WERAM Information

Tag Content
WERAM ID WERAM-Sol-0046
Ensembl Protein ID Solyc03g083240.2.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc03g083240.2 Solyc03g083240.2.1 Solyc03g083240.2.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 8.00e-67 225.7 427 728
Organism Solanum lycopersicum
Domain Profile
  HDM JHDM2
           JHDM2.txt   2 Yc.krdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvyvgilkkkwaeedlkellksieee 83 
                         Y+ +r+g lNLa+klp++ ++pdlgPk+y AyG  +e +r++++t+lh+d+sdavnil++   +k ++++ ++ e l++ +e 
  Solyc03g083240.2.1 427 YThPRKGLLNLATKLPDTALKPDLGPKTYIAYGYQEELGRGDSVTKLHCDISDAVNILTHTTKAKVDHNQREIIEKLRKQQEV 509
                         65247899****************************************************98888887777754444333332 PP
           JHDM2.txt  90 rkrvqdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlipag 176
                         ++ + + +   ga+W+if+++d++k+ e+l+++ +e+++    +v+++ +pihdq++yl++k++k+L+ee+ ve+wt+ Q lg+av+ipag
  Solyc03g083240.2.1 604 KQDCAEIEC-GGAVWDIFRRQDVPKLIEYLQRHWREFRHfnnaPVSSVIHPIHDQTFYLEEKHKKQLKEEFNVEPWTFEQYLGEAVFIPAG 693
                         566666666.8***************************99888888999****************************************** PP
           JHDM2.txt 177 apHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
                         +pHqv+n +sc+kva dFvsPEnv+ec+rlt+e+r
  Solyc03g083240.2.1 694 CPHQVRNRQSCIKVAVDFVSPENVQECIRLTEEFR 728
                         *********************************98 PP
Protein Sequence
(Fasta)		MQKETLLRRL HCKVIMNRYP DRTNDEVEDT CPFCYGNCNC GACLQKDVFL KDCCKETDEK 60
MRLEGSLYLL FNILPLLRHI QKEQRFELEV EANIRGVQLT EEDVIISAVD DDDRVYCDNC 120
NTSIVNFHRS CPNPDCSYDI CVNCCRELRD GAQHGATEVS SSLSKSVEAS RITALKGNNA 180
PDGWRSPETL LANDCPTHMS FDVAEWRAKS DGSIPCPPKE CGGCGSSLMA LRRIFEANWV 240
DQLIQSAEAL TCNYRLPDID LSHGCSFCLA TTSVQDGDNR CQVREASFRN NSHDNLLYCP 300
NAVHVDGNEF EHFQMHWRAG EPVIVRNAQA KASGLSWEPM VMWRAFRKAS KKLKEEHFSV 360
MSIDCLDWCQ VQINIHQFFK GYLEGRRHHN GWPEILKLKD WPPANTFEEC LPRHGADFFA 420
MLPFSEYTHP RKGLLNLATK LPDTALKPDL GPKTYIAYGY QEELGRGDSV TKLHCDISDA 480
VNILTHTTKA KVDHNQREII EKLRKQQEVE DSKEHCPGIA EAPDSHQRSD ETETINFYSQ 540
ESTGDNKSCL PETMDKGKDI DKGENIISER DYADISGRTS LPNEINPSTN ALALVEADVA 600
LEIKQDCAEI ECGGAVWDIF RRQDVPKLIE YLQRHWREFR HFNNAPVSSV IHPIHDQTFY 660
LEEKHKKQLK EEFNVEPWTF EQYLGEAVFI PAGCPHQVRN RQSCIKVAVD FVSPENVQEC 720
IRLTEEFRLL PKGHRSKEDI LEVKKLGLYA ASVAVDEAIN LLSKLNAPQS CDELQQQEHA 780
TGTESSIAES LDNGIHQL 798
Nucleotide Sequence
(Fasta)		ATGCAGAAGG AAACACTATT GCGACGACTG CATTGTAAAG TGATAATGAA TAGGTATCCA 60
GATAGAACAA ACGATGAAGT AGAGGACACA TGTCCTTTCT GTTATGGTAA TTGCAATTGT 120
GGAGCTTGCC TTCAAAAAGA TGTCTTCTTA AAGGACTGCT GCAAAGAAAC TGATGAAAAG 180
ATGAGATTGG AGGGTTCACT TTATTTGCTA TTCAACATTC TGCCCCTCCT CAGGCATATT 240
CAAAAAGAGC AAAGGTTTGA GCTAGAGGTT GAAGCAAACA TTCGTGGTGT TCAGCTGACA 300
GAAGAAGACG TCATCATATC AGCCGTTGAT GATGATGATA GAGTGTATTG TGATAATTGC 360
AACACATCCA TTGTCAATTT CCATAGAAGC TGCCCAAATC CTGATTGCTC TTACGATATC 420
TGTGTCAATT GTTGTCGGGA ACTCAGAGAT GGTGCCCAGC ATGGAGCTAC TGAAGTCAGC 480
TCATCTCTCA GCAAGTCGGT GGAAGCTAGT CGTATCACAG CATTGAAGGG AAACAATGCG 540
CCAGATGGCT GGAGAAGTCC AGAGACCCTC CTTGCTAATG ATTGTCCAAC TCACATGTCC 600
TTCGATGTTG CTGAGTGGAG AGCCAAATCT GATGGCAGCA TACCCTGTCC TCCTAAAGAG 660
TGTGGTGGTT GTGGTTCTTC TTTAATGGCT CTAAGGCGTA TCTTCGAAGC AAATTGGGTA 720
GACCAACTAA TTCAAAGTGC TGAGGCCTTA ACATGCAACT ACCGCCTTCC AGATATAGAT 780
TTGTCGCATG GGTGTTCATT TTGTCTTGCT ACCACTTCTG TCCAAGACGG TGATAACCGA 840
TGTCAAGTAA GAGAAGCATC TTTTAGGAAC AACAGCCATG ATAATCTTCT GTACTGTCCT 900
AATGCTGTTC ATGTTGATGG CAACGAGTTT GAGCATTTTC AAATGCATTG GAGGGCTGGT 960
GAACCTGTAA TAGTTAGAAA TGCACAAGCT AAGGCCTCTG GTCTTAGCTG GGAGCCAATG 1020
GTAATGTGGA GGGCCTTCAG AAAAGCAAGT AAAAAGCTGA AAGAGGAGCA TTTCTCTGTC 1080
ATGTCCATTG ATTGCTTGGA TTGGTGTCAG GTTCAGATAA ATATTCATCA GTTCTTCAAG 1140
GGCTACTTGG AGGGTCGCAG GCATCACAAT GGGTGGCCAG AAATTTTAAA ACTGAAGGAT 1200
TGGCCTCCGG CTAATACTTT TGAAGAATGT TTGCCGAGGC ATGGAGCTGA CTTTTTTGCT 1260
ATGCTTCCGT TTAGCGAATA CACTCATCCT AGAAAAGGTC TTCTAAATTT GGCCACTAAG 1320
CTCCCCGATA CTGCCTTGAA GCCAGACTTG GGACCTAAAA CTTATATTGC TTATGGATAT 1380
CAAGAAGAGC TTGGAAGAGG TGATTCTGTC ACTAAGTTGC ATTGTGATAT CTCTGATGCG 1440
GTCAACATAT TGACTCATAC AACCAAAGCA AAAGTTGATC ACAATCAACG TGAAATCATT 1500
GAAAAACTAA GGAAGCAACA AGAGGTTGAA GATTCAAAGG AACATTGTCC AGGCATAGCT 1560
GAGGCTCCGG ATTCTCATCA AAGATCTGAC GAAACTGAAA CTATAAACTT TTATTCTCAG 1620
GAAAGCACTG GTGATAACAA AAGTTGCTTG CCAGAAACTA TGGACAAGGG GAAAGATATT 1680
GATAAAGGAG AAAATATAAT TTCCGAAAGG GATTACGCTG ATATATCTGG CAGAACTTCT 1740
CTACCCAATG AGATAAACCC AAGTACCAAT GCCTTGGCAC TAGTGGAAGC GGATGTAGCT 1800
CTCGAAATCA AGCAAGATTG TGCAGAAATT GAATGTGGGG GTGCAGTATG GGACATCTTT 1860
CGCAGACAAG ATGTACCCAA GTTAATAGAA TACTTGCAGA GGCATTGGAG AGAATTTCGC 1920
CATTTTAACA ATGCTCCTGT GTCTTCAGTT ATTCACCCTA TCCATGATCA GACATTTTAT 1980
TTGGAGGAGA AGCATAAAAA ACAGCTGAAG GAGGAGTTCA ACGTTGAGCC ATGGACGTTT 2040
GAGCAATACC TTGGTGAAGC TGTTTTTATT CCTGCAGGAT GTCCTCATCA AGTGAGAAAT 2100
AGACAGTCAT GTATCAAGGT TGCTGTTGAC TTTGTATCCC CGGAAAATGT TCAAGAGTGT 2160
ATTCGCTTGA CGGAGGAGTT TCGCTTGCTA CCCAAAGGCC ACCGATCTAA GGAAGATATA 2220
TTGGAGGTGA AGAAGTTGGG GCTTTATGCT GCTAGTGTTG CTGTTGATGA AGCCATAAAC 2280
CTGTTGTCAA AACTTAATGC TCCTCAGTCT TGTGATGAAT TGCAACAGCA AGAACATGCT 2340
ACCGGAACTG AGAGCTCTAT TGCAGAAAGC CTGGATAATG GGATCCATCA GCTGTAGTGA 2400
CCAAGACTGA AGGCTGCTCT TGTTAAATAA TGAAGATTTT GAAGTTTTTA GAGAACATTT 2460
ATTTGATTCT AAATCTTTTG ATTGGATTGT GAGGAGGCAT TTCTGTTTTT GTATACTTTT 2520
TTTTTTCGTC TCTCCAAAAT AATAATCCTT TTGAGGCATT CTTTTAGATG TCTTTATGGC 2580
TCATTGAAGC TTGTAATGAA GTCAAGTTTA CAGGAATCGC AAG 2624
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Prp-0006 EMJ21777 Prunus persica 60 0.0 872
WERAM-Pot-0147 POPTR_0015s01510.1 Populus trichocarpa 57 0.0 848
WERAM-Met-0165 KEH24644 Medicago truncatula 53 0.0 760
WERAM-Art-0095 AT4G00990.1 Arabidopsis thaliana 50 0.0 714
WERAM-Arl-0098 fgenesh2_kg.6__ 3604__ AT4G00990.1 Arabidopsis lyrata 50 0.0 709
WERAM-Thc-0038 EOY23556 Theobroma cacao 59 0.0 641
WERAM-Viv-0103 VIT_16s0098g01830.t01 Vitis vinifera 58 0.0 634
WERAM-Glm-0118 GLYMA10G43080.2 Glycine max 47 0.0 632
WERAM-Org-0037 ORGLA03G0207400.1 Oryza glaberrima 44 6e-172 602
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 45 7e-172 601
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 45 2e-171 600
WERAM-Ori-0043 BGIOSGA012927-PA Oryza indica 44 6e-171 598
WERAM-Brd-0103 BRADI4G27417.1 Brachypodium distachyon 44 3e-170 596
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 45 2e-169 593
WERAM-Lep-0033 LPERR02G31600.1 Leersia perrieri 45 3e-169 592
WERAM-Orbr-0045 OB03G31290.1 Oryza brachyantha 44 8e-169 591
WERAM-Mua-0155 GSMUA_AchrUn_randomP11860_001 Musa acuminata 42 4e-168 589
WERAM-Sei-0128 Si034182m Setaria italica 45 2e-167 587
WERAM-Amt-0077 ERM98415 Amborella trichopoda 42 2e-165 580
WERAM-Orni-0109 ONIVA10G14230.1 Oryza nivara 44 3e-165 579
WERAM-Ors-0026 OS02T0828900-01 Oryza sativa 42 1e-163 574
WERAM-Aet-0028 EMT26740 Aegilops tauschii 43 2e-163 573
WERAM-Brr-0135 Bra027055.1-P Brassica rapa 44 2e-163 573
WERAM-Tra-0032 Traes_1DS_20D6E2B0D.1 Triticum aestivum 43 3e-163 573
WERAM-Orb-0037 OBART03G22260.1 Oryza barthii 43 2e-162 570
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 43 5e-161 565
WERAM-Orp-0036 OPUNC03G20970.1 Oryza punctata 43 1e-159 561
WERAM-Orgl-0016 OGLUM01G49660.1 Oryza glumaepatula 42 5e-159 559
WERAM-Bro-0002 Bo00957s030.1 Brassica oleracea 42 2e-157 553
WERAM-Orm-0031 OMERI02G35990.1 Oryza meridionalis 42 4e-157 553
WERAM-Sot-0039 PGSC0003DMT400035505 Solanum tuberosum 42 2e-147 520
WERAM-Orr-0028 ORUFI02G39830.1 Oryza rufipogon 40 6e-146 515
WERAM-Orl-0059 KN539156.1_FGP008 Oryza longistaminata 42 2e-141 500
WERAM-Tru-0041 TRIUR3_19822-P1 Triticum urartu 40 7e-135 479
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 33 1e-48 192
WERAM-Caj-0207 ENSCJAP00000022938.2 Callithrix jacchus 44 4e-27 120
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 46 9e-27 119
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 45 1e-26 119
WERAM-Tub-0003 ENSTBEP00000000295.1 Tupaia belangeri 49 2e-26 118
WERAM-Orla-0053 ENSORLP00000006841.1 Oryzias latipes 46 3e-26 118
WERAM-Ere-0095 ENSEEUP00000009792.1 Erinaceus europaeus 49 3e-26 118
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 49 3e-26 118
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 48 3e-26 117
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 49 3e-26 117
WERAM-Pes-0047 ENSPSIP00000007045.1 Pelodiscus sinensis 46 3e-26 117
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 49 4e-26 117
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 49 4e-26 117
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 49 4e-26 117
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 49 4e-26 117
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 49 4e-26 117
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 49 4e-26 117
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 49 4e-26 117
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 49 4e-26 117
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 48 4e-26 117
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 49 4e-26 117
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 49 4e-26 117
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 49 4e-26 117
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 49 4e-26 117
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 49 4e-26 117
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 49 4e-26 117
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 49 4e-26 117
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 49 4e-26 117
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 49 4e-26 117
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 49 4e-26 117
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 49 4e-26 117
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 49 4e-26 117
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 48 4e-26 117
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 49 4e-26 117
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 48 4e-26 117
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 48 5e-26 117
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 48 5e-26 117
WERAM-Mae-0023 ENSMEUP00000001666.1 Macropus eugenii 48 5e-26 117
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 48 5e-26 117
WERAM-Gaga-0080 ENSGALP00000012399.4 Gallus gallus 48 5e-26 117
WERAM-Tag-0001 ENSTGUP00000000018.1 Taeniopygia guttata 48 6e-26 117
WERAM-Soa-0091 ENSSARP00000008521.1 Sorex araneus 48 6e-26 117
Created Date 25-Jun-2016