WERAM Information

Tag Content
WERAM ID WERAM-Sob-0017
Ensembl Protein ID Sb02g004100.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb02g004100 Sb02g004100.1 Sb02g004100.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.80e-10 41 735 810
Organism Sorghum bicolor
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsC 50 
                    ++C +C  d+ +   +v+Cd+C   fHl+C++++   lp+g +wyC+sC
  Sb02g004100.1 735 DTCAIC-GDGGD---LVCCDHCASTFHLDCLGIK---LPSG-DWYCRSC 775
                    58****.44444...9******************...****.******* PP
        PHD.txt   3 iClvCg..kddegeke....mvqCdeCddwfHlkCvk 33 
                    +C++Cg  +  e+ +     ++ C +C++ +H++C +
  Sb02g004100.1 776 LCRFCGfpQ--EKPSSspelLLSCLQCSRKYHQTCSS 810
                    599**8542..331112456***************75 PP
Protein Sequence
(Fasta)		MESSDSEDDE FCISTRQNAS GAASVGNAGA GSQGGGDQSG EKPVTASPEK VSGVKSSGGD 60
GLEKKTGVEL ESSSSQPAAK RIRVETVHGD GSGRSGGASK SGTGGKMLPR GLPTWRFERP 120
EVRGGRVLDD KGGVVGMKAS SASKMKEQAS SLGDKRRHVE LQKHERRAPL KTDQGKSIDS 180
GQHEVLRLQG KRGVLRILPK HDKVARDTGG GKILSRQTEV DVETGKCRIP TKSGVLKLLP 240
KNNGAAMESN DCKLMSKKVN KVDEETGDDK MPMKNTKVVD KETSDGKTLA IKTKLDGEFG 300
GHKVPMKNST VDMETVTEKF QHRNSKADGE TKERYKGYEE KSGAPAEFRK QDANGEKRVV 360
GKLLSPVALR KSDPSVVGVS LGPKMKQQSS KQQLKNYSLS LKDDSTKPSE QKNLKKRLLE 420
HKGSSESLSK KAQSKAVDLQ GTSGPVLNKL GMKKPRGGPL YTHKQDLRNK IKRVLLDNGW 480
KIDLRQRKNK DYEDSVYVSP AGVGYWSITK AYAVFQEQFQ NMGRSSKLNN TKPGASDAIS 540
KDDLALLKKN IVKRRTNKEI CSAEKKPGVS RNRSRSSKDI LANRGSRNKH QNKEDRVKDR 600
RCGLLVRGST HDAEDNMDGY IPYEWKRTVY SWMIDLGVVS EDMQVKYMNN NRTREMLAGK 660
ITREGIFCGC CSKILTVGKF ELHAGSKEKK PYANIFLEGG KVSLLQCLLD AWEKHTLCEN 720
KGFYKIDKGE DEHDDTCAIC GDGGDLVCCD HCASTFHLDC LGIKLPSGDW YCRSCLCRFC 780
GFPQEKPSSS PELLLSCLQC SRKYHQTCSS GTGTDFDCTI PGTSIDCFCS PGCRKIYKRL 840
NKLLGIKNHM EAGFSWSLVH CFPNDQAMPP KNKEKMAQCN SKIALAFTVL DECFQPHIDE 900
RSGINMIHNV AYNCGSDFSR LDFSGFYAFI LERGDEVISA ASVRIHGTDL AEMPFIGTRG 960
MYRHQGMLRR LLNGIESALC SLNVQKLVVS AVTEMENTWT TVFGFKPVQP SKKQRIKSLN 1020
LLIMNGTGLL EKRLLQTQTV DGQITTKTAN TVGSNKMDAK MLGEASGSVT PVHVSSVHDA 1080
ADNLEIKRHE SSHPLGNSAG STLDESPAAE ENEAKKTIER TFSVSIGDGK TVKLHTLPGA 1140
NCGVNMQCMA EAENIQEEKY KETNGRSIAE NTISEQKCED KSNSSHSNSF ATPVTVDQYS 1200
CLSNEIGKGE NCLSSELSVG AAPITGKTES NLTSVHRANQ EDEKAYAAPV DTKIPSAIMD 1260
ENPDKHEFKT MVVGYSQISM EAKSLEDKTA IVNGTSMDAY RDKGTNEDHS ASAVDNGISV 1320
KLYVQQMEII EDKTGSLLPD LKHSSSCEDM LVTLTESKSL KKDMVEINDA TIKVGMAGES 1380
FNEAGITAPM LNISDAVGEN VVKPTQTCGE GQLRGEDIIY SNNSMEDDLA SREPVNA 1437
Nucleotide Sequence
(Fasta)		ATGGAGTCCA GCGACTCCGA GGATGACGAG TTCTGCATCT CCACGCGGCA GAATGCTAGT 60
GGTGCCGCGT CGGTGGGCAA TGCCGGTGCC GGCAGCCAAG GTGGTGGCGA TCAGTCGGGG 120
GAGAAACCCG TGACTGCTAG TCCTGAGAAG GTTTCAGGGG TTAAGTCCAG TGGTGGAGAT 180
GGTTTAGAGA AGAAAACGGG AGTTGAGCTG GAGAGTAGTA GTTCGCAGCC CGCTGCCAAG 240
AGGATCAGAG TTGAGACTGT TCATGGTGAT GGCAGTGGAC GTAGTGGAGG TGCATCTAAG 300
AGTGGAACTG GGGGGAAAAT GCTGCCCCGG GGGCTCCCGA CATGGCGGTT TGAGAGGCCA 360
GAGGTAAGGG GAGGGCGTGT TTTGGATGAC AAAGGTGGGG TGGTGGGCAT GAAGGCAAGC 420
AGCGCCTCAA AGATGAAGGA GCAAGCATCT AGTTTGGGTG ACAAGAGGAG ACACGTGGAG 480
CTGCAGAAAC ATGAAAGACG GGCGCCATTG AAAACTGATC AGGGCAAATC CATTGATTCT 540
GGCCAACATG AGGTTTTAAG GTTGCAAGGG AAAAGGGGTG TTTTAAGGAT ATTGCCAAAG 600
CATGACAAGG TGGCCAGGGA TACTGGTGGT GGTAAGATTC TGTCGAGGCA AACTGAGGTG 660
GATGTGGAGA CTGGTAAATG TAGGATTCCA ACAAAGAGTG GTGTTTTAAA GCTCCTGCCG 720
AAGAACAATG GTGCGGCGAT GGAGAGTAAT GATTGCAAGC TTATGTCCAA GAAGGTTAAT 780
AAGGTGGATG AGGAAACTGG GGATGACAAG ATGCCAATGA AGAACACCAA GGTGGTTGAT 840
AAGGAAACCA GTGATGGCAA GACCCTTGCA ATTAAAACTA AGTTGGATGG AGAGTTTGGT 900
GGCCACAAGG TACCAATGAA GAACTCTACC GTGGACATGG AAACTGTTAC TGAGAAGTTT 960
CAGCACAGGA ACAGCAAGGC AGATGGAGAA ACCAAAGAGA GATATAAAGG ATATGAAGAG 1020
AAAAGTGGTG CCCCTGCAGA ATTTCGGAAG CAGGATGCAA ATGGTGAGAA GAGAGTTGTG 1080
GGAAAGCTAC TCTCTCCTGT TGCGCTGAGG AAAAGTGATC CAAGCGTAGT GGGAGTTTCT 1140
TTGGGCCCGA AAATGAAACA ACAAAGTTCA AAGCAACAAT TGAAGAACTA TTCTCTGAGC 1200
TTGAAAGATG ATAGCACTAA ACCAAGTGAA CAGAAGAATC TGAAAAAGCG ATTGCTTGAG 1260
CATAAAGGGT CGTCAGAGAG TTTGTCAAAG AAGGCACAAT CGAAAGCTGT TGATCTGCAA 1320
GGCACATCTG GCCCTGTGCT CAACAAGCTT GGAATGAAGA AGCCAAGGGG AGGACCCCTC 1380
TACACACACA AGCAGGATCT CAGGAACAAG ATAAAACGTG TGCTTTTAGA TAATGGGTGG 1440
AAAATTGACT TAAGGCAGAG GAAAAACAAA GATTATGAAG ACTCAGTCTA TGTTTCTCCT 1500
GCCGGGGTTG GCTATTGGTC AATCACTAAG GCTTATGCAG TTTTCCAAGA ACAGTTTCAA 1560
AATATGGGCC GCTCATCTAA ACTTAATAAT ACTAAACCAG GTGCTTCAGA TGCCATATCG 1620
AAGGATGATC TAGCATTGCT AAAAAAGAAT ATAGTTAAGA GAAGGACTAA TAAAGAAATC 1680
TGTAGCGCTG AAAAGAAACC TGGGGTTAGC AGAAACAGAA GCAGAAGCTC AAAAGATATC 1740
CTTGCTAATA GAGGTTCTAG AAACAAGCAT CAGAACAAGG AGGATAGGGT AAAAGATCGG 1800
AGGTGTGGGC TTCTTGTCCG CGGGAGTACC CATGATGCAG AAGATAACAT GGATGGCTAT 1860
ATTCCATATG AATGGAAGCG TACAGTATAT TCATGGATGA TAGATCTGGG GGTTGTTTCT 1920
GAAGACATGC AGGTCAAATA CATGAACAAC AATAGAACCA GGGAAATGTT GGCAGGTAAA 1980
ATTACCAGGG AGGGTATTTT CTGTGGGTGC TGTTCCAAGA TTCTCACAGT AGGGAAGTTT 2040
GAACTTCATG CTGGTTCAAA AGAGAAGAAG CCCTATGCAA ACATCTTTCT GGAAGGTGGT 2100
AAGGTATCTT TGTTGCAATG CTTACTTGAT GCATGGGAGA AGCACACACT ATGTGAAAAT 2160
AAGGGATTTT ACAAGATAGA TAAGGGCGAG GATGAACATG ATGATACTTG TGCTATTTGT 2220
GGGGATGGTG GTGATTTGGT GTGCTGTGAT CACTGTGCTT CCACTTTTCA TTTGGATTGC 2280
TTGGGAATTA AGCTCCCCTC TGGCGATTGG TATTGTCGCA GCTGTTTATG TAGGTTCTGC 2340
GGTTTTCCCC AAGAAAAGCC ATCATCTTCT CCTGAGTTGT TACTTTCTTG TTTGCAATGT 2400
TCAAGGAAAT ATCACCAAAC TTGTTCATCT GGAACTGGGA CAGACTTTGA TTGTACCATA 2460
CCTGGCACCT CTATTGATTG CTTTTGCAGT CCAGGATGTA GAAAGATTTA TAAACGACTA 2520
AACAAGCTTC TTGGGATAAA GAATCATATG GAGGCTGGAT TTTCGTGGAG TCTGGTTCAC 2580
TGTTTTCCTA ATGATCAGGC CATGCCCCCC AAAAATAAAG AAAAAATGGC ACAGTGCAAC 2640
TCCAAGATAG CCCTCGCTTT CACAGTTCTG GATGAGTGCT TTCAGCCACA CATTGACGAG 2700
AGAAGTGGAA TTAATATGAT TCACAATGTT GCATATAATT GTGGTTCTGA TTTCAGTCGT 2760
TTAGACTTCA GTGGTTTCTA TGCATTTATC CTGGAACGGG GTGATGAAGT AATATCAGCG 2820
GCATCTGTAA GGATTCATGG AACTGATTTA GCGGAAATGC CATTCATAGG CACAAGAGGC 2880
ATGTATAGGC ACCAAGGGAT GTTGCGTCGG CTACTGAATG GAATTGAATC GGCCCTTTGT 2940
TCCCTTAATG TTCAGAAACT AGTAGTATCT GCTGTGACTG AAATGGAGAA TACTTGGACA 3000
ACTGTTTTTG GTTTTAAGCC TGTTCAACCT TCCAAGAAAC AAAGAATCAA GTCGTTAAAT 3060
CTCTTGATTA TGAATGGGAC CGGTCTACTA GAGAAGAGGT TGCTGCAAAC ACAAACAGTT 3120
GATGGACAGA TCACTACCAA GACAGCTAAT ACTGTTGGAT CTAATAAGAT GGATGCTAAA 3180
ATGCTTGGTG AAGCAAGTGG ATCTGTGACA CCTGTTCATG TTTCTAGTGT ACATGATGCC 3240
GCTGACAATC TTGAAATTAA GCGTCATGAG AGTTCTCATC CTTTAGGAAA CTCTGCAGGC 3300
TCGACATTGG ATGAGTCTCC TGCTGCAGAA GAAAATGAAG CGAAAAAAAC TATAGAAAGG 3360
ACATTTTCGG TATCCATAGG TGATGGTAAG ACAGTTAAGT TGCATACACT TCCTGGAGCT 3420
AATTGTGGAG TCAACATGCA GTGCATGGCT GAAGCAGAAA ACATTCAAGA AGAGAAATAC 3480
AAAGAAACCA ATGGGAGATC GATTGCTGAA AATACTATCT CAGAACAGAA GTGTGAAGAT 3540
AAATCTAATT CCAGCCATTC AAATTCATTT GCTACTCCGG TGACTGTGGA TCAATATTCT 3600
TGTTTATCTA ATGAGATTGG GAAAGGTGAA AACTGTTTAT CTAGTGAACT TTCTGTTGGA 3660
GCTGCTCCCA TAACAGGCAA AACTGAATCT AATTTGACAT CTGTCCATCG TGCTAATCAA 3720
GAGGATGAGA AAGCTTACGC AGCTCCTGTG GACACTAAAA TACCTTCAGC CATTATGGAT 3780
GAAAATCCTG ATAAGCATGA ATTTAAAACT ATGGTTGTAG GATATAGTCA AATCTCAATG 3840
GAAGCTAAAA GCTTGGAAGA TAAGACTGCT ATTGTAAATG GAACCTCAAT GGATGCCTAT 3900
AGAGATAAAG GTACTAATGA AGATCACAGT GCTTCTGCAG TTGACAATGG AATATCTGTG 3960
AAGTTATATG TTCAGCAAAT GGAGATTATT GAGGACAAAA CTGGCTCACT TTTACCAGAT 4020
TTGAAACACT CTTCTAGTTG TGAAGATATG TTGGTGACCT TGACCGAGTC AAAGTCACTT 4080
AAAAAGGATA TGGTTGAAAT CAATGATGCA ACTATTAAGG TAGGAATGGC TGGTGAGAGT 4140
TTCAATGAAG CAGGAATAAC AGCTCCCATG CTCAACATTT CAGATGCTGT TGGTGAAAAT 4200
GTGGTTAAGC CTACTCAAAC TTGTGGGGAG GGTCAACTTC GTGGAGAGGA TATCATATAC 4260
AGTAATAACA GCATGGAAGA TGACCTAGCT TCTAGAGAAC CTGTTAATGC ATGA 4315
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sei-0098 Si028686m Setaria italica 71 0.0 1856
WERAM-Zem-0135 GRMZM2G412492_P01 Zea mays 90 0.0 1640
WERAM-Lep-0071 LPERR07G04130.1 Leersia perrieri 52 0.0 1292
WERAM-Orbr-0080 OB07G13580.1 Oryza brachyantha 52 0.0 1283
WERAM-Orp-0069 OPUNC07G04530.3 Oryza punctata 53 0.0 1276
WERAM-Orgl-0070 OGLUM07G04140.1 Oryza glumaepatula 53 0.0 1265
WERAM-Orni-0071 ONIVA07G03330.1 Oryza nivara 53 0.0 1263
WERAM-Org-0072 ORGLA07G0040300.1 Oryza glaberrima 53 0.0 1261
WERAM-Orr-0074 ORUFI07G04440.1 Oryza rufipogon 53 0.0 1259
WERAM-Orm-0068 OMERI07G03260.1 Oryza meridionalis 53 0.0 1256
WERAM-Orl-0111 KN542919.1_FGP001 Oryza longistaminata 54 0.0 1203
WERAM-Tru-0097 TRIUR3_33650-P1 Triticum urartu 51 0.0 1200
WERAM-Aet-0042 EMT29012 Aegilops tauschii 51 0.0 1184
WERAM-Tra-0100 Traes_2DS_F7E8E6B22.1 Triticum aestivum 51 0.0 1162
WERAM-Ori-0082 BGIOSGA025231-PA Oryza indica 54 0.0 1014
WERAM-Hov-0022 MLOC_17175.1 Hordeum vulgare 52 0.0 689
WERAM-Mua-0076 GSMUA_Achr4P21300_001 Musa acuminata 53 5e-175 613
WERAM-Viv-0024 VIT_05s0020g03420.t01 Vitis vinifera 44 2e-153 541
WERAM-Met-0033 KEH43887 Medicago truncatula 43 3e-150 531
WERAM-Glm-0011 GLYMA01G44885.1 Glycine max 42 5e-148 523
WERAM-Art-0101 AT4G14920.1 Arabidopsis thaliana 42 2e-138 491
WERAM-Thc-0054 EOY05682 Theobroma cacao 50 2e-137 488
WERAM-Prp-0110 EMJ25684 Prunus persica 53 4e-136 484
WERAM-Bro-0088 Bo5g005570.1 Brassica oleracea 39 1e-135 482
WERAM-Sol-0114 Solyc09g076010.2.1 Solanum lycopersicum 50 7e-130 463
WERAM-Amt-0036 ERN16161 Amborella trichopoda 43 2e-108 391
WERAM-Brr-0108 Bra020653.1-P Brassica rapa 43 5e-105 380
WERAM-Pot-0096 POPTR_0008s15200.1 Populus trichocarpa 43 1e-103 375
WERAM-Brd-0130 BRADI5G27517.1 Brachypodium distachyon 40 7e-92 337
WERAM-Orb-0048 OBART04G30730.1 Oryza barthii 38 1e-86 319
WERAM-Sot-0081 PGSC0003DMT400067527 Solanum tuberosum 36 1e-85 316
WERAM-Sem-0133 EFJ35658 Selaginella moellendorffii 39 1e-84 312
WERAM-Arl-0059 fgenesh2_kg.3__ 1623__ AT3G14980.1 Arabidopsis lyrata 37 7e-83 307
WERAM-Ors-0046 OS04T0691700-01 Oryza sativa 44 3e-73 275
WERAM-Php-0118 PP1S59_348V6.1 Physcomitrella patens 45 1e-50 199
WERAM-Cym-0028 CMR472CT Cyanidioschyzon merolae 30 1e-12 73.9
WERAM-Eqc-0088 ENSECAP00000010777.1 Equus caballus 54 8e-11 67.8
WERAM-Pof-0154 ENSPFOP00000012650.2 Poecilia formosa 47 1e-10 67.0
WERAM-Orn-0079 ENSONIP00000008816.1 Oreochromis niloticus 45 2e-10 66.6
WERAM-Loa-0071 ENSLAFP00000005334.3 Loxodonta africana 48 2e-10 66.2
WERAM-Tar-0095 ENSTRUP00000018903.1 Takifugu rubripes 46 2e-10 66.2
WERAM-Lac-0068 ENSLACP00000009098.1 Latimeria chalumnae 47 3e-10 66.2
WERAM-Orc-0212 ENSOCUP00000018080.1 Oryctolagus cuniculus 27 3e-10 65.9
WERAM-Gog-0183 ENSGGOP00000016037.2 Gorilla gorilla 45 3e-10 65.9
WERAM-Ten-0050 ENSTNIP00000006981.1 Tetraodon nigroviridis 41 3e-10 65.9
WERAM-Fec-0089 ENSFCAP00000007349.3 Felis catus 54 3e-10 65.9
WERAM-Dan-0198 ENSDNOP00000024300.1 Dasypus novemcinctus 46 3e-10 65.9
WERAM-Asm-0192 ENSAMXP00000018335.1 Astyanax mexicanus 50 3e-10 65.9
WERAM-Ptv-0176 ENSPVAP00000015426.1 Pteropus vampyrus 46 3e-10 65.9
WERAM-Dar-0054 ENSDARP00000127601.1 Danio rerio 46 4e-10 65.5
WERAM-Nol-0104 ENSNLEP00000011902.1 Nomascus leucogenys 46 4e-10 65.5
WERAM-Dio-0100 ENSDORP00000010071.1 Dipodomys ordii 46 4e-10 65.5
Created Date 25-Jun-2016