WERAM Information

Tag Content
WERAM ID WERAM-Viv-0057
Ensembl Protein ID VIT_08s0040g03340.t01
Gene Name VIT_08s0040g03340
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
VIT_08s0040g03340 VIT_08s0040g03340.t01 VIT_08s0040g03340.t01
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.20e-10 42 476 662
Organism Vitis vinifera
Domain Profile
  Me_Reader PHD
                PHD.txt  18 vqCdeCd 24 
                            + C++Cd
  VIT_08s0040g03340.t01 476 IVCSHCD 482
                            6688887 PP
                PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                            ++C +C  d+ +   ++ Cd+C+++fH  C++l+   lpeg +w+Cp C+e
  VIT_08s0040g03340.t01 534 DMCTLC-GDGGD---LILCDGCPRAFHPACLELQ--CLPEG-DWRCPCCVE 577
                            58999*.44444...9******************..*****.*******97 PP
                PHD.txt   4 ClvCgkddeg.eke....mvqCdeCddwfHlkCvklp....lsslpegkswy.CpsC 50 
                            C+vC+ +d+  +k+    ++ Cd+C++ fH+ C+  +    l++lp++ +w+ C  C
  VIT_08s0040g03340.t01 607 CVVCRAHDFSvSKFddrtVMLCDQCEKEFHVGCLRDSglcdLKELPKD-KWFcCDDC 662
                            9***75555532225555999**************999999*******.87725666 PP
Protein Sequence
(Fasta)		MGEGEGCLPV VKDIKVLKDG KTESENSSRM ELKRDHECIA GNIETEASPR KKPVKEALNE 60
EGCSEVSNPI LSPKYNASSV QTITSQVAEL ASTNQAVLGE ITSTSSGNSV PESLSDEEHS 120
RNGSSDGVST TQVVLEIPKH VSSTGIRKIT FKFSKSKEAY NSKLSSEPLH VLGRVGNSHS 180
YIGYPGDPGR NIASPDTGTN MRVNTCWNLE TRNLHFRAPN MELKMSKKVV PKSYPTNVKK 240
LLSTGILDGA LVKYISTSRE KELQGVIRES GYLCGCSACN FTKVLTAYEF EQHAGGRTRH 300
PNNHIYLENG KPIYSIIQQL KTAPLSDLDE VIKNIAGSSV NMECFKAWKA SFHQNNGVTE 360
ADENYHAQLL NHPQSIVSFP VQAVEDSFTG SRLPLKQKEL MKEMTQERKH AAKKPSSYIY 420
GSGLQHKKSS EGAIKKRDND LHRLLFMPNG LPDGAELAYY VKGQRILGGY KQGNGIVCSH 480
CDSEVSPSQF EAHAGWAARR QPYRHIYTSN GLTLHDIAIS LANGQNCTTG DSDDMCTLCG 540
DGGDLILCDG CPRAFHPACL ELQCLPEGDW RCPCCVENFC PDRKVARPIR IQLTRAVKAP 600
ESEIGGCVVC RAHDFSVSKF DDRTVMLCDQ CEKEFHVGCL RDSGLCDLKE LPKDKWFCCD 660
DCSRVHVALQ NLASRGPEMI PASVSSMINR KNLEKGLIDG AADDIQWCIL SGKSCYKEHL 720
PLLSRTTAIF RECFDPIVAS SGRDLIPVMV YGRNISGQEF GGMYCVVLLA KSTVVSAGLI 780
RVFGQEVAEL PIVATSKEHQ GKGFFRALFS CIEELLSSLG VKTLVLPAAE EAEAIWTNKL 840
GFQKMSEERM LKYTRELQLT IFKGTSMLEK EVPCIVE 877
Nucleotide Sequence
(Fasta)		ATGGGAGAAG GGGAAGGTTG TTTGCCAGTG GTTAAGGATA TCAAAGTGTT AAAGGATGGA 60
AAAACGGAAA GTGAAAATTC TTCTAGAATG GAATTGAAGC GGGACCATGA ATGTATTGCT 120
GGCAATATCG AAACGGAGGC TTCTCCTAGG AAGAAGCCAG TGAAAGAAGC TTTGAATGAG 180
GAAGGATGCT CAGAAGTTTC AAATCCGATT CTTTCTCCAA AATATAATGC TTCTAGCGTT 240
CAAACTATTA CGAGTCAGGT GGCTGAGTTA GCAAGCACTA ACCAAGCGGT GTTAGGTGAA 300
ATCACGTCTA CAAGTTCAGG AAATTCAGTT CCAGAGAGTT TGAGTGATGA AGAGCATAGC 360
AGAAATGGTT CATCTGATGG AGTCTCAACA ACTCAGGTTG TACTGGAAAT TCCGAAGCAT 420
GTCAGCTCTA CTGGAATCAG GAAAATTACA TTCAAGTTTA GCAAGAGCAA GGAGGCTTAT 480
AATAGTAAGC TATCTTCAGA ACCTCTGCAT GTGCTTGGTA GGGTTGGTAA TTCCCATTCA 540
TATATAGGCT ACCCCGGTGA TCCTGGACGA AACATTGCAT CACCTGATAC AGGAACAAAT 600
ATGCGTGTAA ATACATGTTG GAATCTGGAA ACCAGAAATC TTCATTTTCG TGCTCCTAAT 660
ATGGAATTGA AAATGTCGAA GAAGGTTGTC CCAAAGAGCT ACCCTACAAA TGTTAAAAAG 720
TTATTATCAA CTGGTATTCT TGATGGGGCT CTGGTAAAAT ATATTTCTAC TTCACGGGAG 780
AAAGAGCTGC AGGGAGTTAT AAGAGAAAGT GGATATTTGT GTGGCTGTTC AGCATGCAAT 840
TTCACCAAAG TTCTTACTGC CTATGAGTTT GAGCAGCATG CTGGTGGTAG AACTAGACAC 900
CCAAATAATC ACATATACCT GGAGAATGGC AAGCCAATTT ATAGTATCAT TCAACAGCTT 960
AAGACCGCCC CACTCAGTGA TCTGGATGAA GTGATAAAAA ATATTGCAGG TTCATCCGTC 1020
AATATGGAAT GCTTCAAGGC TTGGAAAGCA AGTTTTCATC AAAACAATGG AGTGACCGAA 1080
GCAGATGAAA ATTATCATGC TCAGCTCCTT AACCATCCCC AATCAATTGT AAGCTTTCCT 1140
GTTCAAGCCG TTGAAGACAG CTTTACTGGT TCGAGGTTAC CTTTGAAACA AAAAGAACTT 1200
ATGAAGGAGA TGACACAAGA GCGGAAACAT GCAGCAAAGA AGCCAAGCTC CTATATTTAT 1260
GGCTCAGGTC TTCAACACAA GAAATCAAGT GAAGGAGCCA TTAAGAAAAG GGATAATGAT 1320
CTACATCGGT TACTTTTCAT GCCAAATGGA CTCCCTGATG GGGCTGAATT AGCATACTAT 1380
GTCAAAGGCC AGAGAATACT TGGGGGTTAC AAGCAGGGCA ATGGTATAGT CTGCAGTCAC 1440
TGTGACAGTG AGGTCAGCCC TTCTCAGTTT GAAGCTCATG CTGGATGGGC TGCTAGGCGT 1500
CAACCCTATC GCCATATCTA TACTTCTAAT GGATTGACGC TTCATGATAT AGCTATATCA 1560
TTGGCAAATG GTCAAAACTG TACCACTGGC GACAGTGATG ATATGTGTAC CTTATGTGGA 1620
GATGGAGGGG ACCTGATTCT TTGTGATGGT TGTCCTCGGG CTTTTCATCC AGCTTGTTTA 1680
GAATTGCAGT GTCTCCCTGA AGGGGATTGG CGCTGTCCAT GTTGTGTTGA AAATTTTTGT 1740
CCTGATAGAA AAGTTGCAAG ACCAATTAGA ATACAGTTGA CCAGGGCTGT TAAAGCACCA 1800
GAATCTGAAA TTGGTGGTTG TGTTGTTTGC AGGGCCCATG ACTTCAGTGT CTCTAAATTT 1860
GATGATCGAA CGGTTATGCT TTGTGACCAA TGTGAAAAGG AATTCCATGT TGGTTGCTTG 1920
CGAGATAGTG GGTTGTGTGA TTTAAAAGAA CTCCCCAAGG ATAAATGGTT CTGCTGTGAT 1980
GACTGCAGTA GGGTCCATGT GGCTCTACAA AACTTGGCTT CCAGGGGACC AGAGATGATT 2040
CCAGCTTCAG TATCAAGCAT GATAAACAGG AAGAATCTGG AAAAAGGCTT AATTGATGGA 2100
GCTGCTGATG ATATTCAGTG GTGCATTTTA AGTGGAAAAA GTTGCTACAA AGAACATTTG 2160
CCGTTGCTTT CCAGGACTAC TGCAATTTTT AGAGAATGTT TTGATCCCAT AGTTGCAAGC 2220
TCTGGTCGGG ATCTAATTCC TGTTATGGTG TACGGGAGAA ACATATCTGG ACAAGAGTTC 2280
GGTGGAATGT ATTGTGTCGT TTTACTTGCA AAGTCCACTG TTGTATCTGC TGGACTTATC 2340
AGGGTTTTTG GTCAGGAGGT AGCTGAGCTA CCTATAGTGG CCACAAGTAA AGAACATCAA 2400
GGAAAAGGTT TTTTCCGAGC ACTATTCTCA TGCATTGAGG AATTGCTGAG TTCCTTGGGT 2460
GTGAAAACCC TGGTGCTTCC TGCAGCTGAG GAAGCTGAAG CAATCTGGAC GAATAAATTA 2520
GGCTTCCAAA AGATGTCTGA GGAGCGGATG TTAAAGTATA CGAGGGAACT TCAGCTGACA 2580
ATTTTCAAGG GAACATCAAT GCTAGAGAAG GAAGTGCCAT GTATTGTGGA ATAATGTCGT 2640
ACTCCATCTC TATTTGTCAG ATATCGTAGA ATTAGATTTT TCCTTTTGGT TTTGATTTTT 2700
AGTCTATATT TTTTCTTGTA ATATTGCGGC TGTTCTGTTT GGTGACCAGC AATCAGCAAT 2760
CTGATAAAAG ATAGTTTTTG TTCTTACACT AAGAGGAGAA AAAGGGAAAG AGGGAGGGGT 2820
GGGATCTGTG GAAAGAATCA GTGCATGCTG ACCTTTTATC ATGCATGCAT GATACTAGAA 2880
ATTCTTTCTC CTACAGTTTT TCCCTGTGCT TCCATTTTTT GATAGGACCT TGTAGTTCTG 2940
TTTTTGTACA TGGAAGGCCT TTTTTTTAGT TGAAAATTCA ATGTCTTGAG CCATCCCACA 3000
ACAGAGTTTT AACACAGGCT CACCATTTAT CTTATCTTGT GCTTGTTCAG AACTACAGAA 3060
GATAAAAGGC TGGAAGCCGG ATTTAGGTGT CCTACGTTCT TGAACTATTT TGTACCTTTA 3120
TGTACTATTT AAAAAACTTC CTAAAGTTCT CATTTCTC 3159
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Glm-0110 GLYMA10G05080.2 Glycine max 61 0.0 1022
WERAM-Prp-0028 EMJ08419 Prunus persica 60 0.0 1008
WERAM-Thc-0060 EOY07594 Theobroma cacao 62 0.0 989
WERAM-Sol-0129 Solyc10g084650.1.1 Solanum lycopersicum 60 0.0 967
WERAM-Met-0020 KEH42376 Medicago truncatula 57 0.0 964
WERAM-Art-0055 AT2G37520.1 Arabidopsis thaliana 55 0.0 893
WERAM-Arl-0075 fgenesh2_kg.4__ 1807__ AT2G37520.1 Arabidopsis lyrata 53 0.0 881
WERAM-Bro-0085 Bo4g187000.1 Brassica oleracea 54 0.0 861
WERAM-Brr-0089 Bra017181.1-P Brassica rapa 62 0.0 830
WERAM-Sot-0034 PGSC0003DMT400028730 Solanum tuberosum 70 0.0 668
WERAM-Mua-0153 GSMUA_AchrUn_randomP08820_001 Musa acuminata 46 6e-163 572
WERAM-Amt-0092 ERN04758 Amborella trichopoda 50 8e-145 511
WERAM-Pot-0098 POPTR_0009s00930.1 Populus trichocarpa 43 2e-144 511
WERAM-Orgl-0067 OGLUM06G29720.1 Oryza glumaepatula 42 5e-142 503
WERAM-Sei-0021 Si005834m Setaria italica 42 2e-141 500
WERAM-Lep-0068 LPERR06G23780.2 Leersia perrieri 41 7e-138 489
WERAM-Orni-0068 ONIVA06G31450.1 Oryza nivara 41 8e-134 475
WERAM-Orb-0069 OBART06G28330.1 Oryza barthii 41 1e-133 474
WERAM-Ors-0053 OS06T0101000-01 Oryza sativa 40 3e-130 463
WERAM-Orr-0058 ORUFI06G00030.1 Oryza rufipogon 40 3e-130 463
WERAM-Tra-0131 Traes_4AL_516398528.1 Triticum aestivum 40 2e-129 461
WERAM-Hov-0034 MLOC_36594.1 Hordeum vulgare 40 1e-128 458
WERAM-Zem-0076 GRMZM2G134214_P01 Zea mays 40 3e-128 457
WERAM-Orbr-0067 OB06G10140.1 Oryza brachyantha 39 6e-128 456
WERAM-Orm-0055 OMERI06G00010.1 Oryza meridionalis 39 1e-127 455
WERAM-Orp-0055 OPUNC06G00070.1 Oryza punctata 40 3e-127 453
WERAM-Php-0109 PP1S50_31V6.1 Physcomitrella patens 37 6e-120 429
WERAM-Brd-0016 BRADI1G29167.1 Brachypodium distachyon 45 3e-119 427
WERAM-Org-0067 ORGLA06G0289000.1 Oryza glaberrima 38 9e-117 419
WERAM-Orl-0030 KN538785.1_FGP006 Oryza longistaminata 39 2e-115 414
WERAM-Sob-0140 Sb10g031300.1 Sorghum bicolor 46 7e-109 392
WERAM-Tru-0001 TRIUR3_00440-P1 Triticum urartu 45 5e-107 386
WERAM-Ori-0069 BGIOSGA022119-PA Oryza indica 43 2e-85 315
WERAM-Sem-0141 EFJ30219 Selaginella moellendorffii 32 2e-46 185
WERAM-Aet-0069 EMT23788 Aegilops tauschii 30 3e-41 167
WERAM-Drm-0051 FBpp0087193 Drosophila melanogaster 24 9e-07 53.5
WERAM-Xet-0022 ENSXETP00000006377.3 Xenopus tropicalis 32 1e-06 53.1
WERAM-Orla-0187 ENSORLP00000021515.1 Oryzias latipes 31 2e-06 52.4
WERAM-Anp-0142 ENSAPLP00000015426.1 Anas platyrhynchos 33 7e-06 50.4
Created Date 25-Jun-2016