WERAM Information

Tag Content
WERAM ID WERAM-Sob-0008
Ensembl Protein ID Sb01g035540.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb01g035540 Sb01g035540.1 Sb01g035540.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 7.30e-50 170.4 589 822
Organism Sorghum bicolor
Domain Profile
  HDM JHDM2
      JHDM2.txt   7 gklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.....................vgilkkkwaeedlkellksie 81 
                    g lNLa klp   ++p++g kl  AyG  +e ++++++tnl +++sd+v +l++                      g+ +++ a+  +++l   + 
  Sb01g035540.1 589 GLLNLAAKLPPDALQPEVGMKLLIAYGSHQELGKGDSVTNLMINMSDVVHMLMHatevhyqcpkrvrsdvseriaNGTSVHANAHTPVQNLNLDMG 684
                    78****************************************************888888888888888887755333333333333333333333 PP
      JHDM2.txt  82 eeeldevtrkrvqdpk......ekpgalWhifaakdaekirellekvskeqga...evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklg 168
                    e+ + + ++ +v++pk      ++ ga+W++f+++d +k++e+l  + +e+ a   ev++++ pi dq++yl+++++k L+++yG+e++t+ Q +g
  Sb01g035540.1 685 EQ-AHKHSISHVEEPKtnssegSQAGAVWDVFRRQDLPKLNEYLAVHREEFAArcqEVSSVKYPIYDQTVYLNDYHKKMLKDQYGIEPYTFHQHIG 779
                    22.44444445554441111125789*********************999987666889999********************************** PP
      JHDM2.txt 169 davlipagapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
                    +av+ipag+p q +nl+s+v++a +F+sPE + e++rl +e r
  Sb01g035540.1 780 EAVFIPAGCPFQLKNLQSTVQLALNFLSPESLPESVRLAQEIR 822
                    ****************************************986 PP
Protein Sequence
(Fasta)		MAAVPEDLRC KRSDGKQWRC SAPSMPDKTV CEKHYVQAKK RSASSALRAS LRRSSASSSS 60
PATAFPFSSS SSSAAARLRA ADEDPPMAVA RPLYGRVAGE AVYVAEPVPA PARRGTAYEG 120
LPRGNAAAAS TAAGLVGRGP VRLPGSGAAG IRSCHQCRKA GGVIWCTSCD RRGYCASCIS 180
RWYSDIPIDD VQNVCPACRG VCNCKVCLQG DNLIKARVQE ISVVDKLRYL HCLLVYVLPV 240
LKGIYSDQCF EIGVETRSSG PKTDILRAKI TSDEQMCSDF CKVPVFDYHR YCPRCLYDLC 300
LDCCRDIRHS RGEYTEGHVE DKGRDSFNKR ARLEPSAESV NDKSLSWPID INNIDIRSLF 360
PTWRVNNDGS ITCGPHEAGG CGSSKLVLRR IFKINWIAKL VKSSEEMVSG CKVHDLEDGC 420
LSCSDGRRLE FTGQRNLGLS KCSNSDGIGR NCVYSPVLED LKYEGIIHFR KHWINAEPII 480
IRKAFEPSLS SSWDPLSIWR GIQEIMDEEM DEDVVVKAVD CSNQSEVDIK LKQFIKGYSD 540
GSKGGDGHLL MLKLKEWPRP SVLEAFLLCQ RPEFIVNFPL VDFIHPRWGL LNLAAKLPPD 600
ALQPEVGMKL LIAYGSHQEL GKGDSVTNLM INMSDVVHML MHATEVHYQC PKRVRSDVSE 660
RIANGTSVHA NAHTPVQNLN LDMGEQAHKH SISHVEEPKT NSSEGSQAGA VWDVFRRQDL 720
PKLNEYLAVH REEFAARCQE VSSVKYPIYD QTVYLNDYHK KMLKDQYGIE PYTFHQHIGE 780
AVFIPAGCPF QLKNLQSTVQ LALNFLSPES LPESVRLAQE IRCLPNGHLA KLKMLEVKKI 840
SLYAASSAVR EIQRITLDPK FNLDSSFEDQ NLTRAVSENL ARVNKQKVSC S 891
Nucleotide Sequence
(Fasta)		ATGGCGGCCG TGCCGGAGGA CCTCCGCTGC AAGCGCTCCG ACGGTAAGCA GTGGCGCTGC 60
AGCGCGCCCT CCATGCCCGA CAAGACCGTC TGCGAGAAGC ACTACGTCCA GGCCAAGAAG 120
CGCTCCGCCT CCTCCGCGCT CCGCGCCTCG CTCCGCCGCT CCTCAGCCTC CTCCTCCTCC 180
CCCGCGACCG CCTTCCCGTT CTCCTCCTCC TCCTCCTCCG CGGCCGCTCG CCTCCGCGCC 240
GCCGACGAGG ACCCGCCCAT GGCGGTCGCG AGGCCCCTCT ACGGCAGGGT CGCCGGAGAG 300
GCGGTGTACG TGGCTGAACC GGTGCCGGCG CCCGCGCGGA GGGGGACCGC CTACGAAGGG 360
CTGCCCCGGG GCAATGCGGC TGCTGCGAGC ACCGCGGCGG GGCTGGTCGG CAGAGGCCCA 420
GTACGGTTGC CTGGCAGTGG CGCTGCAGGG ATAAGGAGTT GCCACCAGTG CCGGAAAGCT 480
GGGGGTGTCA TTTGGTGTAC CAGCTGTGAT AGGAGAGGGT ACTGTGCCAG CTGCATCTCC 540
AGATGGTACT CTGACATTCC GATTGATGAT GTTCAAAATG TTTGTCCAGC ATGCCGTGGC 600
GTTTGTAATT GCAAAGTTTG CTTACAAGGA GACAACTTAA TAAAGGCTAG GGTGCAAGAA 660
ATATCCGTTG TTGATAAGTT GAGATATCTT CATTGCCTTT TGGTTTATGT TCTTCCAGTA 720
CTGAAGGGGA TTTATTCTGA CCAATGCTTT GAAATAGGTG TTGAAACAAG ATCTTCTGGA 780
CCAAAGACAG ATATCCTCAG AGCAAAGATA ACTTCTGATG AGCAGATGTG CAGTGACTTT 840
TGCAAAGTGC CAGTGTTTGA TTATCACCGA TACTGCCCAA GATGCTTGTA TGATTTATGC 900
CTTGATTGCT GTCGTGATAT ACGTCATTCT CGAGGAGAAT ATACTGAAGG TCATGTTGAA 960
GATAAAGGTA GAGATTCTTT TAACAAAAGA GCAAGGTTGG AACCATCTGC AGAGAGTGTA 1020
AATGACAAGT CATTATCTTG GCCAATAGAT ATAAATAATA TTGACATTAG ATCTTTATTC 1080
CCTACATGGA GAGTCAACAA TGATGGCAGC ATCACTTGTG GACCTCATGA GGCTGGTGGT 1140
TGTGGCTCCT CAAAGTTGGT GTTAAGGCGG ATATTCAAAA TAAATTGGAT TGCTAAACTT 1200
GTAAAAAGTT CTGAAGAAAT GGTCAGTGGT TGCAAAGTAC ATGATTTGGA GGATGGATGT 1260
TTGTCTTGCA GTGATGGCAG AAGATTGGAG TTTACTGGTC AGCGAAATCT CGGTCTCTCA 1320
AAATGCTCAA ACAGTGATGG GATTGGTAGG AATTGTGTGT ACTCTCCTGT ATTGGAGGAC 1380
TTAAAATACG AAGGCATCAT TCACTTTCGT AAGCATTGGA TAAACGCGGA GCCTATTATT 1440
ATCAGGAAAG CATTTGAGCC TTCTCTATCA TCAAGCTGGG ATCCCTTGAG TATTTGGAGA 1500
GGTATCCAGG AGATCATGGA TGAAGAAATG GATGAAGATG TCGTAGTCAA GGCTGTGGAC 1560
TGCTCGAACC AATCAGAGGT AGATATCAAG CTCAAACAGT TTATCAAAGG CTACTCAGAT 1620
GGCAGCAAAG GAGGAGATGG TCACTTGTTG ATGCTGAAAT TGAAAGAGTG GCCCCGACCC 1680
AGTGTCTTGG AGGCGTTTCT GTTGTGCCAA AGACCAGAAT TTATTGTCAA CTTTCCTCTT 1740
GTTGATTTTA TTCATCCTAG ATGGGGTCTC CTAAACCTTG CTGCCAAGTT ACCCCCAGAT 1800
GCCTTACAGC CTGAAGTAGG GATGAAGCTG CTAATTGCAT ATGGAAGTCA CCAAGAACTT 1860
GGTAAAGGTG ATTCAGTGAC AAATCTAATG ATTAACATGA GCGATGTGGT TCACATGTTA 1920
ATGCATGCAA CTGAAGTGCA TTACCAATGT CCCAAGAGGG TACGGTCTGA TGTATCTGAA 1980
AGGATTGCTA ATGGAACTAG TGTGCATGCA AATGCTCACA CTCCTGTTCA AAATCTGAAT 2040
CTGGATATGG GGGAGCAAGC GCACAAACAT TCAATTTCAC ACGTCGAGGA GCCAAAAACT 2100
AATAGTTCAG AAGGATCCCA GGCTGGTGCT GTCTGGGATG TATTCCGCAG GCAGGATCTT 2160
CCAAAGCTTA ATGAATATCT AGCTGTTCAT CGGGAAGAAT TTGCAGCTAG ATGTCAAGAA 2220
GTGTCTTCTG TTAAGTATCC GATTTATGAT CAAACTGTGT ACCTTAACGA TTATCATAAG 2280
AAGATGTTGA AGGATCAATA TGGAATTGAA CCCTACACAT TCCACCAACA TATTGGTGAG 2340
GCTGTTTTCA TTCCAGCTGG CTGTCCTTTC CAATTGAAAA ACCTCCAGTC CACGGTTCAA 2400
TTGGCTCTCA ATTTTTTGTC ACCGGAGAGT TTGCCAGAGT CAGTCCGGCT GGCCCAAGAG 2460
ATCCGTTGCC TGCCAAATGG CCATCTTGCA AAACTAAAGA TGCTTGAGGT AAAAAAGATA 2520
TCCTTGTATG CAGCAAGTTC TGCTGTTAGA GAAATTCAGA GAATAACCCT TGATCCCAAG 2580
TTCAATCTTG ATTCTAGTTT CGAGGATCAA AATTTGACTA GGGCGGTTTC AGAGAACTTG 2640
GCAAGAGTAA ACAAGCAGAA GGTATCTTGC AGTTGAGATT CTGGGGTCTC GTGAAATTCT 2700
AACATGCCAT TCAGAGGATT GAAACCGACG CGGAAGTAGA TATAGTGATT GTACATGTAT 2760
TGTATTGTGT CATATGAAAG GAACACATTC TAATTCTTAT TGGGTTACAC ATTGACTTTA 2820
CCTGTATATT GTGGGTTAGG AAGAGTAACA GTTAAGCTCA TGTAGAACAA GATAAAAAGG 2880
CACCGAAAGC TGATTACAGT ACTGAGTTCT AGCTTGGGGA ATTGTTAGTA CAATAATCTC 2940
TATACCTATT GGTAACATCT GAACAGTAAT TGGACCGAAA TTGGTAACCC ACAGGGTTAA 3000
AGATTCGAAT ACTGAGTTTT CACCATGGTT 3031
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sei-0127 Si034162m Setaria italica 83 0.0 1319
WERAM-Orm-0039 OMERI03G15300.1 Oryza meridionalis 70 0.0 1184
WERAM-Org-0036 ORGLA03G0163900.1 Oryza glaberrima 72 0.0 1176
WERAM-Ors-0031 OS03T0346700-01 Oryza sativa 71 0.0 1172
WERAM-Brd-0031 BRADI1G62640.1 Brachypodium distachyon 72 0.0 1169
WERAM-Tra-0139 Traes_4AS_93108583B.2 Triticum aestivum 71 0.0 1167
WERAM-Orr-0036 ORUFI03G17780.1 Oryza rufipogon 69 0.0 1118
WERAM-Orgl-0038 OGLUM03G17600.1 Oryza glumaepatula 69 0.0 1117
WERAM-Orni-0034 ONIVA03G18210.1 Oryza nivara 69 0.0 1102
WERAM-Ori-0042 BGIOSGA012608-PA Oryza indica 70 0.0 1061
WERAM-Orp-0035 OPUNC03G16540.1 Oryza punctata 68 0.0 1059
WERAM-Orb-0036 OBART03G17150.1 Oryza barthii 68 0.0 1056
WERAM-Aet-0090 EMT30788 Aegilops tauschii 75 0.0 1038
WERAM-Lep-0039 LPERR03G14970.1 Leersia perrieri 63 0.0 948
WERAM-Orbr-0043 OB03G26770.1 Oryza brachyantha 75 0.0 895
WERAM-Prp-0108 EMJ09853 Prunus persica 49 0.0 675
WERAM-Thc-0068 EOY11467 Theobroma cacao 48 0.0 661
WERAM-Viv-0089 VIT_14s0060g02420.t01 Vitis vinifera 47 0.0 661
WERAM-Met-0026 AES61379 Medicago truncatula 47 0.0 646
WERAM-Glm-0262 GLYMA20G37910.2 Glycine max 45 0.0 643
WERAM-Amt-0068 ERN16983 Amborella trichopoda 43 3e-173 606
WERAM-Sot-0072 PGSC0003DMT400057764 Solanum tuberosum 45 1e-166 584
WERAM-Sol-0026 Solyc02g078790.2.1 Solanum lycopersicum 46 6e-128 456
WERAM-Art-0095 AT4G00990.1 Arabidopsis thaliana 35 4e-117 420
WERAM-Arl-0098 fgenesh2_kg.6__ 3604__ AT4G00990.1 Arabidopsis lyrata 35 2e-116 418
WERAM-Brr-0086 Bra016801.1-P Brassica rapa 37 2e-108 391
WERAM-Bro-0002 Bo00957s030.1 Brassica oleracea 36 3e-106 384
WERAM-Pot-0063 POPTR_0005s09360.1 Populus trichocarpa 36 1e-105 381
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 34 6e-103 373
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 32 7e-99 359
WERAM-Orl-0076 KN539615.1_FGP001 Oryza longistaminata 34 3e-93 340
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 36 6e-81 300
WERAM-Mua-0068 GSMUA_Achr4P05350_001 Musa acuminata 34 2e-67 255
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 35 2e-63 242
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 28 6e-33 140
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 28 7e-33 140
WERAM-Gaga-0080 ENSGALP00000012399.4 Gallus gallus 28 8e-33 140
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 28 9e-33 139
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 28 1e-32 139
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 28 2e-32 138
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 28 3e-32 138
WERAM-Mum-0157 ENSMUSP00000037628.7 Mus musculus 28 3e-32 138
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 28 3e-32 138
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 28 3e-32 138
WERAM-Ora-0023 ENSOANP00000003317.1 Ornithorhynchus anatinus 28 3e-32 138
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 28 3e-32 138
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 28 3e-32 138
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 28 3e-32 138
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 28 3e-32 138
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 28 3e-32 138
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 28 3e-32 138
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 28 3e-32 137
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 28 3e-32 137
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 28 3e-32 137
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 27 3e-32 137
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 28 3e-32 137
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 28 3e-32 137
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 28 4e-32 137
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 28 4e-32 137
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 28 4e-32 137
WERAM-Ran-0218 ENSRNOP00000067649.2 Rattus norvegicus 28 4e-32 137
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 28 4e-32 137
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 28 4e-32 137
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 28 4e-32 137
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 28 4e-32 137
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 28 4e-32 137
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 28 6e-32 137
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 28 6e-32 137
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 28 6e-32 137
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 28 6e-32 137
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 28 6e-32 137
WERAM-Tag-0001 ENSTGUP00000000018.1 Taeniopygia guttata 28 8e-32 136
WERAM-Lac-0170 ENSLACP00000020024.1 Latimeria chalumnae 28 2e-31 135
WERAM-Xet-0043 ENSXETP00000014664.3 Xenopus tropicalis 29 2e-31 135
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 27 4e-31 134
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 28 4e-31 134
WERAM-Gam-0008 ENSGMOP00000000972.1 Gadus morhua 28 4e-31 134
WERAM-Orla-0053 ENSORLP00000006841.1 Oryzias latipes 28 8e-31 133
Created Date 25-Jun-2016