WERAM Information

Tag Content
WERAM ID WERAM-Sob-0079
Ensembl Protein ID Sb04g038170.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb04g038170 Sb04g038170.1 Sb04g038170.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 6.10e-73 245.8 229 985
Organism Sorghum bicolor
Domain Profile
  HDM JHDM2
      JHDM2.txt 113 ekirellekvskeqgaevppdhd 135
                    e +r+ l+kv keq++  +++ +
  Sb04g038170.1 229 ESMRKKLNKVDKEQKQFPSTKDE 251
                    45788899999988874443333 PP
      JHDM2.txt   5 rdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvyvgilkkkwaeedlkellksieeeeldev 88 
                    r g+lNLa klp  +++pdlgPk y AyGl +e +r++++t+lh+d+sdavnil++    + ++ + ++++++k + e++l+e+
  Sb04g038170.1 626 RCGPLNLAAKLPAGVLKPDLGPKSYIAYGLYKELGRGDSVTKLHCDISDAVNILTHTAEVTCQTDHRQIEKIQKDMREQDLQEL 709
                    569*****************************************************999999999999999****999999875 PP
      JHDM2.txt  93 vqdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlipagapHqvqnl 184
                     ++ ++  galW+if+++d +k++++l+k++ e+++    +v+++ +pihdqs+yl+++++++L+eeyG+e+wt+ Qklg+av+ipag+pHqv+nl
  Sb04g038170.1 863 SEQQSTGAGALWDIFRRQDSDKLQDYLRKHCSEFRHiycnPVKKVFHPIHDQSFYLTQEHKRKLKEEYGIEPWTFEQKLGEAVFIPAGCPHQVRNL 958
                    344455679**************************9999999999*************************************************** PP
      JHDM2.txt 185 kscvkvaedFvsPEnvkecfrltkeyr 211
                    ksc+kva dFvsPEnv ec++lt e+r
  Sb04g038170.1 959 KSCIKVALDFVSPENVGECVKLTGEFR 985
                    ************************998 PP
Protein Sequence
(Fasta)		MADEAEWIEA EVGNAGAGPP APGGGEETKR KRGRLKGSLN KNKKSNKDRT PKAKTGTKRR 60
RRQRTSDRDL SVPVVLGDLG RGVAAGIRQL RERRPAPNAF FDRDSDSYTE HDDDEETMIN 120
QVNHESAKTG VSVKKRGRGR PRKMEADQLD SKSQSSNGKS NGQMNSNAAG KKRGRGRPKK 180
LAVEQVFSRC QFSSGETNKS DAEAARSKQS RNHKLLQNAK KRKRDVGKES MRKKLNKVDK 240
EQKQFPSTKD ETLDKNNMNC NCKACLRMKG VEEPPKKEIS KENEIRYACH IVSLLLPWMR 300
ELRQEQMEEK EVEANIRGVS MNEIKVEEAE VDLDDRVYCD RCRTSIVDFH RSCKHCFYDL 360
CLNCCKELRK GEIAGGEEVE YVPPEPKGRS YSFGKIPLSK DADRSKNSSN GQSYNGMPAV 420
GNPNNGLLLW KAKSDGSIPC PPKEVGGCGS TLLDLKCLFP EKTLAEIEDR ADKVLRSETL 480
AKAMVSRSDR CPCFDHSGKI RTESKSLREA ASRKDSSDNF LYCPVATGIQ DDDIVHFQMH 540
WAKGEPVVVS DVLQLTSGLS WEPMVEINIH KFFSGYTTGR THARTHWPQM LKLKDWPSSS 600
SFDKRLPRHG AEFISALPFR EYTDPRCGPL NLAAKLPAGV LKPDLGPKSY IAYGLYKELG 660
RGDSVTKLHC DISDAVNILT HTAEVTCQTD HRQIEKIQKD MREQDLQELY GGLKSCSELK 720
LSPAPTECRD ESVDEGLKTS YIREDNCVNR DNYNGLDINA LPPDDDGDDA KDKESSHESE 780
SQSELGQCSY HSNGVNTTDG MHSGAHYISH NQKSTDSIQL KKVGIKPQGE KSEKVDCSGI 840
DGIDAYLKGS SEDNLEMPVV ESSEQQSTGA GALWDIFRRQ DSDKLQDYLR KHCSEFRHIY 900
CNPVKKVFHP IHDQSFYLTQ EHKRKLKEEY GIEPWTFEQK LGEAVFIPAG CPHQVRNLKS 960
CIKVALDFVS PENVGECVKL TGEFRRLPSF HKAKEDKLEI KKMALHALNE AVNFLDPCSS 1020
EGLKIGVGEN SCGDESADEK PMPKRRGIKE S 1051
Nucleotide Sequence
(Fasta)		ATGGCGGACG AGGCGGAGTG GATAGAGGCT GAGGTCGGGA ACGCGGGCGC GGGTCCTCCA 60
GCGCCCGGAG GCGGCGAGGA AACCAAGAGG AAGAGGGGGA GGCTTAAAGG TAGCCTCAAC 120
AAGAACAAGA AGAGCAACAA GGATAGGACG CCCAAGGCCA AGACCGGGAC CAAGCGGAGG 180
CGGAGGCAGC GCACCAGCGA CCGGGACTTG TCGGTGCCCG TGGTGCTCGG GGATCTAGGG 240
CGCGGGGTGG CGGCCGGGAT CAGGCAGCTC AGGGAGAGGA GGCCGGCGCC CAATGCGTTC 300
TTCGACCGGG ACAGCGACAG CTATACTGAG CATGATGATG ATGAGGAAAC TATGATTAAT 360
CAAGTCAACC ACGAGAGTGC TAAAACAGGT GTTTCTGTAA AGAAGAGAGG AAGAGGAAGA 420
CCCAGAAAAA TGGAAGCTGA CCAACTGGAT AGTAAGTCCC AGAGTTCCAA TGGTAAAAGC 480
AATGGCCAAA TGAATTCGAA TGCTGCTGGG AAGAAAAGGG GAAGGGGAAG ACCAAAGAAA 540
CTAGCAGTAG AACAAGTGTT TAGTAGGTGC CAGTTCTCCA GTGGTGAAAC AAACAAAAGT 600
GATGCTGAGG CAGCAAGGAG CAAGCAGTCA AGGAATCATA AACTTCTGCA GAATGCAAAG 660
AAGCGGAAAA GAGATGTAGG GAAAGAGTCT ATGAGAAAAA AGTTGAACAA AGTGGATAAA 720
GAACAAAAGC AGTTCCCATC CACCAAGGAT GAAACCCTCG ATAAAAATAA TATGAACTGT 780
AATTGCAAGG CCTGCCTACG GATGAAGGGA GTTGAAGAGC CTCCAAAAAA GGAGATCTCT 840
AAAGAAAATG AAATTCGTTA TGCTTGTCAT ATCGTAAGCT TGCTGCTTCC CTGGATGAGA 900
GAATTGCGAC AAGAACAGAT GGAGGAGAAG GAAGTAGAGG CTAATATACG AGGAGTTTCA 960
ATGAATGAGA TAAAAGTGGA AGAAGCTGAG GTTGACCTAG ATGATCGTGT ATATTGTGAC 1020
AGGTGTAGAA CATCTATTGT TGATTTTCAT AGAAGCTGCA AGCATTGTTT CTATGATCTT 1080
TGTCTTAACT GCTGCAAGGA GCTTCGCAAA GGTGAGATCG CAGGAGGAGA AGAGGTGGAG 1140
TATGTGCCAC CTGAACCTAA AGGTAGGAGT TATTCTTTTG GCAAGATTCC TCTGTCAAAG 1200
GATGCTGATA GAAGTAAGAA CTCCTCAAAT GGTCAGTCTT ACAACGGCAT GCCTGCTGTT 1260
GGCAACCCCA ATAACGGCCT GTTGCTCTGG AAAGCAAAGA GTGATGGTAG CATACCTTGT 1320
CCACCAAAGG AAGTAGGAGG CTGTGGTAGT ACACTTCTGG ACCTCAAGTG CTTGTTTCCA 1380
GAGAAGACGC TTGCTGAGAT AGAAGATAGA GCTGACAAAG TTCTCAGGAG TGAGACATTA 1440
GCTAAAGCAA TGGTTAGTAG AAGTGATCGG TGCCCTTGCT TTGATCATTC GGGCAAGATA 1500
AGAACTGAAA GCAAATCATT ACGGGAGGCT GCAAGCAGGA AGGACTCAAG TGATAACTTC 1560
CTATACTGTC CAGTTGCTAC TGGTATTCAA GATGATGACA TAGTGCATTT TCAGATGCAT 1620
TGGGCAAAAG GTGAGCCTGT TGTTGTTTCT GATGTCCTTC AGTTAACCTC TGGTCTGAGT 1680
TGGGAGCCAA TGGTGGAAAT TAACATACAC AAGTTCTTTT CGGGATATAC AACAGGCAGA 1740
ACTCATGCTA GGACTCACTG GCCTCAGATG CTTAAGCTAA AAGACTGGCC TTCTTCTAGT 1800
TCCTTTGACA AGCGATTGCC GCGACATGGT GCCGAATTTA TTAGCGCATT GCCATTTCGT 1860
GAGTATACAG ATCCACGATG TGGCCCACTA AATCTTGCAG CCAAGCTTCC TGCTGGTGTC 1920
TTGAAGCCAG ATCTTGGACC CAAAAGTTAC ATTGCTTATG GGCTCTACAA AGAGCTAGGC 1980
AGGGGTGATT CTGTGACCAA GCTTCACTGT GACATATCTG ATGCGGTAAA TATCTTAACA 2040
CACACAGCTG AAGTCACTTG TCAGACTGAT CACCGCCAAA TTGAAAAAAT CCAAAAAGAC 2100
ATGAGAGAGC AAGATCTGCA GGAACTATAT GGGGGTCTAA AATCCTGCTC TGAGCTGAAG 2160
TTGTCACCAG CTCCAACTGA ATGCAGGGAT GAATCTGTTG ATGAAGGATT GAAGACCTCA 2220
TATATTAGAG AAGACAATTG TGTCAACAGA GACAACTATA ATGGTTTGGA CATCAATGCT 2280
TTACCACCTG ATGACGATGG AGATGATGCA AAGGATAAAG AATCATCTCA TGAATCAGAA 2340
TCACAAAGTG AACTAGGTCA GTGTTCCTAT CACAGCAACG GGGTCAACAC AACTGATGGA 2400
ATGCACAGTG GAGCTCATTA CATTTCACAC AATCAAAAAA GCACTGACAG TATACAACTC 2460
AAGAAAGTTG GCATTAAACC TCAAGGAGAG AAATCTGAAA AGGTTGATTG CAGTGGCATT 2520
GATGGCATTG ATGCTTATCT AAAAGGAAGT TCTGAAGATA ATCTGGAAAT GCCTGTTGTT 2580
GAGAGCTCAG AGCAACAGAG CACCGGTGCC GGTGCTCTGT GGGATATCTT CCGCAGACAG 2640
GATTCTGATA AATTACAAGA TTATCTTAGG AAGCATTGCT CTGAATTCCG GCATATTTAC 2700
TGCAATCCAG TGAAAAAGGT ATTTCACCCA ATTCATGATC AGTCTTTCTA TTTAACTCAG 2760
GAGCATAAGA GAAAGCTCAA GGAAGAATAT GGAATTGAAC CCTGGACGTT TGAACAGAAG 2820
CTTGGTGAAG CTGTTTTCAT TCCTGCTGGA TGTCCTCACC AAGTGAGAAA TTTGAAGTCC 2880
TGCATCAAAG TTGCGCTTGA TTTTGTTTCC CCAGAAAATG TTGGTGAGTG TGTTAAGTTG 2940
ACTGGGGAGT TTAGACGACT TCCATCTTTC CACAAAGCTA AAGAAGACAA ACTAGAGATT 3000
AAGAAGATGG CTCTTCATGC CCTGAACGAA GCTGTAAACT TCTTGGATCC TTGTTCCTCA 3060
GAAGGGTTGA AGATTGGGGT TGGTGAGAAC AGCTGTGGAG ATGAATCTGC AGATGAGAAG 3120
CCGATGCCTA AAAGGCGAGG CATCAAGGAG AGCTGACGCC CAAAAGTGAA GCTGCCGATG 3180
AGAAGCCTAA AAGGCGAGGT CACCCAGTAG GTTCTCGAAA TTGTGGCGAT TGATTTGTCA 3240
AGTTTGGGCT GGGGGTGATG CATTTTGGAA GGAGCTGAGC TTGTAGGTTG TATCGATGGT 3300
CAGGCATTAA GGTGTCTGAG CTTTTGTTCA TGTATGGTGA CAGCCGGCCG ACGCCGATGG 3360
ATGGAGAACC ATTGGTTGGT TAGTTGGTGC GTGGAGACCC AGTCATGTAG CAGGCGGGTA 3420
GGCAGGCACT AGAGAGAACT AGGGTGAGAA ACAGTAGGGC ATATGTATGC TGCTGATATT 3480
TTGCGACTTA GCATCCGAGC CTCCCTATGC AATGGTGGTG CTGTTTCGTT ACTTGTAGTC 3540
AAATTTAGGT ATGAATTTGA CCAAGCATTT GTCTAGATTT ATATAAAAAA ATTGCATTCA 3600
TCTAAAATTG CATTCTTTTT TGGGACCGAG GGAGTATATG CAGTTACT 3649
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0126 GRMZM2G383210_P01 Zea mays 85 0.0 1554
WERAM-Brd-0103 BRADI4G27417.1 Brachypodium distachyon 56 0.0 979
WERAM-Ors-0026 OS02T0828900-01 Oryza sativa 64 0.0 969
WERAM-Orbr-0035 OB02G45020.1 Oryza brachyantha 65 0.0 966
WERAM-Ori-0030 BGIOSGA009342-PA Oryza indica 64 0.0 966
WERAM-Org-0029 ORGLA02G0333900.1 Oryza glaberrima 63 0.0 962
WERAM-Orm-0031 OMERI02G35990.1 Oryza meridionalis 63 0.0 951
WERAM-Orni-0028 ONIVA02G41010.1 Oryza nivara 63 0.0 947
WERAM-Orb-0029 OBART02G38100.1 Oryza barthii 62 0.0 944
WERAM-Orgl-0016 OGLUM01G49660.1 Oryza glumaepatula 62 0.0 940
WERAM-Lep-0033 LPERR02G31600.1 Leersia perrieri 62 0.0 935
WERAM-Orp-0027 OPUNC02G35390.1 Oryza punctata 61 0.0 920
WERAM-Orr-0028 ORUFI02G39830.1 Oryza rufipogon 60 0.0 882
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 57 0.0 874
WERAM-Aet-0028 EMT26740 Aegilops tauschii 57 0.0 874
WERAM-Orl-0018 KN538711.1_FGP007 Oryza longistaminata 56 0.0 869
WERAM-Tra-0032 Traes_1DS_20D6E2B0D.1 Triticum aestivum 57 0.0 868
WERAM-Tru-0041 TRIUR3_19822-P1 Triticum urartu 59 0.0 852
WERAM-Sei-0064 Si016434m Setaria italica 73 0.0 791
WERAM-Amt-0041 ERN17369 Amborella trichopoda 43 6e-168 589
WERAM-Met-0165 KEH24644 Medicago truncatula 43 2e-166 584
WERAM-Prp-0030 EMJ21800 Prunus persica 42 1e-161 568
WERAM-Mua-0058 GSMUA_Achr3P14190_001 Musa acuminata 50 6e-135 479
WERAM-Viv-0065 VIT_10s0042g00830.t01 Vitis vinifera 46 9e-122 436
WERAM-Thc-0088 EOY14163 Theobroma cacao 44 7e-120 429
WERAM-Glm-0118 GLYMA10G43080.2 Glycine max 45 5e-117 420
WERAM-Sol-0064 Solyc04g049140.2.1 Solanum lycopersicum 42 3e-114 410
WERAM-Pot-0063 POPTR_0005s09360.1 Populus trichocarpa 43 1e-112 405
WERAM-Sot-0039 PGSC0003DMT400035505 Solanum tuberosum 44 3e-106 384
WERAM-Bro-0174 Bo9g038630.1 Brassica oleracea 42 8e-106 382
WERAM-Brr-0135 Bra027055.1-P Brassica rapa 42 1e-105 382
WERAM-Art-0023 AT1G62310.1 Arabidopsis thaliana 41 2e-104 378
WERAM-Arl-0004 Al_scaffold_0002_290 Arabidopsis lyrata 42 9e-104 375
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 41 8e-100 362
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 41 1e-36 153
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 41 1e-36 153
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 53 2e-36 152
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 41 3e-36 151
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 41 4e-36 151
WERAM-Pem-0063 ENSPMAP00000006992.1 Petromyzon marinus 50 5e-36 150
WERAM-Pof-0098 ENSPFOP00000008824.2 Poecilia formosa 52 1e-35 150
WERAM-Xim-0102 ENSXMAP00000009010.1 Xiphophorus maculatus 52 1e-35 149
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 52 1e-35 149
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 42 2e-35 149
WERAM-Orla-0053 ENSORLP00000006841.1 Oryzias latipes 52 2e-35 149
WERAM-Tub-0003 ENSTBEP00000000295.1 Tupaia belangeri 52 2e-35 149
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 52 2e-35 149
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 42 2e-35 149
WERAM-Ere-0095 ENSEEUP00000009792.1 Erinaceus europaeus 52 3e-35 148
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 52 3e-35 148
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 52 3e-35 148
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 52 3e-35 148
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 52 3e-35 148
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 52 3e-35 148
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 52 3e-35 148
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 52 3e-35 148
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 52 3e-35 148
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 52 3e-35 148
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 52 4e-35 148
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 52 4e-35 148
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 52 4e-35 148
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 52 4e-35 148
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 52 4e-35 148
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 52 4e-35 148
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 52 4e-35 148
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 52 4e-35 147
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 52 4e-35 147
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 52 4e-35 147
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 52 4e-35 147
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 52 4e-35 147
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 52 4e-35 147
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 52 5e-35 147
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 52 5e-35 147
WERAM-Soa-0091 ENSSARP00000008521.1 Sorex araneus 52 5e-35 147
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 52 6e-35 147
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 41 7e-35 147
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 41 7e-35 147
Created Date 25-Jun-2016