CTGGAAGTAC 180
TGCCGCGCCT ACGCCGTCAA TGACATCGTG CTCCCTATAA ACGAGTTCCT CGGCAGCTTC 240
AGGTGCGTCA TCTATGTCGA CATTGACTGG CACCGCGACA ACAGCTTCAG GCGCGCAGAG 300
TGCCTTCGTG GACTCCTAGC AGCCAAGAAG TCGGTGGCCC CATTGATTTG A 352
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orm-0041 OMERI03G20880.1 Oryza meridionalis 65 4e-41 162
WERAM-Orp-0105 OPUNC11G05960.1 Oryza punctata 50 1e-32 134
WERAM-Orni-0113 ONIVA11G06000.1 Oryza nivara 49 3e-30 126
WERAM-Orgl-0109 OGLUM11G05650.1 Oryza glumaepatula 48 1e-29 124
WERAM-Orb-0112 OBART11G05910.1 Oryza barthii 48 6e-29 122
WERAM-Orl-0006 KN538683.1_FGP175 Oryza longistaminata 47 2e-28 120
WERAM-Ors-0100 OS11T0200000-01 Oryza sativa 47 2e-23 104
WERAM-Org-0004 ORGLA01G0068500.1 Oryza glaberrima 52 7e-23 102
WERAM-Orr-0004 ORUFI01G08450.1 Oryza rufipogon 57 6e-22 99.4
WERAM-Orbr-0119 OB11G14740.1 Oryza brachyantha 39 6e-21 95.9
WERAM-Lep-0052 LPERR05G13220.1 Leersia perrieri 37 4e-16 79.7
WERAM-Aet-0080 EMT05969 Aegilops tauschii 32 2e-11 64.7
WERAM-Mua-0048 GSMUA_Achr2P19590_001 Musa acuminata 34 2e-07 50.8
Created Date 25-Jun-2016