WERAM Information

Tag Content
WERAM ID WERAM-Org-0067
Ensembl Protein ID ORGLA06G0289000.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ORGLA06G0289000 ORGLA06G0289000.1 ORGLA06G0289000.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 4.20e-08 34 272 603
Organism Oryza glaberrima
Domain Profile
  Me_Reader PHD
            PHD.txt   4 ClvCgkddegeke....mvqCdeCd 24 
                        C++C k+++ +      ++ Cd+C 
  ORGLA06G0289000.1 272 CQTC-KSSFATLRtgkfALLCDSCL 295
                        9999.55555333455599999996 PP
            PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                        ++C +C  +d ge  ++ Cd+C+++fH +Cv+++  ++p g  w+C+ C++
  ORGLA06G0289000.1 452 DLCSIC--SDGGE--LLLCDSCPRAFHRECVGFT--TIPRG-TWCCRYCEN 495
                        57****..44443..9******************..*****.*******86 PP
            PHD.txt  38 slpegkswyCps 49 
                         lpeg +wyC  
  ORGLA06G0289000.1 593 ALPEG-AWYCTA 603
                        67899.****74 PP
Protein Sequence
(Fasta)		MAAAAAAAAA AEDKFVLRSG VRTGLKREFA FAIASQAALS STLGRTRSSS SASATPNSKR 60
PRRPPCTPES DPPVLALRAH TPDPDPHTSP RRITRSMLLN PSAPLLHHHP KLQLQPRRFT 120
RSLLSSRTSN SSSSSPSAST STSKMELKMS KKISFTRIPR NLKDLLATGL LEGHPVKYIM 180
RKGKRAVLRG VIKRVGILCS CSSCKGRTVV SPYYFEVHAG STKKHPSDYI FLENGNNLHD 240
ILRACSDATL DMLQSAIQNA IGPAPKKRTF RCQTCKSSFA TLRTGKFALL CDSCLESKGS 300
QNSTRTSKIG RNPTSSARRS KNESPGSKYC NSSARGSKNA FPGVKTTSTG RITRKDKGLH 360
KLAFMSGVLP EGTDVGYYVG GKRLLDGYIK EFGIYCHCCN TVVSPSQFEA HAGRAARRKP 420
YHNIYMSNGV SLHELSVSLS KGRNMSNRQS DDLCSICSDG GELLLCDSCP RAFHRECVGF 480
TTIPRGTWCC RYCENRQQRE SSLAYNHNAI AAGRIDGIDP MEQIFTRSIR IATTPVTGFG 540
GCALCSMSGF MDKQSVLSRS RPDYDDELAV LDQLHDFSKK KFSARTVLLC DQALPEGAWY 600
CTADCVRISE TLKDLLSRGA EPISSVDVEI IKRKYEQKAL NKDGDLDVRW RVLKDKSSAD 660
SKLVLSKAVA IFHESFDPII QIATGRDLIP AMVYGNTVVS AGLFRVMGSE IAELPLVATS 720
RDSQGLTEQG YFQALFGCIE RLLASLKVKH FVLPAADEAE SIWTQRFGFV KITQDELREY 780
LKGGRTTVFQ GTSTLHKLVP KLDG 804
Nucleotide Sequence
(Fasta)		ATGGCGGCGG CGGCGGCGGC GGCGGCGGCG GCGGAGGACA AGTTCGTCCT GCGCTCCGGC 60
GTCCGCACCG GCCTCAAGCG CGAGTTCGCC TTCGCCATCG CCTCCCAGGC CGCCCTCTCT 120
TCCACCCTCG GCCGCACGCG CTCTTCATCC TCCGCATCTG CCACCCCCAA CTCCAAGCGC 180
CCGCGCCGCC CCCCCTGCAC GCCGGAATCG GATCCCCCCG TTCTCGCCCT CCGCGCTCAC 240
ACCCCCGACC CCGATCCCCA CACCTCGCCC AGGCGGATCA CTCGCTCCAT GCTCCTCAAC 300
CCCTCCGCCC CCCTTCTCCA CCACCACCCC AAGCTTCAGC TTCAACCCCG CCGCTTCACC 360
AGGTCACTCT TGTCGTCTCG GACTAGCAAC TCCTCCTCCT CTTCACCTTC TGCCTCCACC 420
TCCACCTCCA AGATGGAGCT CAAGATGTCC AAGAAGATTT CCTTCACTAG GATCCCCAGG 480
AACCTCAAGG ACCTGCTCGC CACTGGCTTG CTCGAGGGCC ACCCCGTCAA GTACATCATG 540
AGGAAAGGCA AGCGAGCAGT GCTTCGTGGA GTCATTAAAC GTGTCGGCAT ACTGTGCTCT 600
TGTTCCTCCT GCAAAGGACG AACCGTTGTT TCCCCTTATT ATTTCGAGGT GCATGCTGGG 660
AGTACTAAAA AGCACCCCTC CGACTACATT TTCCTAGAAA ATGGAAACAA TCTGCATGAT 720
ATATTGAGGG CGTGTTCTGA TGCTACCTTA GACATGCTGC AATCTGCAAT ACAGAATGCG 780
ATTGGCCCAG CTCCTAAGAA GAGGACATTC AGATGCCAAA CTTGCAAAAG TTCATTCGCT 840
ACCCTTCGCA CTGGGAAATT TGCTTTGTTA TGTGATTCAT GTCTTGAGTC CAAGGGATCT 900
CAAAACAGTA CCAGGACATC AAAGATTGGC CGGAATCCTA CTTCCTCTGC TAGGAGATCC 960
AAGAATGAAT CCCCAGGTTC AAAGTATTGC AATTCATCTG CTAGGGGATC CAAGAATGCA 1020
TTCCCAGGAG TGAAGACTAC TAGCACAGGA AGGATTACAA GAAAGGATAA GGGATTGCAT 1080
AAGTTGGCTT TCATGAGTGG TGTTCTGCCA GAGGGTACCG ATGTTGGCTA CTATGTTGGT 1140
GGAAAGAGGT TGTTGGATGG CTACATAAAG GAATTTGGAA TCTACTGCCA TTGCTGCAAC 1200
ACAGTGGTTA GCCCTTCGCA GTTTGAAGCC CATGCTGGCC GTGCTGCTCG ACGCAAACCG 1260
TACCACAACA TATATATGTC AAATGGTGTT TCATTACATG AACTGTCAGT TTCACTTTCA 1320
AAAGGTCGAA ATATGTCAAA CAGACAAAGT GATGACTTGT GCAGCATTTG TTCAGATGGT 1380
GGGGAGCTTC TCCTTTGTGA TTCCTGCCCA AGAGCTTTTC ACAGAGAGTG TGTTGGCTTT 1440
ACTACTATCC CAAGGGGAAC TTGGTGTTGT CGGTATTGTG AGAATAGACA ACAGAGAGAA 1500
AGTTCTTTGG CATATAACCA CAATGCAATA GCTGCTGGGA GGATTGACGG AATTGATCCA 1560
ATGGAACAAA TATTTACAAG GTCCATACGC ATTGCCACAA CACCAGTGAC TGGATTTGGT 1620
GGCTGTGCAC TGTGCAGTAT GTCAGGATTC ATGGACAAGC AGAGTGTATT AAGTCGAAGT 1680
AGGCCAGATT ATGATGATGA GCTGGCAGTA CTAGACCAGC TCCATGATTT CAGCAAAAAG 1740
AAATTCAGTG CGAGAACTGT GCTGCTCTGT GACCAAGCCT TGCCTGAGGG AGCATGGTAT 1800
TGTACTGCAG ACTGCGTTAG GATCAGCGAG ACACTGAAGG ACTTACTTAG CCGTGGAGCA 1860
GAGCCTATTT CTTCTGTAGA TGTAGAAATT ATAAAGAGGA AATATGAACA GAAAGCTCTA 1920
AATAAAGATG GAGATCTTGA TGTTAGATGG AGGGTTTTGA AGGACAAAAG TTCAGCAGAC 1980
AGTAAATTGG TTCTCTCCAA AGCAGTTGCA ATTTTCCATG AATCATTTGA TCCCATTATC 2040
CAAATTGCTA CTGGGCGAGA CCTTATTCCA GCCATGGTTT ACGGCAACAC TGTAGTATCT 2100
GCGGGTCTTT TCCGTGTTAT GGGTAGTGAA ATTGCGGAGC TACCCTTGGT TGCTACAAGT 2160
AGAGATAGTC AAGGCTTGAC TGAACAGGGG TATTTCCAAG CGCTGTTTGG CTGCATAGAA 2220
CGATTGTTGG CATCTCTGAA GGTGAAACAT TTTGTGCTGC CAGCTGCAGA TGAAGCGGAG 2280
TCTATCTGGA CACAGCGGTT TGGATTCGTG AAGATAACCC AAGACGAGCT GCGTGAGTAC 2340
CTCAAGGGTG GGCGAACAAC CGTGTTCCAG GGAACATCAA CCCTGCACAA GCTGGTCCCA 2400
AAATTGGATG GCTAG 2416
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orb-0069 OBART06G28330.1 Oryza barthii 94 0.0 1402
WERAM-Orgl-0067 OGLUM06G29720.1 Oryza glumaepatula 91 0.0 1380
WERAM-Orni-0068 ONIVA06G31450.1 Oryza nivara 94 0.0 1375
WERAM-Orr-0071 ORUFI06G30250.1 Oryza rufipogon 94 0.0 1357
WERAM-Orl-0030 KN538785.1_FGP006 Oryza longistaminata 92 0.0 1336
WERAM-Lep-0068 LPERR06G23780.2 Leersia perrieri 74 0.0 1150
WERAM-Sei-0021 Si005834m Setaria italica 73 0.0 1023
WERAM-Tra-0282 Traes_7AL_153E1A74A.2 Triticum aestivum 66 0.0 885
WERAM-Brd-0016 BRADI1G29167.1 Brachypodium distachyon 72 0.0 875
WERAM-Orbr-0077 OB06G36080.1 Oryza brachyantha 82 0.0 875
WERAM-Sob-0140 Sb10g031300.1 Sorghum bicolor 60 0.0 837
WERAM-Tru-0001 TRIUR3_00440-P1 Triticum urartu 63 0.0 827
WERAM-Mua-0153 GSMUA_AchrUn_randomP08820_001 Musa acuminata 54 0.0 819
WERAM-Ori-0062 BGIOSGA020496-PA Oryza indica 91 0.0 672
WERAM-Thc-0117 EOY33667 Theobroma cacao 46 8e-171 598
WERAM-Ors-0053 OS06T0101000-01 Oryza sativa 46 3e-166 583
WERAM-Orm-0055 OMERI06G00010.1 Oryza meridionalis 45 1e-163 574
WERAM-Hov-0034 MLOC_36594.1 Hordeum vulgare 46 3e-163 573
WERAM-Prp-0031 EMJ05208 Prunus persica 45 9e-163 571
WERAM-Pot-0098 POPTR_0009s00930.1 Populus trichocarpa 45 1e-162 571
WERAM-Zem-0076 GRMZM2G134214_P01 Zea mays 45 1e-161 568
WERAM-Glm-0253 GLYMA19G37190.2 Glycine max 44 4e-159 559
WERAM-Sol-0136 Solyc11g066480.1.1 Solanum lycopersicum 45 5e-156 549
WERAM-Art-0047 AT2G27980.1 Arabidopsis thaliana 43 2e-153 540
WERAM-Sot-0002 PGSC0003DMT400001219 Solanum tuberosum 45 6e-153 538
WERAM-Viv-0039 VIT_06s0061g00840.t01 Vitis vinifera 44 8e-153 538
WERAM-Bro-0081 Bo4g164940.1 Brassica oleracea 42 3e-151 533
WERAM-Brr-0168 Bra034381.1-P Brassica rapa 42 9e-150 528
WERAM-Arl-0074 fgenesh2_kg.4__ 1712__ AT2G36720.1 Arabidopsis lyrata 40 3e-143 506
WERAM-Met-0020 KEH42376 Medicago truncatula 40 3e-133 473
WERAM-Amt-0092 ERN04758 Amborella trichopoda 48 4e-126 449
WERAM-Orp-0055 OPUNC06G00070.1 Oryza punctata 48 2e-125 447
WERAM-Php-0096 PP1S412_30V6.1 Physcomitrella patens 33 2e-90 331
WERAM-Aet-0069 EMT23788 Aegilops tauschii 25 9e-37 152
WERAM-Sem-0141 EFJ30219 Selaginella moellendorffii 24 2e-18 92.0
WERAM-Lac-0032 ENSLACP00000005449.1 Latimeria chalumnae 36 7e-13 73.9
WERAM-Dar-0118 ENSDARP00000073773.4 Danio rerio 48 1e-11 69.3
WERAM-Leo-0045 ENSLOCP00000006489.1 Lepisosteus oculatus 57 5e-11 67.4
WERAM-Pof-0086 ENSPFOP00000007576.2 Poecilia formosa 54 8e-11 67.0
WERAM-Gaa-0005 ENSGACP00000000735.2 Gasterosteus aculeatus 39 1e-10 66.6
WERAM-Xim-0198 ENSXMAP00000015930.1 Xiphophorus maculatus 49 1e-10 66.6
WERAM-Eqc-0088 ENSECAP00000010777.1 Equus caballus 41 2e-10 65.5
WERAM-Cym-0028 CMR472CT Cyanidioschyzon merolae 39 4e-10 64.7
WERAM-Orn-0124 ENSONIP00000012427.1 Oreochromis niloticus 52 5e-10 64.3
WERAM-Dan-0008 ENSDNOP00000000927.3 Dasypus novemcinctus 35 6e-10 63.9
WERAM-Xet-0004 ENSXETP00000002259.3 Xenopus tropicalis 35 6e-10 63.9
WERAM-Aim-0121 ENSAMEP00000011418.1 Ailuropoda melanoleuca 47 8e-10 63.5
WERAM-Pes-0100 ENSPSIP00000012511.1 Pelodiscus sinensis 42 1e-09 63.2
WERAM-Caf-0120 ENSCAFP00000015791.3 Canis familiaris 47 2e-09 62.4
WERAM-Orla-0175 ENSORLP00000020378.1 Oryzias latipes 52 2e-09 62.4
WERAM-Chs-0061 ENSCSAP00000001965.1 Chlorocebus sabaeus 36 2e-09 62.0
WERAM-Asm-0214 ENSAMXP00000020556.1 Astyanax mexicanus 49 2e-09 62.0
Created Date 25-Jun-2016