WERAM Information

Tag Content
WERAM ID WERAM-Arl-0075
Ensembl Protein ID fgenesh2_kg.4__1807__AT2G37520.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.4__1807__AT2G37520.1 fgenesh2_kg.4__1807__AT2G37520.1 fgenesh2_kg.4__1807__AT2G37520.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.70e-14 53.7 499 635
Organism Arabidopsis lyrata
Domain Profile
  Me_Reader PHD
                           PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                                       ++C +C  d+ +   ++ C +C+++fH+ C+k++  s+peg  wyC sC 
  fgenesh2_kg.4__1807__AT2G37520.1 499 DMCSIC-GDGGD---LLLCAGCPQAFHTACLKFQ--SVPEG-TWYCSSCN 541
                                       58****.44444...8******************..*****.*******7 PP
                           PHD.txt   4 ClvCgkddeg.....ekemvqCdeCddwfHlkCvklp....lsslpegkswy.CpsC 50 
                                       C++C+ +d+      +++++ Cd+C++ +H+ C+  +    l+++p++ +w+ C  C
  fgenesh2_kg.4__1807__AT2G37520.1 580 CVFCRSHDFSigkfdDRTVILCDQCEKEYHVGCLRENglcdLKEIPQE-KWFcCSDC 635
                                       99**86666544444455*****************9999999****99.87725556 PP
Protein Sequence
(Fasta)		MGEGTICLEM PMEENSSMGQ FKRERLDESN KGDHFPNKKQ AKEASNDDIT SEISNPVASP 60
VESTSLFRDV SSQPVKSGLG ECSGSDFGSE ETVSDDASVA GSSQTEQSSD VLPSRFVLEI 120
PKHLSSTGIT KITFKLSKPK KEFDDLPVIK DHTCDVGVVK MPKKIVALSY PSNVKKLLET 180
GILEGAPVKY ISTPPVRELQ GIIHSGGYLC GCTTCSFSKV LSAYEFELHA GAKTRHPNNH 240
IFLENGRAVY NIVQELKTAP RDVLEEVIRN VAGSALNEEG LQAWKGDGQQ VSNRVIACLT 300
GTISRNIPLS VIYLDPVVTY HFVLLSETDS CESCSYLGSG TGPGLDESQS LTPCSVENHY 360
FPEKTYAKDT LDEPKRIAKK LTSHVSGTGC HKKVSEGSNR KRDNDLHRLL FMPNGLPDGT 420
ELAYYVKTQK LLHGYKQGSG IVCSCCSREI SPSQFEAHAG MAARRQPYRH IFISSGLSLH 480
DIAMSLANGH VITTGDSDDM CSICGDGGDL LLCAGCPQAF HTACLKFQSV PEGTWYCSSC 540
NDGPISSKKA TATDPSGNAR PIVIRLSRVV KAPESEIGGC VFCRSHDFSI GKFDDRTVIL 600
CDQCEKEYHV GCLRENGLCD LKEIPQEKWF CCSDCSRIHT AVQNSVSCGP QTIPTPLLDM 660
ICRKDREKGI FTDNGDIVEW RILSGKSRYP EHLPLLSRAA VIFRECFDPI VAKSGRDLIP 720
VMVYGRNISG QEFGGMYCLV LIVNSLVVSA ALLRIFGQQV AELPIVATSR EYQGRGYFQG 780
LYACVENLLS SLNVENLVLP AAEEAESIWT KKFGFTKMSD QQLQEYQKEV QLTIFKGTSM 840
LEKKVPKTTS LSESTTLISS DH 862
Nucleotide Sequence
(Fasta)		AGATCTAACT CAAGTTAGTG TTAAGTGTTG TGTCTATTGT ATGCAATCGT GTTGTGATAT 60
TGAATCTATT TCTGATGGGA GAAGGAACTA TTTGTTTGGA GATGCCAATG GAAGAGAATT 120
CATCAATGGG TCAATTCAAA AGAGAGCGAC TTGATGAAAG TAATAAAGGT GATCACTTTC 180
CCAATAAGAA ACAAGCTAAA GAAGCTTCTA ACGATGACAT TACATCGGAG ATTTCAAATC 240
CCGTCGCATC TCCGGTTGAA AGCACGTCAC TTTTTCGTGA TGTCTCTAGC CAGCCGGTTA 300
AATCCGGTTT AGGTGAGTGC TCCGGAAGTG ATTTTGGTTC CGAAGAGACT GTTAGTGACG 360
ATGCATCCGT AGCAGGTAGC TCACAAACAG AGCAGTCGAG TGATGTTTTA CCATCTCGTT 420
TTGTGTTGGA GATTCCTAAG CATCTAAGCT CGACTGGGAT CACGAAAATC ACGTTTAAGT 480
TGAGTAAACC AAAGAAGGAA TTTGATGATT TGCCTGTGAT AAAGGATCAC ACTTGTGACG 540
TTGGTGTTGT GAAGATGCCG AAGAAGATTG TTGCTTTGAG CTACCCATCT AATGTGAAGA 600
AGCTATTGGA AACGGGTATA CTTGAAGGAG CTCCAGTGAA GTATATTTCA ACCCCACCGG 660
TGAGAGAGCT TCAGGGGATA ATCCATTCGG GTGGCTATTT GTGTGGCTGT ACAACTTGCA 720
GTTTCTCGAA AGTTCTAAGT GCGTATGAGT TTGAGCTGCA TGCTGGTGCA AAAACTAGAC 780
ATCCTAATAA TCACATATTT TTGGAGAATG GAAGGGCGGT TTATAACATA GTTCAAGAAC 840
TGAAGACTGC TCCTCGTGAT GTTCTCGAGG AAGTAATAAG GAATGTAGCT GGTTCTGCTC 900
TGAATGAGGA GGGCTTACAA GCTTGGAAAG GTGATGGCCA GCAAGTTTCC AACAGAGTAA 960
TAGCATGTCT GACCGGAACC ATATCACGGA ACATTCCACT GTCAGTGATA TACTTGGACC 1020
CTGTAGTGAC TTACCATTTT GTGTTACTAT CTGAAACTGA TTCCTGTGAA AGCTGCAGTT 1080
ATCTTGGTTC TGGTACTGGT CCTGGTCTTG ATGAGAGTCA GAGCCTTACT CCATGCTCTG 1140
TGGAGAACCA TTATTTTCCA GAGAAAACAT ATGCAAAGGA CACATTAGAT GAGCCGAAGC 1200
GGATAGCAAA GAAGCTTACT TCTCATGTAT CTGGTACGGG TTGCCATAAG AAAGTTTCTG 1260
AAGGAAGCAA TAGAAAGAGG GACAATGATT TACATCGGTT GCTGTTTATG CCTAATGGGC 1320
TTCCGGACGG GACTGAATTG GCTTACTATG TGAAAACGCA GAAACTACTA CATGGTTACA 1380
AGCAAGGAAG TGGTATAGTA TGTAGCTGCT GCAGCAGAGA GATTAGTCCT TCACAATTCG 1440
AAGCGCATGC TGGAATGGCT GCTAGACGAC AACCTTATCG CCATATCTTC ATCTCTTCTG 1500
GATTGTCATT GCATGATATA GCCATGTCAC TTGCCAATGG ACATGTCATT ACAACTGGTG 1560
ACAGTGATGA CATGTGTTCT ATTTGTGGGG ATGGTGGAGA TTTGCTACTT TGTGCTGGAT 1620
GTCCTCAAGC ATTTCATACA GCTTGTTTGA AATTTCAGTC TGTGCCTGAA GGTACTTGGT 1680
ACTGTTCGAG CTGCAATGAT GGACCTATCT CTAGTAAAAA GGCTACTGCT ACTGATCCTT 1740
CTGGCAACGC TAGGCCTATA GTTATAAGAC TGTCAAGAGT CGTGAAAGCA CCCGAAAGCG 1800
AAATTGGCGG CTGTGTGTTC TGCAGGTCCC ATGATTTTAG CATTGGGAAA TTTGATGATA 1860
GGACTGTTAT TCTCTGTGAC CAGTGTGAGA AAGAGTACCA TGTTGGTTGC CTGAGAGAGA 1920
ATGGGCTCTG TGATTTGAAA GAAATCCCGC AGGAGAAATG GTTCTGCTGT AGCGACTGCA 1980
GCAGGATTCA CACGGCAGTT CAGAATTCTG TTTCTTGTGG GCCACAAACT ATTCCTACAC 2040
CTTTGTTAGA CATGATATGC AGAAAAGACA GAGAAAAAGG AATATTTACC GATAATGGGG 2100
ATATAGTCGA ATGGAGAATA CTTAGTGGAA AAAGTCGATA CCCAGAGCAT CTGCCTTTGC 2160
TCTCACGAGC GGCCGTAATC TTCAGGGAGT GTTTTGATCC CATTGTTGCA AAGTCTGGCC 2220
GCGATCTCAT TCCTGTCATG GTGTATGGGA GAAATATATC TGGCCAGGAG TTTGGAGGAA 2280
TGTACTGTTT GGTCCTGATT GTAAATTCTC TTGTTGTTTC TGCTGCGCTG CTGAGGATAT 2340
TTGGTCAGCA AGTTGCTGAA CTTCCTATTG TAGCAACTAG CCGAGAGTAC CAAGGAAGGG 2400
GCTACTTCCA AGGGCTGTAT GCTTGTGTAG AGAATCTTCT TTCTTCTTTA AATGTTGAGA 2460
ACCTGGTTCT TCCGGCAGCT GAAGAAGCAG AGTCTATATG GACAAAGAAG TTTGGCTTTA 2520
CAAAGATGTC TGACCAGCAA TTGCAGGAGT ACCAAAAGGA AGTGCAGCTT ACAATATTCA 2580
AAGGAACCTC AATGCTGGAG AAGAAAGTAC CTAAGACGAC AAGTTTATCA GAATCAACAA 2640
CTCTCATCTC ATCTGATCAT TAAAAGATTC GTCAAGATTT TGGTGTCCGG ATCTTTCCTC 2700
TTCTCTGTTT TTTTGTTTTC TGGAAGATGG AGCAGTTTTT TGGTAACTTT TTTGTAATAT 2760
TTTTGAATAT AGATAGTAGG TTTACAAAGA AGTCCCAGAA CAGTTCCATG TTTTTGTATA 2820
GAGACCAATT ATCAACCAGA AAATAA 2847
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0055 AT2G37520.1 Arabidopsis thaliana 90 0.0 1477
WERAM-Bro-0085 Bo4g187000.1 Brassica oleracea 79 0.0 1244
WERAM-Brr-0089 Bra017181.1-P Brassica rapa 76 0.0 1174
WERAM-Thc-0060 EOY07594 Theobroma cacao 59 0.0 903
WERAM-Glm-0110 GLYMA10G05080.2 Glycine max 56 0.0 884
WERAM-Viv-0057 VIT_08s0040g03340.t01 Vitis vinifera 53 0.0 848
WERAM-Prp-0028 EMJ08419 Prunus persica 53 0.0 841
WERAM-Sol-0129 Solyc10g084650.1.1 Solanum lycopersicum 53 0.0 828
WERAM-Met-0020 KEH42376 Medicago truncatula 71 0.0 638
WERAM-Sot-0034 PGSC0003DMT400028730 Solanum tuberosum 64 2e-172 604
WERAM-Sei-0021 Si005834m Setaria italica 42 9e-140 495
WERAM-Pot-0098 POPTR_0009s00930.1 Populus trichocarpa 42 2e-139 494
WERAM-Orgl-0067 OGLUM06G29720.1 Oryza glumaepatula 42 2e-139 494
WERAM-Mua-0153 GSMUA_AchrUn_randomP08820_001 Musa acuminata 53 2e-133 474
WERAM-Lep-0068 LPERR06G23780.2 Leersia perrieri 41 2e-133 474
WERAM-Amt-0092 ERN04758 Amborella trichopoda 54 2e-131 467
WERAM-Orni-0068 ONIVA06G31450.1 Oryza nivara 41 3e-130 463
WERAM-Orb-0069 OBART06G28330.1 Oryza barthii 41 4e-130 463
WERAM-Tra-0282 Traes_7AL_153E1A74A.2 Triticum aestivum 40 3e-124 443
WERAM-Brd-0016 BRADI1G29167.1 Brachypodium distachyon 47 1e-115 415
WERAM-Org-0067 ORGLA06G0289000.1 Oryza glaberrima 38 4e-113 406
WERAM-Php-0096 PP1S412_30V6.1 Physcomitrella patens 37 3e-112 404
WERAM-Orl-0030 KN538785.1_FGP006 Oryza longistaminata 38 8e-111 399
WERAM-Orr-0071 ORUFI06G30250.1 Oryza rufipogon 38 2e-110 397
WERAM-Sob-0140 Sb10g031300.1 Sorghum bicolor 47 2e-109 394
WERAM-Zem-0076 GRMZM2G134214_P01 Zea mays 46 2e-107 387
WERAM-Tru-0001 TRIUR3_00440-P1 Triticum urartu 46 2e-104 377
WERAM-Orp-0055 OPUNC06G00070.1 Oryza punctata 45 9e-104 375
WERAM-Orbr-0067 OB06G10140.1 Oryza brachyantha 45 1e-103 375
WERAM-Ors-0053 OS06T0101000-01 Oryza sativa 45 1e-103 375
WERAM-Hov-0034 MLOC_36594.1 Hordeum vulgare 44 2e-101 367
WERAM-Orm-0055 OMERI06G00010.1 Oryza meridionalis 44 4e-101 367
WERAM-Ori-0069 BGIOSGA022119-PA Oryza indica 43 8e-85 312
WERAM-Aet-0069 EMT23788 Aegilops tauschii 32 5e-38 157
WERAM-Sem-0001 EFJ24916 Selaginella moellendorffii 30 7e-38 156
WERAM-Xet-0118 ENSXETP00000041129.3 Xenopus tropicalis 32 5e-06 51.2
Created Date 25-Jun-2016