WERAM Information

Tag Content
WERAM ID WERAM-Sob-0041
Ensembl Protein ID Sb02g043960.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb02g043960 Sb02g043960.1 Sb02g043960.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.20e-13 51.8 505 608
Organism Sorghum bicolor
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                     +C +C +d+ +   ++ Cd+C+ +fH  Cv+l+    peg +w+CpsC+
  Sb02g043960.1 505 SVCSIC-NDGGD---LLLCDNCPSAFHHACVGLQ--ATPEG-DWFCPSCR 547
                    58****.55555...9******************..9****.*******8 PP
        PHD.txt   4 ClvCgkddegeke..........mvqCdeCddwfHlkCvklplsslpeg...........k 43 
                    C vCg +d++++           +++Cd+C++ +H+ Cv    s+ +e+           +
  Sb02g043960.1 548 CGVCGGSDFDATAaggggftdktIIYCDQCEREYHVGCVRRRGSEEEEEsaaewcrrpeeQ 608
                    99998888874445566666666******************96666644464445554441 PP
Protein Sequence
(Fasta)		MTKAAAPSKP WQPAALDAEF SPQVAQLLLT DHGRRELSSC LRRRDEALRM TVRKHLLALG 60
WTILSRPNAA MLTRLRYRAP GGYDAKSYCS LPDLVVDSAA ASQFEFEFEQ QEEEEDQIIT 120
VVNNNEPPPP PPQTKDEEDD DEEDGPAEPA EEEEQKEEDD DQDAVIAEYI ALMARNDGAS 180
RGRRAGRLRD GAKRHLLAAG WTFWTKLKSN GREELRYRAP TGRSYISLHT ACQAFKTSRR 240
QAALPMTTAS ASASSASNSS SSSSKIDRRR VHATPATILR AVRPSRVGDG DEDGGTIHCQ 300
PPVVMTIRKK RKLIGDGDAV NVTMKKIKKK ETCCQVVGAD GTQLIKKSIT TTTLTRKKRR 360
RKEATASKNQ TRVVLRPTNS TASACQRRSR TLLSVLIDKD IVVPRDKVTY RAARDRPAAK 420
DGFITGEGIR CTCCNKTLTV AEFAAHATAR RGSDRREAWA RVFLKDGRSL SQCLVELMRR 480
DVAVVAARNG DVRVKEKCSD PEGDSVCSIC NDGGDLLLCD NCPSAFHHAC VGLQATPEGD 540
WFCPSCRCGV CGGSDFDATA AGGGGFTDKT IIYCDQCERE YHVGCVRRRG SEEEEESAAE 600
WCRRPEEQEE WPWLCSPECG EVFRHLQGLA AVARERSIPI PTTVPTTVEG VSLSILRRRR 660
RRPISMVATG SGCQEEEEEE DAAEHGQLCS ALDVLHECFV TLIEPRTQTD LTADIVFNRE 720
SELRRLNFRG YYVVGLEKAG ELITVGTLRV LGTEVAELPL VGTRFAHRRQ GMCHLLVTEL 780
EKVLRQVGVR RLVLPAVPEL LPMWTASLGF HPMTRSDVME IAAEHAILSF QGTTMCHKSL 840
HLA 843
Nucleotide Sequence
(Fasta)		ATGACGAAGG CGGCCGCCCC TTCGAAACCA TGGCAGCCGG CGGCGCTGGA CGCCGAGTTC 60
TCGCCGCAGG TGGCCCAGCT GCTCCTGACG GACCACGGCC GCAGGGAGCT GTCCTCCTGC 120
CTACGCCGCA GAGACGAGGC CCTGAGGATG ACGGTCAGGA AGCACCTGCT GGCGCTGGGG 180
TGGACCATCC TGTCCAGGCC CAACGCCGCC ATGTTGACGA GGCTCCGCTA CAGGGCGCCA 240
GGAGGCTATG ACGCCAAGTC CTACTGCTCC CTTCCGGACC TCGTCGTCGA TAGCGCCGCC 300
GCCTCACAGT TTGAGTTTGA GTTTGAGCAG CAGGAGGAGG AGGAGGATCA GATTATTACT 360
GTTGTTAATA ATAACGAGCC TCCGCCTCCC CCGCCACAAA CCAAGGACGA GGAAGACGAT 420
GATGAGGAAG ATGGGCCTGC TGAGCCGGCG GAGGAGGAGG AGCAAAAAGA GGAAGATGAT 480
GACCAGGACG CCGTCATTGC CGAGTACATC GCGCTCATGG CGAGGAACGA CGGCGCCAGC 540
AGGGGCCGCA GGGCGGGCCG TCTCCGCGAC GGCGCCAAGA GGCACCTCCT GGCGGCCGGG 600
TGGACGTTCT GGACGAAGCT CAAGAGCAAC GGCAGAGAGG AGCTGCGCTA CAGGGCGCCC 660
ACCGGACGCT CCTACATCTC CCTCCACACT GCCTGCCAGG CCTTCAAGAC CAGCCGCCGG 720
CAAGCCGCGT TGCCGATGAC GACGGCCTCG GCCTCGGCTT CGTCGGCTTC CAACAGCAGC 780
AGCAGCAGCA GCAAGATTGA TAGACGCCGG GTGCATGCGA CTCCTGCCAC CATACTGCGT 840
GCTGTGCGCC CCAGCAGGGT CGGAGACGGA GACGAAGACG GCGGCACCAT CCATTGCCAG 900
CCGCCGGTTG TGATGACGAT CAGGAAGAAA AGGAAACTAA TCGGCGACGG CGACGCCGTG 960
AACGTGACGA TGAAGAAAAT CAAGAAGAAG GAGACGTGCT GTCAAGTGGT GGGCGCTGAT 1020
GGCACGCAGC TCATCAAGAA ATCCATCACC ACGACCACCC TGACCAGGAA GAAGAGGAGG 1080
AGGAAGGAAG CAACCGCCTC CAAGAACCAA ACGCGCGTAG TCCTACGGCC CACCAACAGC 1140
ACGGCGTCGG CGTGCCAGCG TCGCTCGCGG ACGCTCCTGT CCGTGCTCAT CGACAAGGAC 1200
ATCGTGGTGC CGAGGGACAA GGTGACGTAC AGGGCGGCGA GGGACAGGCC GGCGGCCAAG 1260
GACGGTTTCA TCACCGGCGA GGGGATCAGA TGCACGTGCT GCAACAAGAC CTTGACGGTG 1320
GCAGAGTTCG CGGCACACGC CACCGCACGC CGGGGGAGCG ACCGCCGTGA GGCCTGGGCA 1380
CGTGTGTTCC TCAAGGACGG CAGGTCGCTG TCGCAGTGCC TGGTGGAGCT CATGAGGCGC 1440
GACGTGGCCG TCGTCGCGGC TCGGAATGGC GACGTGAGGG TGAAGGAGAA ATGCAGCGAC 1500
CCGGAGGGCG ACTCGGTGTG CTCCATCTGC AACGACGGCG GCGATCTGCT CCTCTGCGAC 1560
AACTGCCCGT CGGCGTTCCA CCACGCCTGC GTTGGGCTGC AGGCCACTCC GGAGGGCGAC 1620
TGGTTCTGTC CGTCGTGCAG ATGCGGCGTG TGCGGCGGCA GCGACTTCGA TGCCACCGCC 1680
GCTGGTGGTG GTGGGTTCAC GGACAAGACC ATCATCTACT GCGACCAATG CGAGCGTGAA 1740
TATCATGTGG GATGCGTGAG ACGACGAGGT TCCGAGGAGG AGGAAGAAAG CGCAGCAGAG 1800
TGGTGCCGGC GACCAGAGGA ACAAGAAGAA TGGCCGTGGC TTTGCAGTCC TGAATGCGGC 1860
GAGGTATTTC GGCATCTGCA GGGACTTGCT GCGGTGGCCA GGGAAAGATC CATCCCCATC 1920
CCCACTACAG TCCCCACTAC AGTAGAAGGC GTGTCGCTCA GCATCCTGCG GCGGCGGCGG 1980
CGACGACCCA TCTCCATGGT CGCCACGGGG TCTGGGTGTC AGGAGGAAGA GGAGGAGGAG 2040
GACGCCGCCG AGCACGGGCA GCTGTGCTCC GCGCTGGACG TGCTCCACGA GTGCTTCGTG 2100
ACCCTGATCG AGCCCCGTAC GCAGACGGAC CTCACCGCCG ACATCGTCTT CAACCGAGAG 2160
TCAGAGCTGC GCCGCCTCAA CTTCCGCGGG TACTACGTGG TGGGCCTGGA GAAAGCCGGC 2220
GAGCTCATCA CCGTGGGGAC GCTGCGGGTG TTGGGGACCG AGGTGGCAGA GCTGCCTCTG 2280
GTGGGCACCC GGTTCGCGCA CCGCCGGCAG GGGATGTGCC ACCTCCTCGT CACGGAGCTC 2340
GAGAAGGTGC TGCGTCAGGT GGGCGTCCGC AGGCTGGTGC TGCCCGCCGT GCCTGAGCTC 2400
CTGCCCATGT GGACCGCCTC TCTGGGCTTC CACCCCATGA CCCGCTCCGA CGTCATGGAG 2460
ATCGCCGCGG AGCACGCCAT CCTGAGCTTC CAGGGAACCA CCATGTGCCA CAAGAGTCTG 2520
CACCTTGCCT AG 2533
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0139 GRMZM2G434715_P01 Zea mays 61 2e-156 550
WERAM-Sei-0122 Si032140m Setaria italica 57 8e-131 465
WERAM-Tra-0147 Traes_4BL_F428A5CDC.1 Triticum aestivum 52 2e-114 411
WERAM-Tru-0037 TRIUR3_18780-P1 Triticum urartu 51 3e-112 404
WERAM-Aet-0069 EMT23788 Aegilops tauschii 51 8e-112 402
WERAM-Orm-0079 OMERI07G23850.1 Oryza meridionalis 51 2e-107 387
WERAM-Orb-0084 OBART07G27320.1 Oryza barthii 50 2e-104 377
WERAM-Org-0083 ORGLA07G0217500.1 Oryza glaberrima 50 5e-104 376
WERAM-Orr-0087 ORUFI07G28300.1 Oryza rufipogon 50 2e-103 374
WERAM-Orgl-0081 OGLUM07G27340.1 Oryza glumaepatula 50 9e-103 372
WERAM-Lep-0083 LPERR07G24100.1 Leersia perrieri 43 4e-85 313
WERAM-Mua-0147 GSMUA_AchrUn_randomP01500_001 Musa acuminata 40 3e-83 307
WERAM-Prp-0127 EMJ08257 Prunus persica 40 6e-82 303
WERAM-Amt-0093 ERN04860 Amborella trichopoda 40 1e-78 292
WERAM-Sol-0044 Solyc03g071550.1.1 Solanum lycopersicum 38 6e-77 286
WERAM-Sot-0068 PGSC0003DMT400056775 Solanum tuberosum 39 2e-75 281
WERAM-Met-0133 AES98667 Medicago truncatula 39 7e-75 279
WERAM-Arl-0028 fgenesh1_pg.C_scaffold_8001866 Arabidopsis lyrata 40 1e-74 279
WERAM-Glm-0016 GLYMA02G39300.2 Glycine max 39 2e-74 278
WERAM-Thc-0093 EOY15722 Theobroma cacao 39 2e-71 268
WERAM-Pot-0028 POPTR_0002s11940.1 Populus trichocarpa 36 5e-68 256
WERAM-Sem-0001 EFJ24916 Selaginella moellendorffii 37 5e-67 253
WERAM-Hov-0067 MLOC_58085.2 Hordeum vulgare 47 2e-65 248
WERAM-Viv-0024 VIT_05s0020g03420.t01 Vitis vinifera 34 3e-61 234
WERAM-Orp-0069 OPUNC07G04530.3 Oryza punctata 35 4e-61 234
WERAM-Ori-0082 BGIOSGA025231-PA Oryza indica 34 7e-60 229
WERAM-Orni-0071 ONIVA07G03330.1 Oryza nivara 35 9e-60 229
WERAM-Orl-0111 KN542919.1_FGP001 Oryza longistaminata 34 9e-60 229
WERAM-Orbr-0080 OB07G13580.1 Oryza brachyantha 34 1e-59 229
WERAM-Bro-0088 Bo5g005570.1 Brassica oleracea 31 2e-58 225
WERAM-Art-0071 AT3G14980.1 Arabidopsis thaliana 30 1e-56 219
WERAM-Brd-0130 BRADI5G27517.1 Brachypodium distachyon 32 4e-56 217
WERAM-Brr-0136 Bra027290.1-P Brassica rapa 31 6e-55 213
WERAM-Ors-0046 OS04T0691700-01 Oryza sativa 31 6e-40 163
WERAM-Php-0118 PP1S59_348V6.1 Physcomitrella patens 38 9e-35 146
WERAM-Cym-0028 CMR472CT Cyanidioschyzon merolae 56 2e-11 68.9
WERAM-Drm-0021 FBpp0074766 Drosophila melanogaster 50 2e-10 65.5
WERAM-Orla-0061 ENSORLP00000007931.1 Oryzias latipes 40 2e-09 62.4
WERAM-Cii-0053 ENSCINP00000025830.2 Ciona intestinalis 56 3e-09 61.6
WERAM-Mod-0169 ENSMODP00000022561.3 Monodelphis domestica 41 4e-09 61.2
WERAM-Cis-0034 ENSCSAVP00000007438.1 Ciona savignyi 53 4e-09 61.2
WERAM-Chh-0003 ENSCHOP00000000249.1 Choloepus hoffmanni 41 4e-09 61.2
WERAM-Cap-0103 ENSCPOP00000007645.2 Cavia porcellus 41 4e-09 61.2
WERAM-Ova-0075 ENSOARP00000007963.1 Ovis aries 41 5e-09 61.2
WERAM-Sah-0167 ENSSHAP00000017758.1 Sarcophilus harrisii 41 5e-09 61.2
WERAM-Ocp-0036 ENSOPRP00000003260.1 Ochotona princeps 41 5e-09 60.8
WERAM-Mup-0195 ENSMPUP00000016754.1 Mustela putorius furo 41 5e-09 60.8
WERAM-Caf-0156 ENSCAFP00000022067.4 Canis familiaris 41 5e-09 60.8
WERAM-Ict-0076 ENSSTOP00000006839.2 Ictidomys tridecemlineatus 41 5e-09 60.8
WERAM-Fec-0075 ENSFCAP00000006385.3 Felis catus 41 5e-09 60.8
Created Date 25-Jun-2016