WERAM Information

Tag Content
WERAM ID WERAM-Sob-0140
Ensembl Protein ID Sb10g031300.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb10g031300 Sb10g031300.1 Sb10g031300.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 5.00e-12 46.6 410 663
Organism Sorghum bicolor
Domain Profile
  Me_Reader PHD
        PHD.txt   4 ClvCgkddegeke....mvqCdeCd 24 
                    C  C k+++ + +    ++ Cd+C 
  Sb10g031300.1 410 CKGC-KSSFSTLCsgkfALFCDSCL 433
                    7777.77776666666688899995 PP
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    ++C +C  d+ +   ++ Cd+C+++fH +Cv+l+  s+p+g  w+C+ C++
  Sb10g031300.1 520 DLCSIC-SDGGQ---LLLCDTCPRAFHRECVSLS--SAPKG-TWCCRYCEN 563
                    57****.44444...9******************..*****.*******86 PP
        PHD.txt   4 ClvCgkddegeke.....mvqCdeCddwfHlkCvklp....lsslpegkswyCps 49 
                    C +C+ +d+ +k+     ++ Cd+C + +H+ C+k      l+ lpeg +wyC +
  Sb10g031300.1 610 CALCKLHDFSKKKfstrtVLLCDQCGREYHVGCLKEHnmadLTALPEG-AWYCST 663
                    999*755555444577779****************9999999******.****75 PP
Protein Sequence
(Fasta)		MEGEADGGGD SFVLRSGVRA GLKREFAFAI ASQAALSSSS APLGRTRRSS RTLNSSAAST 60
SSAAASTSSF STHDTKPKAK RPRPPDPPPP PEDAPAPGED HEGAAVELPG PVLALMAAAG 120
PSPPPTPSTP QPHAGADADP AHRDNIIIPP ESSPRRITRS MLQPKSPPPT AARSPDNVAP 180
LKPKPEPPEE EEPVPALRRF TRSLLVKDKD SNDDDLSGTT TASNASSSPP LNTTTTTTST 240
SSNKRNKNTN KIPTNLRELL ATGLLEGQPV KYIMRKGKYR GYCNFDQGSI SHLISASSTP 300
WSYQTHRHTV LMLFMQRPKS EFSPLLQNHH LFIPALRIEA MEHELQVVSP YYFEVHAGST 360
KKHPSDYIFL ENGNNLHDVL RACTNVTLDM LESAVRKAIG PAPQKRTFRC KGCKSSFSTL 420
CSGKFALFCD SCLESKGAKN NSRDKGMHKV VFMSGVLQEG TDVGYYVGGK VSPSQFEAHA 480
GRAARRKPYH NIYMSNGVSL HELSISLLKG QKMSNRQSDD LCSICSDGGQ LLLCDTCPRA 540
FHRECVSLSS APKGTWCCRY CENRQQRESC LAYNNNAIAA GRVEGVDALE QIFTRSIRIA 600
TTPETGFGGC ALCKLHDFSK KKFSTRTVLL CDQCGREYHV GCLKEHNMAD LTALPEGAWY 660
CSTDCVRINQ TLQDLLNHGG EPVPTMDLDV IKKKREVKGF NEDADLDVRW RVLKDKSSDD 720
SKLVLSKAVA IFHETFDPII QVSTGRDLIP AMVYGRSARD QDYTGMYCAV LTVNNTVVSA 780
GLFRIMGNEI AELPLVATSR DSQGLGYFQA LFSCIERLLA SLEVKHFVLP AAEEAESIWT 840
ERFGFTKISQ DELREYLKGG RTTVFQGTSN LHKLVAKVEC
Nucleotide Sequence
(Fasta)		TCGGGTTCGG CGATGCAGCT CATCAATTCC ATTTCCAGCT CCAGATCGGA GTAAATCTGC 60
TTCTGATCGG ATTCGATTGG ATTTGATTCC GGCTGTGTCG AACCCTAGCT TCCATCTCGA 120
TCCAATCCCA GTTCCGCTTC TTCTTCTTCT TCCTCCTCCC CGGCAGCAGA GGCGGCCGTC 180
GTCGAATGAG TTGAAGATGA CGGCATACTC CTCGTCCTCC TAGGAAAGGT CAGGGAAAGG 240
AAGGATTCGA GGGAAGAGAG GAGGCTGTTG GGCTCCTCCT CCATGGAGGG CGAGGCGGAC 300
GGCGGCGGCG ACTCCTTCGT GCTGCGCTCC GGCGTCCGCG CGGGCCTCAA GCGCGAATTC 360
GCCTTCGCCA TCGCCTCGCA GGCCGCCCTT TCGTCCTCAT CCGCACCCCT CGGCCGCACC 420
CGCCGCTCAT CCCGCACGCT CAACTCATCG GCCGCTTCGA CCTCCTCCGC CGCCGCCTCG 480
ACATCCTCCT TCTCAACTCA CGACACCAAG CCAAAGGCCA AGCGCCCGCG CCCACCGGAT 540
CCTCCCCCTC CACCAGAGGA TGCCCCCGCG CCCGGAGAAG ATCATGAAGG GGCCGCTGTC 600
GAGCTGCCCG GCCCCGTGCT CGCCTTGATG GCTGCCGCTG GGCCCAGCCC TCCGCCGACG 660
CCTTCGACTC CGCAACCCCA TGCCGGCGCG GATGCGGATC CGGCACACCG CGACAACATC 720
ATCATCCCGC CGGAGTCGTC GCCCAGGCGC ATCACGCGCT CCATGCTCCA GCCCAAGTCT 780
CCCCCTCCCA CCGCTGCTCG TTCTCCTGAC AATGTGGCTC CGCTCAAACC CAAACCGGAA 840
CCGCCGGAGG AAGAGGAGCC CGTTCCAGCG TTGAGGCGCT TCACCAGATC ACTCTTGGTC 900
AAGGATAAGG ACAGCAACGA CGACGACCTC TCAGGCACCA CCACCGCCAG CAATGCCTCC 960
TCCTCCCCTC CACTCAACAC CACCACTACC ACCACAAGTA CCAGCAGCAA CAAGAGGAAT 1020
AAGAATACAA ACAAGATTCC CACCAACCTC AGGGAGCTGC TCGCCACCGG CCTGCTTGAA 1080
GGTCAGCCCG TCAAGTATAT CATGAGGAAA GGCAAGTATC GTGGGTACTG TAATTTTGAC 1140
CAGGGATCTA TTTCTCATCT TATTTCAGCG AGCAGTACTC CGTGGAGTTA TCAAACGCAT 1200
CGGCATACTG TGCTCATGCT CTTCATGCAA AGGCCGAAAA GTGAGTTTTC TCCTCTTCTC 1260
CAAAATCACC ACCTATTTAT CCCTGCTTTG AGAATTGAAG CAATGGAACA TGAGTTGCAG 1320
GTTGTTTCAC CTTACTACTT TGAGGTGCAT GCTGGGAGTA CGAAAAAGCA CCCATCCGAT 1380
TACATTTTCC TGGAAAATGG AAATAATCTG CATGATGTAT TGAGGGCATG CACAAATGTT 1440
ACGTTAGACA TGCTGGAGTC TGCAGTACGG AAGGCAATAG GCCCAGCACC TCAGAAGAGA 1500
ACATTCAGAT GCAAAGGCTG CAAAAGTTCA TTCAGCACAC TCTGCAGTGG GAAATTTGCT 1560
TTGTTTTGTG ACTCATGTCT TGAGTCCAAG GGTGCTAAGA ATAATAGCAG GGATAAGGGG 1620
ATGCATAAGG TTGTTTTCAT GAGTGGCGTT TTACAAGAGG GCACTGATGT TGGCTACTAT 1680
GTTGGTGGAA AGGTTAGTCC TTCACAGTTT GAAGCTCATG CTGGTCGAGC TGCTCGACGG 1740
AAACCTTACC ACAACATATA TATGTCGAAC GGCGTATCAC TACATGAGCT GTCAATTTCA 1800
CTCTTGAAAG GTCAAAAGAT GTCAAACAGA CAAAGTGATG ACTTGTGCAG CATTTGTTCA 1860
GATGGTGGGC AACTACTGCT TTGTGATACC TGTCCAAGAG CTTTTCACAG AGAATGTGTT 1920
AGCTTATCTT CTGCCCCGAA GGGAACTTGG TGTTGCCGAT ATTGTGAGAA TAGACAACAG 1980
AGGGAAAGTT GTTTGGCATA TAACAACAAT GCAATAGCTG CTGGGAGGGT TGAAGGAGTT 2040
GATGCCTTGG AACAAATATT TACACGGTCA ATACGTATTG CTACAACACC TGAGACTGGA 2100
TTTGGTGGTT GCGCACTGTG CAAGCTCCAT GATTTCAGCA AAAAGAAATT CAGTACCCGG 2160
ACCGTGCTGC TTTGTGACCA ATGTGGTAGA GAATATCATG TTGGTTGCCT CAAGGAACAT 2220
AATATGGCTG ATCTGACGGC ATTGCCTGAG GGAGCATGGT ATTGTTCTAC GGACTGTGTG 2280
CGGATTAACC AGACACTGCA AGATTTACTT AACCATGGAG GAGAACCTGT TCCTACCATG 2340
GATTTAGATG TTATTAAGAA GAAACGAGAA GTGAAAGGTT TTAATGAGGA TGCTGACCTT 2400
GATGTTAGAT GGAGAGTTTT AAAGGACAAG AGCTCGGATG ATAGTAAACT AGTGCTCTCC 2460
AAAGCAGTTG CCATTTTCCA TGAAACTTTT GATCCCATTA TCCAGGTTTC AACTGGGCGG 2520
GACCTCATTC CAGCCATGGT TTATGGGAGG AGTGCAAGGG ATCAAGATTA CACAGGAATG 2580
TATTGTGCTG TGTTAACTGT GAACAATACT GTAGTTTCCG CGGGTCTTTT CCGCATCATG 2640
GGTAATGAAA TTGCTGAGCT TCCGTTGGTT GCTACAAGTA GGGATAGCCA AGGTTTGGGG 2700
TATTTCCAAG CACTTTTTTC CTGCATAGAA CGGCTGTTGG CATCTTTGGA GGTGAAACAT 2760
TTTGTGCTAC CAGCTGCAGA GGAAGCAGAG TCTATCTGGA CAGAACGTTT TGGGTTCACA 2820
AAGATAAGCC AGGATGAGCT GCGTGAATAC CTCAAGGGTG GGCGAACAAC TGTGTTTCAG 2880
GGGACGTCAA ACCTACACAA GCTGGTTGCG AAAGTTGAAT GCTAGTTATG TGCATGGGAG 2940
GAAGAGCAAG GACATGAAGC TAAGAAGCAG CTGAATGTTT GCGTGCCTCT GGGATTGACG 3000
CAGTAGGAAA GGCGCACCCT GATCCCTTTC TTCTAAATGT TGGCGAGCAT GGTGGTATTG 3060
GCATCTTGAT CTGTTTCCAT AGCTAAAGGT GAAGAAGATT GTGTAAGATA CAAGGGACAA 3120
GCTGCAAAGG CAAAAGCCAA AGCTGAGTGA ATTTCAGGCA CCTTATTGGG TGGCGGTATG 3180
CGCGTTGTGG GACGCTGTGT TTGTTGAGTA GGTGTTAGCT GGGGCTGGAG TGAGATGGCG 3240
AGTTGGTGAC TACATTTGTG TTCTGTTGGT GGGTTTTTCA CTGCTAAGGT GACTGTTGTA 3300
TCTGTTGATA TCTTTCTGTT TTATGATAGT GGCAGTGATA CCAGGCTGTT AGGAGTGGGG 3360
TGGGGAGGTT TCAAATTCAA CGTACGTCAT GAACATGTGA TTCCTCTTTA TTGGCCTGAC 3420
TCACCCATGG ATGTTAGTGT GGATGCAATG TAGACATGTA GTACAGCTGT TGTAATGTAA 3480
CATAAGTATT GCTTTCCCCG CCTATTTAAC ATATTTAATT TGCTGCG 3528
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sei-0021 Si005834m Setaria italica 84 0.0 970
WERAM-Lep-0068 LPERR06G23780.2 Leersia perrieri 70 0.0 943
WERAM-Orgl-0067 OGLUM06G29720.1 Oryza glumaepatula 67 0.0 919
WERAM-Orni-0068 ONIVA06G31450.1 Oryza nivara 65 0.0 875
WERAM-Orb-0069 OBART06G28330.1 Oryza barthii 65 0.0 874
WERAM-Tru-0001 TRIUR3_00440-P1 Triticum urartu 67 0.0 874
WERAM-Orl-0030 KN538785.1_FGP006 Oryza longistaminata 65 0.0 837
WERAM-Orr-0071 ORUFI06G30250.1 Oryza rufipogon 65 0.0 837
WERAM-Brd-0016 BRADI1G29167.1 Brachypodium distachyon 74 0.0 835
WERAM-Org-0067 ORGLA06G0289000.1 Oryza glaberrima 60 0.0 804
WERAM-Mua-0153 GSMUA_AchrUn_randomP08820_001 Musa acuminata 55 0.0 720
WERAM-Tra-0282 Traes_7AL_153E1A74A.2 Triticum aestivum 78 0.0 709
WERAM-Ori-0062 BGIOSGA020496-PA Oryza indica 67 0.0 699
WERAM-Prp-0031 EMJ05208 Prunus persica 53 1e-165 581
WERAM-Thc-0117 EOY33667 Theobroma cacao 50 4e-163 573
WERAM-Viv-0039 VIT_06s0061g00840.t01 Vitis vinifera 46 2e-156 550
WERAM-Pot-0098 POPTR_0009s00930.1 Populus trichocarpa 46 1e-155 548
WERAM-Ors-0053 OS06T0101000-01 Oryza sativa 48 6e-155 545
WERAM-Sol-0136 Solyc11g066480.1.1 Solanum lycopersicum 51 9e-155 545
WERAM-Orbr-0067 OB06G10140.1 Oryza brachyantha 48 2e-154 544
WERAM-Orm-0055 OMERI06G00010.1 Oryza meridionalis 47 1e-153 541
WERAM-Sot-0002 PGSC0003DMT400001219 Solanum tuberosum 50 3e-153 540
WERAM-Hov-0048 MLOC_5069.1 Hordeum vulgare 80 3e-152 536
WERAM-Orp-0055 OPUNC06G00070.1 Oryza punctata 48 2e-150 531
WERAM-Zem-0076 GRMZM2G134214_P01 Zea mays 47 8e-149 525
WERAM-Met-0159 AES81946 Medicago truncatula 55 4e-143 506
WERAM-Glm-0253 GLYMA19G37190.2 Glycine max 56 1e-137 488
WERAM-Amt-0092 ERN04758 Amborella trichopoda 53 3e-135 480
WERAM-Bro-0081 Bo4g164940.1 Brassica oleracea 50 6e-132 469
WERAM-Brr-0168 Bra034381.1-P Brassica rapa 50 1e-131 468
WERAM-Arl-0074 fgenesh2_kg.4__ 1712__ AT2G36720.1 Arabidopsis lyrata 51 5e-129 459
WERAM-Art-0047 AT2G27980.1 Arabidopsis thaliana 51 1e-128 458
WERAM-Php-0109 PP1S50_31V6.1 Physcomitrella patens 38 3e-83 307
WERAM-Aet-0069 EMT23788 Aegilops tauschii 30 5e-46 184
WERAM-Sem-0001 EFJ24916 Selaginella moellendorffii 27 7e-38 156
WERAM-Cap-0209 ENSCPOP00000020779.1 Cavia porcellus 30 5e-15 80.9
WERAM-Dar-0151 ENSDARP00000014790.7 Danio rerio 29 2e-14 79.0
WERAM-Ten-0044 ENSTNIP00000001486.1 Tetraodon nigroviridis 29 2e-14 79.0
WERAM-Orn-0112 ENSONIP00000011684.1 Oreochromis niloticus 30 4e-14 77.8
WERAM-Pof-0104 ENSPFOP00000009594.2 Poecilia formosa 29 5e-14 77.8
WERAM-Orla-0061 ENSORLP00000007931.1 Oryzias latipes 30 5e-14 77.8
WERAM-Xim-0007 ENSXMAP00000001083.1 Xiphophorus maculatus 29 6e-14 77.4
WERAM-Anp-0142 ENSAPLP00000015426.1 Anas platyrhynchos 31 6e-14 77.4
WERAM-Gog-0020 ENSGGOP00000001905.2 Gorilla gorilla 29 9e-14 76.6
WERAM-Poa-0040 ENSPPYP00000004777.1 Pongo abelii 29 1e-13 76.6
WERAM-Mam-0174 ENSMMUP00000024592.2 Macaca mulatta 29 1e-13 76.6
WERAM-Hos-0081 ENSP00000349508.2 Homo sapiens 29 1e-13 76.6
WERAM-Ran-0118 ENSRNOP00000052823.4 Rattus norvegicus 29 1e-13 76.6
WERAM-Chs-0125 ENSCSAP00000006661.1 Chlorocebus sabaeus 29 1e-13 76.6
WERAM-Paa-0209 ENSPANP00000002367.1 Papio anubis 29 1e-13 76.6
WERAM-Nol-0041 ENSNLEP00000005322.2 Nomascus leucogenys 29 1e-13 76.6
WERAM-Tut-0182 ENSTTRP00000015268.1 Tursiops truncatus 29 1e-13 76.6
WERAM-Ptv-0138 ENSPVAP00000011854.1 Pteropus vampyrus 29 1e-13 76.6
WERAM-Otg-0102 ENSOGAP00000008965.2 Otolemur garnettii 29 1e-13 76.3
WERAM-Mum-0216 ENSMUSP00000060054.8 Mus musculus 29 1e-13 76.3
WERAM-Caj-0091 ENSCJAP00000015091.2 Callithrix jacchus 29 1e-13 76.3
WERAM-Xet-0022 ENSXETP00000006377.3 Xenopus tropicalis 29 1e-13 76.3
Created Date 25-Jun-2016