| Tag |
Content |
| WERAM ID |
WERAM-Pot-0078 |
| Ensembl Protein ID |
POPTR_0006s15380.1 |
| Gene Name |
POPTR_0006s15380g |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HMT |
PRMT |
2.70e-118 |
395.9 |
120 |
429 |
|
| Organism |
Populus trichocarpa |
| Domain Profile |
HMT PRMT
PRMT.txt 2 qqylqslsel......LesgvyeemlkDevrtdaYreailknktllkdkvvldvGaGtGiLslfaakagarkvyavekspmakvarkvvkv 86
++y++s+s++ L + +emlkD vrt++Y+++i++nk+l+kdkvvldvGaGtGiLslf+akaga++vyave+s +a++a+++v++
POPTR_0006s15380.1 120 DYYFDSYSHFgtvdvsLLILTLQEMLKDGVRTKTYQNVIFQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSHIANMAKEIVES 210
89999999983322222223579******************************************************************** PP
PRMT.txt 87 nglkdrvtvikgkveelelpkekvDiivSEllgsfllnEsllpsvlhardkfLkddglslPdkatlyvapiedtklykeekaefwksvygv 177
ng+++++tv+kgk+e++elp+ kvDii+SE++g+fll+E++l+svl+ardk+L+ dg++lPdka+ly+++ied + yke+k+efw++vyg+
POPTR_0006s15380.1 211 NGFSNVITVLKGKIEDIELPVAKVDIIISEWMGYFLLFENMLNSVLYARDKWLVSDGIVLPDKASLYLTAIEDAE-YKEDKIEFWNNVYGF 300
***************************************************************************.*************** PP
PRMT.txt 178 dlsclekaaikeqfesplVdtldkekllsepkkiftfdiskakesdeerelslelevkrnaslhglaayFdvqft.sektvvlStaPetks 267
d+ c++k+a+ e plVdt+d+++++++ ++++t+disk+ ++d +++ +++l+++r +++h+l+ayFdv+ft ++k +++St P +s
POPTR_0006s15380.1 301 DMTCIKKQAMGE----PLVDTVDQNQIVTNCQLLKTMDISKMVSGDTSFTVPFKLVAERDDYIHALVAYFDVSFTkCHKLMGFSTGP--RS 385
******999988....9**********************************************************************..** PP
PRMT.txt 268 pathWkqavlyledpltvkegekis..illlarkknsrdvdyel 309
+athWkq+vlyled+lt+++ge + ++++++kkn+rd+d+++
POPTR_0006s15380.1 386 RATHWKQTVLYLEDVLTICQGEALIgsMTVAPNKKNPRDIDITI 429
***********************9999**************986 PP
|
Protein Sequence
(Fasta) | SQTNRKSNSH NPSVISTEQN PSKILSLPPS SCQVGSKTLK GKKNTKKMGR RKNNQTSTSL 60
NNTQHQATKV CFDDDEEEEN INLDDSIVAT EKAIAMDDVT MSDPNAPFVD GGDDDKTSAD 120
YYFDSYSHFG TVDVSLLILT LQEMLKDGVR TKTYQNVIFQ NKFLFKDKVV LDVGAGTGIL 180
SLFCAKAGAA HVYAVECSHI ANMAKEIVES NGFSNVITVL KGKIEDIELP VAKVDIIISE 240
WMGYFLLFEN MLNSVLYARD KWLVSDGIVL PDKASLYLTA IEDAEYKEDK IEFWNNVYGF 300
DMTCIKKQAM GEPLVDTVDQ NQIVTNCQLL KTMDISKMVS GDTSFTVPFK LVAERDDYIH 360
ALVAYFDVSF TKCHKLMGFS TGPRSRATHW KQTVLYLEDV LTICQGEALI GSMTVAPNKK 420
NPRDIDITIN YSLNGRRCVA SRTQHYKMR 449Protein Fasta Sequence
>POPTR_0006s15380.1|PRMT|Populus trichocarpa
SQTNRKSNSHNPSVISTEQNPSKILSLPPSSCQVGSKTLKGKKNTKKMGRRKNNQTSTSLNNTQHQATKVCFDDDEEEENINLDDSIVATEKAIAMDDVTMSDPNAPFVDGGDDDKTSADYYFDSYSHFGTVDVSLLILTLQEMLKDGVRTKTYQNVIFQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSHIANMAKEIVESNGFSNVITVLKGKIEDIELPVAKVDIIISEWMGYFLLFENMLNSVLYARDKWLVSDGIVLPDKASLYLTAIEDAEYKEDKIEFWNNVYGFDMTCIKKQAMGEPLVDTVDQNQIVTNCQLLKTMDISKMVSGDTSFTVPFKLVAERDDYIHALVAYFDVSFTKCHKLMGFSTGPRSRATHWKQTVLYLEDVLTICQGEALIGSMTVAPNKKNPRDIDITINYSLNGRRCVASRTQHYKMR |
Nucleotide Sequence
(Fasta) | TCGCAAACAA ATAGGAAATC AAACTCCCAT AACCCTTCCG TTATTTCAAC TGAACAAAAC 60
CCTAGTAAAA TTCTCTCACT CCCTCCCTCC TCTTGTCAAG TAGGAAGTAA AACCCTAAAA 120
GGAAAAAAGA ACACGAAAAA AATGGGCCGT CGGAAGAACA ATCAGACCTC AACGAGCCTC 180
AACAACACTC AGCACCAGGC CACCAAAGTC TGCTTCGACG ACGACGAAGA AGAAGAGAAC 240
ATCAATCTCG ATGACTCTAT TGTAGCCACT GAAAAAGCCA TTGCTATGGA TGACGTAACT 300
ATGTCCGACC CCAACGCCCC CTTTGTTGAC GGCGGCGATG ATGATAAAAC CAGCGCCGAT 360
TATTACTTCG ATTCATACTC TCACTTTGGT ACTGTTGATG TTTCCTTACT CATCCTTACA 420
CTGCAGGAAA TGCTGAAGGA TGGAGTGAGA ACTAAAACAT ACCAAAACGT TATTTTTCAG 480
AATAAATTTT TATTTAAGGA TAAAGTAGTA CTTGATGTTG GTGCTGGGAC TGGAATTTTG 540
TCATTGTTTT GTGCCAAAGC TGGGGCTGCC CATGTCTATG CGGTCGAGTG CTCTCATATC 600
GCTAACATGG CCAAAGAGAT TGTTGAGTCA AATGGATTTT CCAATGTTAT AACAGTTTTG 660
AAGGGAAAGA TCGAAGATAT TGAGCTACCA GTTGCTAAAG TGGACATAAT TATTTCAGAG 720
TGGATGGGAT ATTTTCTGTT GTTTGAGAAC ATGTTAAACT CAGTCCTGTA CGCACGTGAT 780
AAATGGCTTG TCAGTGACGG AATTGTGCTG CCAGACAAAG CTTCTCTCTA TTTGACAGCC 840
ATTGAGGATG CTGAATACAA AGAAGATAAG ATTGAGTTTT GGAATAATGT CTATGGCTTT 900
GATATGACCT GCATCAAGAA GCAGGCCATG GGGGAACCTC TTGTTGACAC TGTAGATCAG 960
AATCAAATTG TTACAAATTG CCAGCTGCTC AAGACAATGG ACATCTCTAA AATGGTTTCT 1020
GGGGATACTT CCTTCACAGT TCCTTTTAAG CTTGTAGCAG AACGTGATGA TTACATCCAT 1080
GCATTAGTAG CCTACTTTGA TGTATCATTT ACAAAGTGTC ACAAGTTGAT GGGATTCTCT 1140
ACAGGGCCAA GATCACGAGC TACACATTGG AAACAGACAG TCCTATACCT AGAAGATGTG 1200
CTAACCATTT GTCAAGGGGA GGCACTAATT GGGAGCATGA CTGTCGCACC AAACAAGAAG 1260
AATCCTCGGG ACATTGATAT AACGATCAAC TATTCATTGA ATGGCCGACG CTGTGTGGCC 1320
TCAAGAACTC AACATTATAA AATGCGATGA
1351Nucleotide Fasta Sequence
>POPTR_0006s15380.1|PRMT|Populus trichocarpa
TCGCAAACAAATAGGAAATCAAACTCCCATAACCCTTCCGTTATTTCAACTGAACAAAACCCTAGTAAAATTCTCTCACTCCCTCCCTCCTCTTGTCAAGTAGGAAGTAAAACCCTAAAAGGAAAAAAGAACACGAAAAAAATGGGCCGTCGGAAGAACAATCAGACCTCAACGAGCCTCAACAACACTCAGCACCAGGCCACCAAAGTCTGCTTCGACGACGACGAAGAAGAAGAGAACATCAATCTCGATGACTCTATTGTAGCCACTGAAAAAGCCATTGCTATGGATGACGTAACTATGTCCGACCCCAACGCCCCCTTTGTTGACGGCGGCGATGATGATAAAACCAGCGCCGATTATTACTTCGATTCATACTCTCACTTTGGTACTGTTGATGTTTCCTTACTCATCCTTACACTGCAGGAAATGCTGAAGGATGGAGTGAGAACTAAAACATACCAAAACGTTATTTTTCAGAATAAATTTTTATTTAAGGATAAAGTAGTACTTGATGTTGGTGCTGGGACTGGAATTTTGTCATTGTTTTGTGCCAAAGCTGGGGCTGCCCATGTCTATGCGGTCGAGTGCTCTCATATCGCTAACATGGCCAAAGAGATTGTTGAGTCAAATGGATTTTCCAATGTTATAACAGTTTTGAAGGGAAAGATCGAAGATATTGAGCTACCAGTTGCTAAAGTGGACATAATTATTTCAGAGTGGATGGGATATTTTCTGTTGTTTGAGAACATGTTAAACTCAGTCCTGTACGCACGTGATAAATGGCTTGTCAGTGACGGAATTGTGCTGCCAGACAAAGCTTCTCTCTATTTGACAGCCATTGAGGATGCTGAATACAAAGAAGATAAGATTGAGTTTTGGAATAATGTCTATGGCTTTGATATGACCTGCATCAAGAAGCAGGCCATGGGGGAACCTCTTGTTGACACTGTAGATCAGAATCAAATTGTTACAAATTGCCAGCTGCTCAAGACAATGGACATCTCTAAAATGGTTTCTGGGGATACTTCCTTCACAGTTCCTTTTAAGCTTGTAGCAGAACGTGATGATTACATCCATGCATTAGTAGCCTACTTTGATGTATCATTTACAAAGTGTCACAAGTTGATGGGATTCTCTACAGGGCCAAGATCACGAGCTACACATTGGAAACAGACAGTCCTATACCTAGAAGATGTGCTAACCATTTGTCAAGGGGAGGCACTAATTGGGAGCATGACTGTCGCACCAAACAAGAAGAATCCTCGGGACATTGATATAACGATCAACTATTCATTGAATGGCCGACGCTGTGTGGCCTCAAGAACTCAACATTATAAAATGCGATGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
