WERAM Information

Tag Content
WERAM ID WERAM-Sob-0006
Ensembl Protein ID Sb01g015210.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb01g015210 Sb01g015210.1 Sb01g015210.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 4.60e-73 246.2 603 872
Organism Sorghum bicolor
Domain Profile
  HDM JHDM2
      JHDM2.txt   4 krdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvyvgilkkk.waeedlkellksieeeeldev 88 
                    +r g+lNLa+klp+  ++pdlgPk+y AyG+ +e +r++++t+lh+d+sdavnil++  + + +  +++++++l k+++e++l+e+
  Sb01g015210.1 603 PRYGPLNLAVKLPDGALKPDLGPKTYIAYGFHQELGRGDSVTKLHCDMSDAVNILTHTTQVTYEgYQHKKIEKLRKKMKEQDLQEL 688
                    4679*****************************************************55554443444555556666666655443 PP
      JHDM2.txt  91 krvqdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlipagapHqvq 182
                     +  d +++ galW+if+++d +k++++l+k+ ke+++    +v+++ +pihdq +yl+++++++L+eeyGve+wt+ Q lg+av+ipag+pHqv+
  Sb01g015210.1 748 GKSGDHEKTGGALWDIFRREDSDKLQDYLRKHAKEFRHincnPVKQVIHPIHDQIFYLTEEHKRKLKEEYGVEPWTFEQRLGEAVFIPAGCPHQVR 843
                    4567888899***************************999999999************************************************** PP
      JHDM2.txt 183 nlkscvkvaedFvsPEnvkecfrltkeyr 211
                    nlksc+kva dFvsPEnv ec++lt e+r
  Sb01g015210.1 844 NLKSCIKVAMDFVSPENVDECIKLTGEFR 872
                    **************************998 PP
Protein Sequence
(Fasta)		MAISEEPEGA AGDGGGVTTR GSKGRGKGAA KGRGRPKRRS DDRPFAAPAM DGVAFRDMVL 60
RERRHAANVF CERDTDDDNE EIATNQFKPQ RKKRNDAGKK RGPRKTKPEH VDNSKADFPN 120
SKCHGDMKGD GSETVRDKVL QTAKKRKKGD AGKVSVTKRL KRENEEQKKA LSSKRKDCDE 180
TKRKGKKMLT GDNALMCHQC QRNDKGRVVW CNSCKNKRFC VPCIQRWYPG LSEDEFASQC 240
PYCRKNCNCK GCLRMRGVEE EQTEEKKLEA KIQGVSMNEV KLEQAECDID ERVFCNNCKT 300
SVVDFHRSCK YCFYDLCLSC CGEIRKGEIP GGEEVKILEP EPKDKTYIFA TNNQFQWKNV 360
SSNGMGSSEA PKKSLLLWKS ESDGSICCPP KELGGCGGSV LDLKCLFPEK LLSDLEERAD 420
RIVRSKVFAK AVTKRIDQCP CYDHSGSVRI HDVREAANRK GSSDNHIYCP VATAIKEDDL 480
VHFQMHWTKG EPVIVSDVLQ LTSGLSWEPL VMWRALREKK TNGDVEDEHF AVRAIDCLDW 540
NEVEINIHMF FMGYMKGRMH TTVHWPEMLK LKDWPPSSSF DQRLPRHGAE FISALPFPEY 600
TDPRYGPLNL AVKLPDGALK PDLGPKTYIA YGFHQELGRG DSVTKLHCDM SDAVNILTHT 660
TQVTYEGYQH KKIEKLRKKM KEQDLQELYG VLESGTERDL LSSSTDSRNL TIDETSKISC 720
KDAGQCSDYI DKNNSYAGMH NGAQCITGKS GDHEKTGGAL WDIFRREDSD KLQDYLRKHA 780
KEFRHINCNP VKQVIHPIHD QIFYLTEEHK RKLKEEYGVE PWTFEQRLGE AVFIPAGCPH 840
QVRNLKSCIK VAMDFVSPEN VDECIKLTGE FRRLPPGHRA KEDKLEIKKI ALHALNQVIN 900
FLDPFSEGLK SGAAQPKNKK EADADAEAQK KPKRGRPCRK SNDEATDDKP KKKPGRPRGE 960
KSGDGKSKDG AVDEKPPKMQ GNRLKGSSKR
Nucleotide Sequence
(Fasta)		ATGGCCATCT CGGAGGAACC AGAGGGGGCC GCGGGCGATG GTGGTGGGGT GACGACGCGC 60
GGGAGCAAAG GGCGGGGGAA AGGCGCCGCG AAGGGGCGCG GGAGGCCCAA GCGCCGGAGC 120
GACGACAGGC CCTTCGCGGC GCCGGCGATG GATGGGGTGG CGTTCAGGGA CATGGTGCTT 180
AGGGAGAGGA GGCACGCGGC CAACGTCTTC TGCGAGCGCG ACACCGATGA TGACAATGAG 240
GAGATTGCCA CCAACCAATT CAAGCCTCAG AGAAAGAAGA GAAATGATGC TGGCAAGAAG 300
AGGGGTCCTA GAAAAACGAA ACCAGAACAT GTGGACAACA GCAAGGCCGA CTTCCCCAAC 360
AGCAAATGCC ACGGTGACAT GAAGGGGGAT GGTTCCGAGA CAGTTAGGGA CAAGGTTTTA 420
CAGACTGCAA AGAAGAGGAA GAAAGGAGAT GCAGGGAAGG TTTCTGTCAC AAAAAGGTTG 480
AAAAGAGAGA ATGAAGAACA AAAGAAGGCC TTATCCTCCA AGCGTAAAGA TTGTGATGAA 540
ACTAAAAGGA AAGGGAAGAA GATGTTGACT GGGGATAATG CCCTGATGTG CCACCAGTGC 600
CAAAGGAATG ATAAAGGGAG GGTGGTCTGG TGTAATTCAT GCAAGAATAA GCGCTTCTGC 660
GTGCCATGCA TCCAACGATG GTATCCTGGT TTGTCAGAAG ATGAATTTGC TTCACAATGC 720
CCGTATTGTC GCAAGAACTG TAATTGCAAG GGATGCCTAC GAATGCGAGG AGTTGAAGAG 780
GAGCAGACGG AGGAGAAGAA ATTAGAGGCT AAAATACAAG GTGTTTCGAT GAATGAGGTG 840
AAGTTGGAAC AGGCTGAATG TGATATAGAT GAACGCGTCT TCTGCAATAA CTGTAAAACT 900
TCTGTAGTTG ATTTTCATAG AAGCTGCAAG TACTGTTTTT ATGATTTGTG CCTTTCATGC 960
TGTGGGGAGA TCCGCAAAGG TGAGATTCCT GGAGGAGAGG AGGTAAAGAT CTTAGAGCCT 1020
GAACCAAAAG ACAAGACTTA TATTTTTGCT ACCAATAATC AGTTCCAATG GAAAAATGTG 1080
TCTTCCAATG GAATGGGTTC TAGTGAGGCC CCAAAGAAGT CTCTACTACT GTGGAAATCA 1140
GAAAGTGATG GTAGCATATG TTGCCCACCG AAGGAGCTAG GAGGCTGTGG TGGTTCAGTT 1200
TTGGACCTCA AATGCTTGTT CCCAGAGAAA TTACTTTCTG ACTTAGAAGA ACGAGCTGAC 1260
AGAATTGTGA GGAGTAAAGT ATTTGCAAAA GCAGTAACCA AAAGAATTGA TCAGTGCCCT 1320
TGTTATGACC ATTCAGGAAG TGTAAGAATT CATGATGTGC GAGAGGCTGC AAATAGGAAA 1380
GGCTCAAGTG ATAATCACAT CTACTGCCCA GTTGCCACTG CCATCAAGGA GGATGACTTA 1440
GTGCACTTTC AGATGCATTG GACAAAAGGT GAGCCAGTTA TAGTTTCTGA CGTTCTTCAG 1500
TTGACCTCTG GTCTCAGTTG GGAGCCATTA GTTATGTGGC GGGCATTGCG AGAGAAAAAG 1560
ACTAATGGTG ATGTTGAAGA TGAGCACTTT GCTGTCAGGG CAATAGACTG CCTTGATTGG 1620
AATGAGGTGG AAATTAATAT ACATATGTTT TTTATGGGAT ATATGAAAGG CAGAATGCAC 1680
ACCACAGTAC ACTGGCCTGA GATGCTTAAG CTGAAGGACT GGCCACCATC TAGTTCATTT 1740
GATCAGAGGT TGCCTCGCCA TGGCGCTGAG TTTATCAGTG CATTGCCATT TCCTGAGTAC 1800
ACTGATCCTC GATATGGTCC ACTAAATCTT GCAGTCAAGC TTCCTGATGG TGCACTGAAG 1860
CCAGATCTTG GACCCAAAAC TTACATTGCT TATGGATTTC ACCAAGAGTT AGGCAGGGGT 1920
GATTCTGTGA CCAAGCTTCA CTGCGACATG TCTGATGCAG TAAATATATT AACACATACA 1980
ACACAAGTGA CCTATGAGGG TTATCAACAT AAGAAGATAG AGAAACTCAG AAAGAAAATG 2040
AAAGAACAAG ATCTTCAGGA ACTTTATGGT GTTTTAGAAT CTGGCACTGA ACGAGACCTA 2100
TTATCATCTT CTACTGATTC CAGGAATTTA ACCATTGACG AAACATCAAA GATCTCATGT 2160
AAAGATGCAG GCCAGTGTTC AGATTACATT GACAAGAATA ATAGTTATGC TGGGATGCAT 2220
AATGGTGCTC AGTGTATTAC GGGCAAGAGT GGAGACCATG AGAAAACTGG TGGTGCTTTG 2280
TGGGATATTT TCCGAAGAGA AGATTCTGAC AAGCTACAAG ATTATCTTAG GAAACATGCC 2340
AAAGAATTCC GGCATATCAA TTGCAATCCT GTGAAACAGG TTATTCACCC AATTCACGAT 2400
CAGATTTTCT ACTTAACTGA GGAGCATAAG AGAAAGCTCA AGGAAGAATA TGGTGTTGAA 2460
CCCTGGACGT TTGAGCAGAG GCTTGGTGAA GCGGTTTTTA TTCCTGCTGG ATGTCCTCAC 2520
CAAGTGAGGA ATCTGAAGTC TTGCATCAAG GTTGCAATGG ACTTTGTTTC CCCAGAAAAC 2580
GTCGATGAGT GCATAAAACT GACTGGAGAG TTTAGGCGAC TTCCACCTGG TCACAGGGCT 2640
AAAGAGGATA AACTGGAGAT TAAGAAGATT GCTCTTCATG CTCTGAACCA AGTAATAAAT 2700
TTCTTGGATC CTTTCTCTGA GGGGTTGAAG AGTGGAGCTG CCCAACCCAA GAATAAAAAA 2760
GAAGCTGATG CTGATGCTGA AGCACAGAAG AAGCCTAAAA GGGGTCGCCC ATGTCGCAAG 2820
TCGAACGATG AAGCTACTGA CGATAAGCCC AAAAAGAAGC CTGGTCGTCC CAGAGGTGAG 2880
AAGAGCGGAG ACGGCAAGTC CAAAGATGGT GCTGTTGATG AGAAGCCTCC TAAAATGCAG 2940
GGCAATCGCC TGAAAGGCTC TAGCAAGCGG TAGGTGATTG ATCGGTTCAC TGCTGACAGG 3000
GAAAGTAAGG CATGGTGGCT GCACTGACCC AACCTGGACG TAGGTATTTT GGAAGCAGGT 3060
AGATTCTAGA ATAGACCGGG CATTTTGTCA CCCCTAGACG CCATTGTGGG CTGTGGCGTC 3120
TGGCTTTTGT TCATATGTGG TGATTGCCGG CTGGCACCAT TCTGGAAGAA CCATGCTAGG 3180
TGCTCGCTGT ACAAGACTCT TCATGTAGCG GGCTATGGTG ATTGGCAGTT CCGCATGTCT 3240
GTTGCTGATA TTGGTAGTAA TTGACCTGAA TAGATGTGGT CATTTGAACT CTCTGGATTC 3300
TGGTTTTATA TATCCAATCC ATTGGCTGAG GC 3333
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 70 0.0 1298
WERAM-Sei-0128 Si034182m Setaria italica 73 0.0 1261
WERAM-Org-0037 ORGLA03G0207400.1 Oryza glaberrima 58 0.0 1077
WERAM-Ori-0043 BGIOSGA012927-PA Oryza indica 61 0.0 1053
WERAM-Orbr-0045 OB03G31290.1 Oryza brachyantha 65 0.0 1041
WERAM-Brd-0103 BRADI4G27417.1 Brachypodium distachyon 60 0.0 1040
WERAM-Ors-0026 OS02T0828900-01 Oryza sativa 57 0.0 1039
WERAM-Orm-0031 OMERI02G35990.1 Oryza meridionalis 57 0.0 1021
WERAM-Orni-0109 ONIVA10G14230.1 Oryza nivara 60 0.0 1016
WERAM-Orb-0029 OBART02G38100.1 Oryza barthii 56 0.0 1014
WERAM-Orgl-0016 OGLUM01G49660.1 Oryza glumaepatula 56 0.0 1012
WERAM-Orp-0027 OPUNC02G35390.1 Oryza punctata 57 0.0 1001
WERAM-Lep-0033 LPERR02G31600.1 Leersia perrieri 63 0.0 990
WERAM-Orr-0028 ORUFI02G39830.1 Oryza rufipogon 55 0.0 968
WERAM-Orl-0076 KN539615.1_FGP001 Oryza longistaminata 59 0.0 940
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 56 0.0 741
WERAM-Prp-0116 EMJ12151 Prunus persica 50 0.0 736
WERAM-Tra-0032 Traes_1DS_20D6E2B0D.1 Triticum aestivum 55 0.0 736
WERAM-Aet-0028 EMT26740 Aegilops tauschii 55 0.0 729
WERAM-Glm-0118 GLYMA10G43080.2 Glycine max 50 0.0 717
WERAM-Sol-0064 Solyc04g049140.2.1 Solanum lycopersicum 45 0.0 711
WERAM-Thc-0088 EOY14163 Theobroma cacao 49 0.0 704
WERAM-Met-0165 KEH24644 Medicago truncatula 45 0.0 681
WERAM-Pot-0063 POPTR_0005s09360.1 Populus trichocarpa 49 0.0 673
WERAM-Sot-0046 PGSC0003DMT400042379 Solanum tuberosum 49 0.0 665
WERAM-Bro-0174 Bo9g038630.1 Brassica oleracea 46 0.0 655
WERAM-Viv-0067 VIT_10s0116g00960.t01 Vitis vinifera 49 0.0 654
WERAM-Mua-0155 GSMUA_AchrUn_randomP11860_001 Musa acuminata 45 0.0 649
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 46 0.0 648
WERAM-Brr-0135 Bra027055.1-P Brassica rapa 48 0.0 639
WERAM-Art-0009 AT1G11950.1 Arabidopsis thaliana 46 0.0 637
WERAM-Arl-0004 Al_scaffold_0002_290 Arabidopsis lyrata 47 3e-179 626
WERAM-Amt-0077 ERM98415 Amborella trichopoda 42 2e-158 557
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 47 2e-146 517
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 35 2e-58 225
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 35 2e-57 221
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 36 5e-57 220
WERAM-Xim-0102 ENSXMAP00000009010.1 Xiphophorus maculatus 35 7e-57 220
WERAM-Pof-0098 ENSPFOP00000008824.2 Poecilia formosa 35 9e-57 219
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 35 1e-56 219
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 35 2e-56 218
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 34 4e-56 217
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 35 4e-56 217
WERAM-Drm-0063 FBpp0081541 Drosophila melanogaster 36 2e-55 215
WERAM-Xet-0043 ENSXETP00000014664.3 Xenopus tropicalis 34 3e-55 214
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 36 5e-55 214
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 35 5e-55 214
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 35 6e-55 213
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 35 6e-55 213
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 36 6e-55 213
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 35 6e-55 213
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 36 6e-55 213
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 35 7e-55 213
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 35 7e-55 213
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 36 7e-55 213
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 35 7e-55 213
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 35 7e-55 213
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 35 7e-55 213
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 35 7e-55 213
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 36 8e-55 213
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 35 8e-55 213
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 35 8e-55 213
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 35 8e-55 213
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 35 8e-55 213
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 35 9e-55 213
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 36 9e-55 213
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 35 1e-54 213
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 35 1e-54 213
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 36 1e-54 213
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 36 1e-54 212
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 36 2e-54 212
WERAM-Ran-0218 ENSRNOP00000067649.2 Rattus norvegicus 35 2e-54 212
WERAM-Mum-0157 ENSMUSP00000037628.7 Mus musculus 35 3e-54 211
WERAM-Lac-0170 ENSLACP00000020024.1 Latimeria chalumnae 35 4e-54 211
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 35 5e-54 210
WERAM-Ora-0023 ENSOANP00000003317.1 Ornithorhynchus anatinus 34 5e-53 207
WERAM-Tas-0095 ENSTSYP00000010010.1 Tarsius syrichta 34 1e-51 202
Created Date 25-Jun-2016