WERAM Information

Tag Content
WERAM ID WERAM-Pot-0096
Ensembl Protein ID POPTR_0008s15200.1
Gene Name POPTR_0008s15200g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0008s15200 POPTR_0008s15200.1 POPTR_0008s15200.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 3.90e-09 37.7 688 768
Organism Populus trichocarpa
Domain Profile
  Me_Reader PHD
             PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                         ++C +C  d+ +   +++Cd+C+  fH++C++++   lp g +w+Cp+C+
  POPTR_0008s15200.1 688 DTCGLC-GDGGD---LMCCDGCPSTFHQSCLDIK--MLPPG-DWHCPNCT 730
                         579999.44444...9******************..*****.*******8 PP
             PHD.txt   4 ClvCg....kddegeke........mvqCdeCddwfHlkCvk 33 
                         C +Cg    k   +  +        ++ C+ C + +H +C++
  POPTR_0008s15200.1 731 CKFCGiasdK---N-AQgddttvskLLTCSLCVKKYHSSCTQ 768
                         8999753322...2.222445677899*************87 PP
Protein Sequence
(Fasta)		MEEGRRSGDP SGYIVKNRSS SGCLIVRKKG NDGVGGAGSS GSHKVFESKK EKKRLRVEYS 60
DSGSSDELLM PPRRRVGPET SRACNGLSGY EESYTGRKRS RGEDIRRNEV GLIGRNGGDL 120
SERKRNKLDM FGFDEYDGNG LEMSRRQQFD DGGIEGRGYF RPMMPGRSGI AREYESGSSR 180
HAVIDRRKSS YFERSSGPSQ GGDMVGARSS LSFLRDSYDS DEPIRVQGKN GVLKVMVNKK 240
KKVGGYLNSY DLLEAEGNRK VLRAEESVKK NVLIRPPVYS DPKSLDKAGS VSRTEKNAMN 300
MKKSVSTKNG KVSDRNSEDS ETLLKLGPKK VEAHNPMKTP LATKKSKDLD MDSDDSDASL 360
KPGPKHEGKK AGDKQGTSSE GEKTPYNQHP ETRIKEGKVK RGSGTEKQKL RERIREMLLN 420
SGWTIDYRPR RNRDYLDAVY INPTGTAYWS IIKAYDALLK QLDEVEARSR GDGSPFTPLS 480
NDVLSQLTRK TKKKIEKELK RKKRDVSDSE DARETTVRKS STRYDEESLD SGSREEKLSS 540
FVKQVGNKSR KLGRCMLLVR NSNEGTFLDG DGFVPYSGKR TLLSWLIDCG TVQLSEKVCY 600
MNRRRTKVML EGWLTRDGIH CGCCSKILTV SKFEIHAGSK LRQPFQNIYL DSGVSLLDCQ 660
IEAWNRQESV KRLGFQAVDI DGNDPNDDTC GLCGDGGDLM CCDGCPSTFH QSCLDIKMLP 720
PGDWHCPNCT CKFCGIASDK NAQGDDTTVS KLLTCSLCVK KYHSSCTQEF DALSIDTNSP 780
VARFCEKKCR ELFEQLQKYL GVKHELDAGF SWSLIHRVDA DSDASLQGLP QRVECNSKLA 840
VSLSVMDECF LPVVDRRSGI NLIQNVLYNC G 871
Nucleotide Sequence
(Fasta)		ATGGAAGAGG GAAGGAGATC TGGTGACCCA TCTGGGTATA TAGTGAAGAA TAGGAGTTCT 60
TCAGGTTGTT TGATTGTGAG AAAGAAAGGT AATGATGGTG TGGGAGGTGC GGGGTCTTCT 120
GGTTCACACA AGGTTTTTGA GTCAAAGAAA GAGAAAAAGA GGCTTAGGGT GGAATACAGT 180
GATTCAGGGT CTAGTGACGA GTTGTTAATG CCACCGCGTA GAAGGGTAGG CCCTGAAACA 240
TCGAGGGCAT GTAATGGTTT GAGTGGTTAT GAAGAGAGTT ATACTGGCAG GAAGAGAAGC 300
AGAGGGGAGG ATATTAGGCG TAACGAGGTT GGTTTGATTG GTAGGAATGG GGGGGATTTG 360
AGTGAAAGGA AGAGGAATAA GTTGGATATG TTTGGGTTTG ATGAGTATGA TGGGAATGGC 420
TTGGAAATGT CGAGGAGGCA GCAGTTTGAT GATGGTGGAA TTGAAGGGAG GGGGTATTTC 480
AGGCCGATGA TGCCAGGGAG AAGCGGCATT GCAAGGGAAT ATGAGTCAGG CTCCAGTAGG 540
CATGCTGTTA TTGATAGAAG AAAGAGTTCA TATTTTGAGA GGTCAAGTGG GCCAAGTCAG 600
GGAGGTGATA TGGTTGGAGC TCGGTCATCT TTGTCGTTTT TGAGGGATAG TTATGATTCT 660
GATGAACCCA TTCGGGTTCA GGGGAAAAAT GGTGTTTTAA AGGTGATGGT CAACAAGAAA 720
AAGAAGGTTG GTGGGTATTT GAATAGTTAT GATCTTTTGG AAGCTGAGGG AAATAGAAAG 780
GTTTTGAGAG CAGAGGAATC TGTGAAGAAG AATGTTCTAA TTCGTCCTCC TGTCTACTCT 840
GATCCTAAAA GCCTTGATAA AGCTGGTTCA GTTTCTAGGA CAGAGAAGAA TGCTATGAAT 900
ATGAAGAAAT CGGTGTCAAC TAAGAATGGT AAAGTCAGTG ATAGGAATTC AGAAGACAGT 960
GAGACATTGT TGAAGTTGGG ACCGAAGAAA GTTGAAGCTC ACAATCCTAT GAAGACACCA 1020
TTGGCAACAA AGAAAAGCAA GGACCTTGAC ATGGATTCTG ATGACAGTGA TGCATCTTTA 1080
AAGCCGGGAC CAAAGCACGA AGGCAAAAAA GCAGGGGACA AGCAGGGGAC AAGCAGTGAA 1140
GGTGAAAAAA CCCCTTACAA CCAGCACCCA GAAACTAGAA TCAAAGAAGG AAAAGTTAAG 1200
CGAGGTAGTG GCACGGAAAA ACAGAAGTTG CGAGAACGGA TAAGGGAGAT GCTTCTGAAT 1260
TCAGGCTGGA CAATAGACTA CAGGCCTAGA AGGAACAGAG ACTACCTCGA TGCAGTTTAT 1320
ATAAATCCTA CTGGAACAGC TTACTGGTCC ATAATCAAGG CATATGATGC CCTTCTAAAG 1380
CAATTAGATG AGGTTGAGGC AAGATCCAGA GGTGATGGCT CTCCTTTTAC GCCTCTATCA 1440
AATGACGTGC TCAGCCAACT AACAAGGAAG ACAAAAAAGA AGATTGAGAA AGAATTGAAA 1500
AGGAAGAAAA GAGATGTCAG CGACAGCGAG GATGCAAGAG AAACTACTGT AAGAAAGTCA 1560
AGTACCAGGT ATGATGAGGA GAGCCTGGAC AGTGGTAGCC GTGAAGAGAA ACTAAGCTCC 1620
TTTGTAAAGC AGGTTGGAAA TAAAAGTAGA AAACTGGGCA GATGTATGTT GTTGGTACGG 1680
AATTCTAATG AGGGCACATT CCTGGATGGT GATGGATTTG TTCCATATTC GGGGAAACGG 1740
ACACTCCTCT CCTGGTTGAT TGACTGTGGA ACTGTGCAGT TGAGTGAAAA GGTGTGCTAC 1800
ATGAATCGTC GACGAACAAA AGTGATGCTG GAAGGGTGGC TTACAAGAGA TGGAATTCAT 1860
TGTGGTTGCT GCAGCAAAAT CCTCACAGTA TCGAAGTTTG AGATCCATGC AGGGAGCAAA 1920
CTGCGCCAGC CATTTCAAAA TATATATCTA GACTCTGGTG TTTCTCTTTT GGACTGCCAG 1980
ATTGAAGCAT GGAATAGGCA GGAATCAGTT AAACGCCTTG GTTTTCAAGC TGTAGACATT 2040
GATGGTAACG ATCCAAATGA TGATACATGT GGCCTCTGTG GAGATGGTGG AGATTTGATG 2100
TGTTGTGATG GCTGTCCATC AACATTTCAT CAGAGCTGCT TAGATATAAA GATGCTTCCC 2160
CCAGGTGATT GGCATTGTCC AAACTGTACT TGCAAATTCT GTGGGATAGC GAGTGATAAA 2220
AATGCCCAGG GAGATGATAC AACAGTCTCC AAGCTTCTCA CCTGTAGTCT GTGTGTAAAA 2280
AAATATCACA GTTCATGCAC ACAGGAGTTT GATGCTCTTT CCATTGACAC CAACAGTCCA 2340
GTCGCTAGGT TTTGCGAGAA GAAATGCAGA GAGCTCTTTG AACAGTTGCA GAAGTATCTT 2400
GGGGTCAAAC ATGAACTAGA TGCTGGGTTT TCATGGTCTC TAATTCATAG AGTAGATGCA 2460
GATTCTGATG CCTCTCTCCA AGGACTTCCA CAAAGGGTGG AGTGCAATTC GAAGCTGGCT 2520
GTTTCTTTGT CTGTCATGGA CGAGTGCTTT TTGCCAGTTG TTGATAGGAG GAGTGGGATC 2580
AATTTAATTC AGAATGTTCT CTACAACTGT GGGTAA 2617
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0054 EOY05682 Theobroma cacao 61 0.0 895
WERAM-Prp-0110 EMJ25684 Prunus persica 59 0.0 871
WERAM-Viv-0024 VIT_05s0020g03420.t01 Vitis vinifera 57 0.0 820
WERAM-Glm-0010 GLYMA01G44870.1 Glycine max 53 0.0 776
WERAM-Met-0033 KEH43887 Medicago truncatula 52 0.0 766
WERAM-Art-0101 AT4G14920.1 Arabidopsis thaliana 46 6e-169 592
WERAM-Sol-0114 Solyc09g076010.2.1 Solanum lycopersicum 46 8e-165 578
WERAM-Bro-0088 Bo5g005570.1 Brassica oleracea 55 2e-136 484
WERAM-Mua-0076 GSMUA_Achr4P21300_001 Musa acuminata 52 5e-117 419
WERAM-Org-0072 ORGLA07G0040300.1 Oryza glaberrima 43 5e-99 360
WERAM-Orni-0071 ONIVA07G03330.1 Oryza nivara 43 6e-99 359
WERAM-Orgl-0070 OGLUM07G04140.1 Oryza glumaepatula 43 6e-99 359
WERAM-Orr-0074 ORUFI07G04440.1 Oryza rufipogon 43 1e-98 358
WERAM-Orm-0068 OMERI07G03260.1 Oryza meridionalis 43 4e-98 357
WERAM-Orl-0111 KN542919.1_FGP001 Oryza longistaminata 43 5e-98 356
WERAM-Ori-0082 BGIOSGA025231-PA Oryza indica 43 8e-98 355
WERAM-Orp-0069 OPUNC07G04530.3 Oryza punctata 42 3e-95 347
WERAM-Orbr-0080 OB07G13580.1 Oryza brachyantha 44 3e-93 340
WERAM-Lep-0071 LPERR07G04130.1 Leersia perrieri 40 4e-93 340
WERAM-Tra-0100 Traes_2DS_F7E8E6B22.1 Triticum aestivum 41 1e-92 338
WERAM-Hov-0069 MLOC_5844.1 Hordeum vulgare 43 2e-92 337
WERAM-Sob-0017 Sb02g004100.1 Sorghum bicolor 43 3e-92 337
WERAM-Aet-0042 EMT29012 Aegilops tauschii 41 3e-92 337
WERAM-Zem-0135 GRMZM2G412492_P01 Zea mays 41 6e-92 336
WERAM-Tru-0097 TRIUR3_33650-P1 Triticum urartu 41 8e-92 336
WERAM-Sei-0098 Si028686m Setaria italica 41 2e-89 327
WERAM-Brr-0108 Bra020653.1-P Brassica rapa 66 5e-89 327
WERAM-Amt-0036 ERN16161 Amborella trichopoda 46 2e-63 241
WERAM-Brd-0130 BRADI5G27517.1 Brachypodium distachyon 37 1e-47 189
WERAM-Sem-0001 EFJ24916 Selaginella moellendorffii 41 3e-47 187
WERAM-Sot-0081 PGSC0003DMT400067527 Solanum tuberosum 37 6e-46 183
WERAM-Orb-0048 OBART04G30730.1 Oryza barthii 37 2e-45 182
WERAM-Arl-0059 fgenesh2_kg.3__ 1623__ AT3G14980.1 Arabidopsis lyrata 39 5e-43 174
WERAM-Php-0118 PP1S59_348V6.1 Physcomitrella patens 31 8e-38 156
WERAM-Ors-0046 OS04T0691700-01 Oryza sativa 37 1e-28 125
Created Date 25-Jun-2016