WERAM Information

Tag Content
WERAM ID WERAM-Sol-0026
Ensembl Protein ID Solyc02g078790.2.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc02g078790.2 Solyc02g078790.2.1 Solyc02g078790.2.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 1.10e-45 156.6 574 843
Organism Solanum lycopersicum
Domain Profile
  HDM JHDM2
           JHDM2.txt   7 gklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvyvgilkkk.waeedlkellksieeeelde 87 
                         g lN+a klp+++++ d+gPk++  yG+ +e ++++++ nlh ++ d+v +lv++   k k w++ ++ +++k ++e + + 
  Solyc02g078790.2.1 574 GLLNVAAKLPHYSLQNDVGPKIFLSYGMYEELGKGDSVNNLHTNMRDLVFLLVHISEVKLKgWQKTKIGKMQKIFAESDHKG 655
                         779****************************************************998877699988888888887776554 PP
           JHDM2.txt  81 eeeeldevtrkrvqdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQkl 167
                          +e+l+  + +   + +++ galW++f+++d++ + e+l+ + k  g        ++  p+ d  +yl+++++++L+e +G+e+w + Q l
  Solyc02g078790.2.1 711 SHEDLNGSSLNS--SDSSHSGALWDVFRRQDVPMLIEYLRFHWKKHGDsdhvTDDSVPSPLYDGIVYLNEHHKRKLKELFGIEPWSFEQHL 799
                         555553333332..334457*******************998887776544444456689******************************* PP
           JHDM2.txt 168 gdavlipagapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
                         g+a+++pag+p qv+nl+s+v++  dF+sPE + e++r+ +e r
  Solyc02g078790.2.1 800 GEAIFVPAGCPFQVRNLQSTVQLGLDFLSPESLGEAVRMAEEIR 843
                         ************************************99998875 PP
Protein Sequence
(Fasta)		MGLLAAVQHL LTELERRRFS LLLLLLLLLA FCILQPHELQ LHVFTRYHNI GIPDDLRCKR 60
SDGKQWRCTA LSMPDKTVCE KHYIQAKKRA ANSAMRASMK KGKRKSMDEN DVYSESRSDD 120
MDITAENQKL GDYSGSFSEK KHKEKYDESR RGYRTPPPSG MESSRSRSLK MFDSSPTAGT 180
SEGSSNSSDN TGGQPCHQCR RNDHRVTWCL RCDRRGYCES CISTWYSNMP VEEIQRICPA 240
CRGSCNCKVC MRGDNLLKAR IREIPAQNKL QYLYSLLSAV LPVVKHIHNQ QCFEVELEKR 300
LRGNGMDLCR TKLNADEQMC CNFCRIPIVD YHRHCSNCSY DLCLSCCKDL RDATKLVQDD 360
RDGNGSIPCP PKQYGGCSSS VLSLKRIFKM NWVAKLVKNV EEMVSGCKVC DSGDLENMSE 420
GKLFQAAHRE NGDDNILYHP LSEDIRSEGI EDFRKQWSRG KPVIIKDIYD VSSMSNWDPI 480
EIWRGVRETT EEKTKDDNRT VKAIDCFDGS EIDIQIGQFI RGYSEGRIHE NGWPEMLKLK 540
DWPSPSASEE FLLYQRPEFI SKLPLLEFIH SKWGLLNVAA KLPHYSLQND VGPKIFLSYG 600
MYEELGKGDS VNNLHTNMRD LVFLLVHISE VKLKGWQKTK IGKMQKIFAE SDHKGISGDA 660
LNVSSEGDFS KFSPVGDRGD GQYADTDSNA NEMLVDPESR VTSQIGVDNL SHEDLNGSSL 720
NSSDSSHSGA LWDVFRRQDV PMLIEYLRFH WKKHGDSDHV TDDSVPSPLY DGIVYLNEHH 780
KRKLKELFGI EPWSFEQHLG EAIFVPAGCP FQVRNLQSTV QLGLDFLSPE SLGEAVRMAE 840
EIRGLPNTHD AKLQMLEVGK ISLYAASSAI KEVQKLVLDP KVGPELGFED PNLTALVSEN 900
LEKMMKRRQV P 911
Nucleotide Sequence
(Fasta)		ATGGGATTGT TAGCTGCAGT GCAGCACTTG CTTACAGAAC TTGAACGACG TCGTTTCAGT 60
CTTCTCCTTC TTCTTCTTCT CCTTCTCGCC TTCTGCATCT TACAGCCCCA CGAACTACAG 120
CTTCACGTAT TCACCAGATA CCATAATATT GGCATACCTG ATGATTTGCG GTGTAAGAGG 180
TCTGACGGGA AACAGTGGAG ATGCACTGCA TTGTCTATGC CTGATAAGAC TGTGTGTGAA 240
AAGCACTACA TACAGGCTAA GAAGAGAGCT GCAAATTCTG CAATGAGAGC CAGCATGAAA 300
AAGGGAAAGA GAAAATCAAT GGATGAAAAT GATGTATATT CGGAGAGTAG AAGTGATGAT 360
ATGGATATAA CAGCCGAGAA CCAGAAACTT GGGGATTATT CTGGTTCATT CTCCGAGAAG 420
AAGCACAAAG AAAAGTATGA TGAAAGCCGA AGAGGTTACA GGACGCCACC CCCTTCTGGT 480
ATGGAATCTT CCAGAAGCAG ATCGCTGAAG ATGTTTGATT CCAGTCCTAC AGCGGGAACT 540
TCTGAAGGGA GCTCCAATTC TTCTGATAAT ACCGGGGGGC AACCTTGTCA TCAATGTAGG 600
CGGAATGATC ACCGAGTAAC TTGGTGCCTT AGATGTGATA GAAGGGGATA CTGTGAAAGC 660
TGCATTTCAA CTTGGTACTC CAACATGCCA GTTGAAGAGA TACAGAGGAT TTGTCCCGCG 720
TGTCGTGGTA GTTGCAATTG CAAAGTGTGT ATGCGGGGAG ACAACTTGTT AAAGGCTAGA 780
ATAAGGGAGA TACCTGCACA AAACAAATTG CAGTATCTCT ATTCCCTTTT GTCAGCAGTT 840
CTTCCAGTTG TTAAGCATAT TCATAATCAG CAGTGCTTTG AGGTGGAACT AGAAAAAAGA 900
CTACGAGGAA ATGGAATGGA TCTTTGTCGG ACAAAATTGA ATGCAGATGA GCAAATGTGC 960
TGTAATTTCT GCAGGATACC AATTGTTGAT TACCATAGAC ACTGCTCAAA TTGCTCATAT 1020
GACCTCTGCC TTAGCTGCTG CAAAGATCTC AGAGATGCAA CCAAGCTTGT GCAGGATGAC 1080
AGGGATGGTA ATGGCTCCAT ACCCTGTCCA CCAAAGCAAT ATGGGGGCTG CAGTTCCTCG 1140
GTCTTATCAT TGAAACGAAT CTTCAAGATG AATTGGGTCG CGAAACTGGT GAAAAATGTT 1200
GAAGAAATGG TTAGTGGATG TAAAGTATGT GATTCTGGCG ATCTAGAGAA TATGTCTGAA 1260
GGGAAGTTGT TCCAAGCTGC TCATAGAGAA AATGGGGATG ATAACATTTT GTACCATCCA 1320
TTATCTGAAG ATATTAGAAG TGAAGGGATC GAGGACTTCA GAAAGCAATG GAGTAGAGGT 1380
AAACCTGTTA TCATCAAGGA TATATATGAT GTATCATCAA TGTCAAACTG GGATCCCATT 1440
GAGATATGGA GAGGGGTAAG GGAGACAACA GAGGAGAAAA CAAAAGATGA TAACAGAACT 1500
GTGAAGGCCA TTGATTGTTT TGATGGGAGT GAGATTGATA TTCAGATTGG TCAATTTATC 1560
AGAGGATACT CAGAGGGAAG AATTCATGAG AATGGTTGGC CAGAAATGCT CAAATTGAAA 1620
GACTGGCCTT CTCCTAGTGC TTCAGAAGAG TTCTTGTTGT ACCAGAGACC TGAGTTTATT 1680
AGTAAACTTC CTTTACTTGA ATTCATTCAC TCCAAGTGGG GTCTTCTAAA TGTAGCTGCA 1740
AAATTGCCTC ATTATTCCCT GCAGAATGAT GTTGGTCCTA AGATCTTTCT TTCTTATGGG 1800
ATGTATGAAG AACTTGGTAA AGGTGACTCA GTGAACAATC TGCATACCAA CATGCGTGAC 1860
CTAGTATTCC TTTTGGTTCA TATCAGTGAG GTCAAACTGA AAGGTTGGCA GAAGACGAAG 1920
ATAGGAAAGA TGCAGAAAAT CTTTGCTGAA TCTGATCACA AAGGAATTTC TGGCGATGCA 1980
CTAAATGTTT CAAGCGAAGG GGATTTCTCC AAATTCTCGC CTGTTGGCGA TAGAGGGGAT 2040
GGTCAGTATG CTGATACGGA TTCAAATGCC AATGAAATGT TGGTCGACCC AGAGAGCAGA 2100
GTTACTTCCC AGATTGGTGT AGATAACTTG AGTCATGAAG ATCTGAATGG TTCCAGTCTA 2160
AACAGCTCCG ACAGTAGTCA TTCTGGAGCT CTTTGGGATG TCTTCCGGAG GCAGGATGTG 2220
CCGATGCTTA TCGAGTATCT AAGATTTCAT TGGAAGAAAC ACGGAGATTC AGACCATGTA 2280
ACGGATGATT CTGTGCCAAG TCCTCTTTAC GATGGAATAG TATATCTGAA TGAGCATCAT 2340
AAGAGAAAGT TGAAAGAGTT ATTTGGAATT GAGCCTTGGT CGTTTGAACA GCATTTAGGC 2400
GAAGCTATTT TCGTTCCTGC TGGTTGTCCT TTCCAAGTGA GGAATCTTCA GTCCACTGTC 2460
CAATTGGGCC TTGATTTTCT TTCTCCAGAA AGCTTAGGTG AGGCTGTTAG AATGGCTGAA 2520
GAAATCCGTG GCCTTCCTAA TACTCATGAT GCGAAGCTGC AAATGTTGGA GGTGGGAAAG 2580
ATATCACTTT ATGCAGCAAG CTCAGCCATC AAAGAAGTTC AGAAGTTGGT TCTGGATCCT 2640
AAAGTTGGTC CTGAGCTTGG ATTTGAGGAT CCCAATTTGA CCGCATTGGT GTCAGAGAAT 2700
TTGGAGAAAA TGATGAAGAG ACGTCAGGTA CCTTGAACAT AAACCAGTGC AGAGAGGTTT 2760
GTATCCGAGT ATGTCTGAAT TCATATGTAC AGAAGAAACA GCAAAACCCC TAGGGAATGT 2820
GCATCGGAGT ACTTGATTTT GTTCTGCTAA ATGCTAGAAC GCTCTCAGGG GATGTGCATT 2880
GTTACCGCTT ACTTTGGTCT CCCATAATCT CATAGGTTGT AGCCTGTGAT ATCTATCTAT 2940
CTATTATCTT ATGAAGAAAT CAACAGCTGT GTGCTCCCAT AGTCTTGTAG TAGAAGATAT 3000
CAATAGGTCT TATTGTAATT GTAATTTCAT AGGTGGAATG AAACATCAAT TCAAGATATC 3060
A 3062
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sot-0072 PGSC0003DMT400057764 Solanum tuberosum 93 0.0 1337
WERAM-Viv-0089 VIT_14s0060g02420.t01 Vitis vinifera 64 0.0 1159
WERAM-Prp-0108 EMJ09853 Prunus persica 62 0.0 1124
WERAM-Glm-0262 GLYMA20G37910.2 Glycine max 60 0.0 1100
WERAM-Thc-0068 EOY11467 Theobroma cacao 60 0.0 1097
WERAM-Met-0026 AES61379 Medicago truncatula 59 0.0 1073
WERAM-Amt-0068 ERN16983 Amborella trichopoda 49 0.0 892
WERAM-Brd-0031 BRADI1G62640.1 Brachypodium distachyon 44 0.0 778
WERAM-Tra-0139 Traes_4AS_93108583B.2 Triticum aestivum 45 0.0 763
WERAM-Org-0036 ORGLA03G0163900.1 Oryza glaberrima 43 0.0 749
WERAM-Orm-0039 OMERI03G15300.1 Oryza meridionalis 44 0.0 741
WERAM-Sei-0127 Si034162m Setaria italica 43 0.0 727
WERAM-Sob-0008 Sb01g035540.1 Sorghum bicolor 43 0.0 719
WERAM-Ors-0031 OS03T0346700-01 Oryza sativa 46 0.0 701
WERAM-Orp-0035 OPUNC03G16540.1 Oryza punctata 41 0.0 659
WERAM-Ori-0042 BGIOSGA012608-PA Oryza indica 44 0.0 649
WERAM-Aet-0090 EMT30788 Aegilops tauschii 46 0.0 646
WERAM-Orr-0036 ORUFI03G17780.1 Oryza rufipogon 44 0.0 643
WERAM-Orgl-0038 OGLUM03G17600.1 Oryza glumaepatula 44 0.0 641
WERAM-Orb-0036 OBART03G17150.1 Oryza barthii 43 0.0 633
WERAM-Orni-0034 ONIVA03G18210.1 Oryza nivara 44 0.0 631
WERAM-Orbr-0043 OB03G26770.1 Oryza brachyantha 45 4e-152 536
WERAM-Pot-0147 POPTR_0015s01510.1 Populus trichocarpa 40 3e-148 523
WERAM-Lep-0039 LPERR03G14970.1 Leersia perrieri 39 2e-146 517
WERAM-Arl-0098 fgenesh2_kg.6__ 3604__ AT4G00990.1 Arabidopsis lyrata 37 2e-138 491
WERAM-Art-0095 AT4G00990.1 Arabidopsis thaliana 36 6e-137 486
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 34 5e-126 449
WERAM-Bro-0002 Bo00957s030.1 Brassica oleracea 32 3e-125 447
WERAM-Brr-0086 Bra016801.1-P Brassica rapa 33 2e-124 444
WERAM-Orl-0076 KN539615.1_FGP001 Oryza longistaminata 34 1e-114 411
WERAM-Mua-0068 GSMUA_Achr4P05350_001 Musa acuminata 37 5e-110 396
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 37 7e-97 352
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 34 9e-90 329
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 31 1e-85 315
WERAM-Gam-0008 ENSGMOP00000000972.1 Gadus morhua 26 6e-35 147
WERAM-Lac-0170 ENSLACP00000020024.1 Latimeria chalumnae 27 7e-34 143
WERAM-Ect-0040 ENSETEP00000003644.1 Echinops telfairi 24 6e-21 100
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 34 7e-20 97.1
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 35 1e-19 96.3
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 35 1e-19 96.3
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 34 3e-19 95.1
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 34 3e-19 94.7
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 34 4e-19 94.7
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 34 4e-19 94.7
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 34 4e-19 94.7
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 34 4e-19 94.7
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 34 4e-19 94.7
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 34 4e-19 94.7
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 34 4e-19 94.7
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 34 4e-19 94.7
WERAM-Tub-0003 ENSTBEP00000000295.1 Tupaia belangeri 34 4e-19 94.7
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 34 4e-19 94.7
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 34 4e-19 94.7
WERAM-Ere-0095 ENSEEUP00000009792.1 Erinaceus europaeus 34 4e-19 94.4
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 34 4e-19 94.4
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 34 5e-19 94.4
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 34 5e-19 94.4
WERAM-Mae-0023 ENSMEUP00000001666.1 Macropus eugenii 34 5e-19 94.4
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 34 5e-19 94.4
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 34 5e-19 94.4
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 34 5e-19 94.4
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 34 5e-19 94.4
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 34 5e-19 94.4
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 33 5e-19 94.4
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 34 5e-19 94.4
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 34 5e-19 94.4
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 34 5e-19 94.4
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 34 5e-19 94.4
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 34 5e-19 94.4
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 34 6e-19 94.4
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 34 6e-19 94.4
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 34 6e-19 94.0
WERAM-Soa-0091 ENSSARP00000008521.1 Sorex araneus 34 7e-19 94.0
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 33 1e-18 93.2
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 33 1e-18 93.2
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 33 1e-18 93.2
WERAM-Mum-0157 ENSMUSP00000037628.7 Mus musculus 34 1e-18 93.2
Created Date 25-Jun-2016