WERAM Information

Tag Content
WERAM ID WERAM-Pot-0042
Ensembl Protein ID POPTR_0004s00770.1
Gene Name POPTR_0004s00770g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0004s00770 POPTR_0004s00770.1 POPTR_0004s00770.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 2.90e-51 175.3 696 938
Organism Populus trichocarpa
Domain Profile
  HDM JHDM2
           JHDM2.txt   6 dgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.vgilkkkwaeedlkellksieee.eldevtrkrvq 94 
                          g lN+a k+p+  ++pdlgPk+y AyG  +e +r++++t+lh+d+sdavnil+  ++ l+++ +++ +++l  +  e+ e +++ + +v 
  POPTR_0004s00770.1 696 AGILNVAAKFPEEKLKPDLGPKTYIAYGTREELGRGDSVTKLHCDMSDAVNILTQtADVLLSEAQRSAIEQLKMKHREQdEKEHLEKDKVD 786
                         588***************************************************8678888888888877776655554144556666777 PP
           JHDM2.txt  95 dpk 97 
                         +p+
  POPTR_0004s00770.1 787 NPH 789
                         765 PP
           JHDM2.txt 100 pgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlipagapHqvqnlk 185
                          galW+if+++d++k++e+l+k+ ke+++    +v+++ +pihdq +yl+ +++++L+ee+Gve+wt+ Q  g+av+ipag+pHqv+nl+
  POPTR_0004s00770.1 849 GGALWDIFRREDVPKLEEYLRKHFKEFRHtfcaPVEQVDHPIHDQCFYLNLEHKRKLKEEFGVEAWTFEQRVGEAVFIPAGCPHQVRNLQ 938
                         59**************************9999899999**************************************************95 PP
Protein Sequence
(Fasta)		SDHQCSPSER RKTLSEQIKA PPEIELSKTD DEQFLGARRK ASYEKIKAAS EIESLKNDDQ 60
WCSGTRRKAS SKKIKAPSET ELLKSDDQQC MGTRRKASSK KIMLAPDVGF SESDGKLPPM 120
RFETSSKKIK SVSEIELLKS DDEWSPRVRR KSSSKKVKPV TVSEFLQSNV VPKGQQSGLN 180
KRSRSSSVGV DFEGDSEEDL LEAICVVKMR ERKRTRNSGR DINERSLKEA REKNIGSVNS 240
SSSSSSASAS SSSSVSKRDG YCNGVSAVRN VKVKGQDIKR CHQCMKKERI VVVLCKKCNR 300
VYCIQCIKQW YPEMTEGHFA KRCPFCRKKC NCNVCLHSSG LIKTSKRDIT NSEKVQHLHY 360
LIKLLLPFLE QICDEQTEEM QIEAGIRGSP FDIAENFCYS DERVYCNHCT TSIIDFHRSC 420
PNCSYELCLS CCREIRKGSL SRRAEKKFWY VDRGSGYMHG GDPLPCHSQN PYDHIEPLVL 480
SWNANEDGSI SCPPNEMGGC GDCALELKHI LPPRQVAELK RKAAELLEIC GTEQASLMCK 540
CNETGKGLLR RAAFREGSED NYLYCPASKD ILEDEKLFHF QKHWAKGEPV IVRDVLEETT 600
HLSWEPMVMW RALCENVDSD ISSKMSEVKA IDCLVEINTR QFFKGYMEGR TYHNFWPEML 660
KLKDWPPSDK FENILPRHCD EFIRALPFQE YSDPNAGILN VAAKFPEEKL KPDLGPKTYI 720
AYGTREELGR GDSVTKLHCD MSDAVNILTQ TADVLLSEAQ RSAIEQLKMK HREQDEKEHL 780
EKDKVDNPHI ELDQGNDSLK EENDVSEIRG PQPHPSEINE KLKNSEDVLR GAALSGLPSE 840
GETADTAGGG ALWDIFRRED VPKLEEYLRK HFKEFRHTFC APVEQVDHPI HDQCFYLNLE 900
HKRKLKEEFG VEAWTFEQRV GEAVFIPAGC PHQVRNLQ 938
Nucleotide Sequence
(Fasta)		AGTGATCACC AGTGCTCGCC TTCGGAAAGA AGGAAAACTT TGTCTGAGCA GATTAAGGCA 60
CCCCCAGAAA TTGAATTGTC AAAAACTGAT GATGAGCAGT TTCTGGGAGC AAGAAGGAAA 120
GCTTCATATG AGAAAATTAA GGCAGCCTCT GAAATTGAAT CGTTGAAAAA TGATGATCAG 180
TGGTGTTCAG GAACAAGAAG GAAAGCTTCA TCTAAGAAAA TTAAGGCACC CTCAGAAACT 240
GAATTGTTGA AAAGTGATGA TCAACAGTGC ATGGGAACAA GAAGGAAAGC TTCATCCAAG 300
AAAATTATGT TAGCTCCAGA TGTTGGATTT TCGGAGAGTG ATGGTAAGTT GCCTCCAATG 360
AGATTTGAAA CCTCATCTAA GAAAATTAAG TCAGTTTCAG AAATTGAGTT GTTGAAGAGT 420
GATGATGAGT GGTCACCGCG AGTGAGGAGA AAATCTTCAT CTAAAAAAGT GAAGCCAGTT 480
ACGGTATCTG AGTTTTTGCA GAGTAATGTG GTCCCGAAGG GGCAGCAGAG CGGTTTAAAC 540
AAGCGTAGTA GAAGTAGTTC TGTAGGTGTA GATTTTGAGG GTGATTCAGA AGAGGATCTG 600
TTAGAAGCAA TTTGTGTTGT AAAAATGAGA GAGCGAAAAC GAACTAGGAA TTCAGGGAGG 660
GATATAAATG AGAGAAGTCT GAAGGAGGCC AGAGAAAAAA ATATAGGTTC TGTGAATTCT 720
TCCTCATCTT CTTCTTCAGC ATCAGCTTCT TCTAGCTCAT CAGTTTCAAA ACGTGATGGT 780
TATTGCAATG GTGTGTCTGC AGTGAGAAAT GTGAAGGTCA AAGGACAAGA TATCAAAAGA 840
TGTCACCAGT GCATGAAAAA AGAAAGAATA GTTGTTGTCC TTTGTAAGAA ATGTAATAGA 900
GTGTACTGCA TACAGTGCAT CAAGCAATGG TATCCTGAGA TGACAGAAGG GCACTTTGCA 960
AAACGATGCC CATTTTGTCG TAAAAAATGC AATTGTAATG TGTGTTTGCA CTCAAGCGGG 1020
TTGATTAAGA CATCAAAAAG GGATATCACC AACAGTGAAA AGGTTCAGCA TCTGCATTAT 1080
TTGATCAAGT TGCTGCTTCC TTTTCTGGAA CAAATCTGTG ATGAACAAAC TGAAGAAATG 1140
CAGATTGAGG CTGGCATTCG AGGTTCCCCT TTTGATATAG CTGAGAACTT TTGCTACAGT 1200
GATGAGCGTG TATATTGCAA TCACTGCACC ACTTCTATCA TCGACTTTCA TCGCAGCTGT 1260
CCAAATTGTT CTTATGAACT GTGCCTTAGT TGTTGTCGAG AAATTCGTAA GGGAAGCCTT 1320
TCAAGACGTG CTGAAAAGAA GTTTTGGTAT GTGGATAGAG GCTCTGGTTA TATGCATGGT 1380
GGAGATCCAT TACCTTGTCA TTCCCAAAAT CCTTATGACC ACATTGAGCC TCTAGTTCTA 1440
TCATGGAATG CCAATGAAGA TGGTAGCATT TCTTGCCCTC CAAATGAAAT GGGTGGTTGT 1500
GGTGATTGTG CATTGGAGCT AAAGCATATC CTTCCGCCAA GACAGGTTGC GGAGTTGAAA 1560
AGGAAGGCAG CAGAATTATT GGAAATTTGT GGCACTGAAC AGGCAAGTTT GATGTGCAAG 1620
TGCAATGAAA CAGGGAAAGG ACTGTTAAGA AGAGCAGCGT TTAGGGAAGG ATCTGAGGAC 1680
AATTACTTGT ATTGTCCTGC CTCAAAGGAT ATTCTTGAGG ATGAAAAACT TTTTCACTTC 1740
CAAAAGCACT GGGCTAAAGG TGAGCCAGTT ATAGTTCGTG ATGTTCTTGA GGAGACAACT 1800
CATTTGAGCT GGGAGCCGAT GGTCATGTGG CGTGCACTAT GTGAAAATGT GGATTCAGAT 1860
ATTAGTTCAA AGATGTCTGA AGTGAAGGCT ATTGATTGTT TGGTGGAGAT TAATACCCGA 1920
CAGTTTTTTA AAGGCTATAT GGAAGGGAGA ACATATCATA ACTTTTGGCC TGAGATGCTT 1980
AAGCTGAAGG ACTGGCCTCC ATCAGATAAA TTTGAAAACA TTTTGCCACG CCATTGTGAT 2040
GAGTTTATCA GAGCACTGCC ATTTCAAGAA TACAGTGATC CAAATGCTGG AATCCTGAAT 2100
GTTGCTGCGA AGTTTCCTGA AGAAAAGCTG AAACCAGACT TGGGTCCAAA AACTTATATT 2160
GCATATGGTA CAAGAGAAGA GCTTGGAAGA GGGGACTCGG TGACCAAGCT TCACTGTGAT 2220
ATGTCAGATG CGGTGAATAT TTTGACACAA ACTGCTGATG TACTATTAAG TGAAGCACAA 2280
CGCTCTGCCA TTGAGCAGTT GAAAATGAAG CACAGGGAAC AGGATGAGAA GGAACATTTA 2340
GAAAAAGACA AGGTAGACAA TCCTCACATT GAACTTGATC AGGGAAATGA TAGTTTGAAA 2400
GAAGAGAATG ATGTCTCAGA AATTAGAGGG CCACAGCCGC ACCCCTCTGA AATTAATGAA 2460
AAACTAAAGA ACTCTGAAGA TGTGTTAAGA GGAGCTGCAC TTTCTGGTTT ACCCTCAGAA 2520
GGGGAGACAG CGGACACAGC AGGTGGTGGC GCTTTGTGGG ACATTTTCAG GAGGGAGGAT 2580
GTTCCCAAGT TAGAGGAATA TCTTAGAAAG CACTTCAAAG AATTCAGGCA CACTTTCTGT 2640
GCCCCCGTAG AACAGGTCGA TCATCCAATT CATGACCAAT GTTTCTATTT AAATTTGGAG 2700
CATAAAAGGA AATTGAAGGA GGAATTCGGA GTTGAAGCCT GGACATTTGA ACAAAGAGTT 2760
GGAGAGGCTG TATTTATACC CGCTGGATGC CCACACCAAG TTAGGAATCT TCAG 2815
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0081 EOY28779 Theobroma cacao 60 0.0 880
WERAM-Glm-0083 GLYMA07G39310.2 Glycine max 61 0.0 826
WERAM-Viv-0067 VIT_10s0116g00960.t01 Vitis vinifera 61 0.0 800
WERAM-Bro-0174 Bo9g038630.1 Brassica oleracea 58 0.0 777
WERAM-Brr-0135 Bra027055.1-P Brassica rapa 58 0.0 775
WERAM-Prp-0037 EMJ15852 Prunus persica 60 0.0 772
WERAM-Met-0115 AES92666 Medicago truncatula 57 0.0 770
WERAM-Sot-0046 PGSC0003DMT400042379 Solanum tuberosum 56 0.0 770
WERAM-Art-0009 AT1G11950.1 Arabidopsis thaliana 56 0.0 767
WERAM-Arl-0004 Al_scaffold_0002_290 Arabidopsis lyrata 56 0.0 763
WERAM-Sol-0029 Solyc02g081010.1.1 Solanum lycopersicum 56 0.0 748
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 47 2e-171 600
WERAM-Ori-0043 BGIOSGA012927-PA Oryza indica 45 2e-171 600
WERAM-Orbr-0045 OB03G31290.1 Oryza brachyantha 46 6e-171 598
WERAM-Lep-0033 LPERR02G31600.1 Leersia perrieri 45 4e-170 596
WERAM-Org-0037 ORGLA03G0207400.1 Oryza glaberrima 45 2e-169 593
WERAM-Ors-0026 OS02T0828900-01 Oryza sativa 45 2e-166 583
WERAM-Orni-0109 ONIVA10G14230.1 Oryza nivara 44 2e-165 580
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 46 2e-163 573
WERAM-Sei-0128 Si034182m Setaria italica 46 8e-162 568
WERAM-Orgl-0016 OGLUM01G49660.1 Oryza glumaepatula 44 1e-161 568
WERAM-Orb-0037 OBART03G22260.1 Oryza barthii 44 2e-161 567
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 43 4e-161 566
WERAM-Orm-0031 OMERI02G35990.1 Oryza meridionalis 44 7e-161 565
WERAM-Orp-0036 OPUNC03G20970.1 Oryza punctata 43 3e-157 553
WERAM-Mua-0155 GSMUA_AchrUn_randomP11860_001 Musa acuminata 43 3e-155 546
WERAM-Orl-0076 KN539615.1_FGP001 Oryza longistaminata 43 2e-152 537
WERAM-Tra-0176 Traes_5AL_C9FC195D1.2 Triticum aestivum 47 2e-149 527
WERAM-Aet-0048 EMT13865 Aegilops tauschii 46 8e-148 522
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 43 3e-146 517
WERAM-Orr-0028 ORUFI02G39830.1 Oryza rufipogon 42 1e-145 515
WERAM-Amt-0068 ERN16983 Amborella trichopoda 41 2e-140 497
WERAM-Brd-0103 BRADI4G27417.1 Brachypodium distachyon 49 3e-136 484
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 49 3e-136 483
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 31 1e-36 153
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 30 4e-36 150
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 31 8e-36 150
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 31 1e-35 149
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 30 3e-34 145
WERAM-Drm-0063 FBpp0081541 Drosophila melanogaster 30 1e-31 136
WERAM-Lac-0050 ENSLACP00000007100.1 Latimeria chalumnae 28 3e-30 131
WERAM-Sah-0148 ENSSHAP00000015447.1 Sarcophilus harrisii 27 4e-30 131
WERAM-Mod-0072 ENSMODP00000027999.1 Monodelphis domestica 27 8e-30 130
WERAM-Anp-0097 ENSAPLP00000011260.1 Anas platyrhynchos 27 1e-26 119
WERAM-Meg-0116 ENSMGAP00000012206.2 Meleagris gallopavo 27 1e-26 119
WERAM-Gaga-0028 ENSGALP00000004639.4 Gallus gallus 27 2e-26 119
WERAM-Caj-0082 ENSCJAP00000013430.1 Callithrix jacchus 28 2e-26 119
WERAM-Nol-0130 ENSNLEP00000014658.1 Nomascus leucogenys 28 3e-26 118
WERAM-Gog-0171 ENSGGOP00000015323.2 Gorilla gorilla 28 3e-26 118
WERAM-Pat-0019 ENSPTRP00000004380.4 Pan troglodytes 28 3e-26 118
WERAM-Poa-0025 ENSPPYP00000002793.1 Pongo abelii 28 3e-26 118
WERAM-Paa-0167 ENSPANP00000020474.1 Papio anubis 28 3e-26 118
WERAM-Mup-0126 ENSMPUP00000011032.1 Mustela putorius furo 27 4e-26 117
WERAM-Soa-0109 ENSSARP00000010281.1 Sorex araneus 27 3e-25 115
WERAM-Ect-0040 ENSETEP00000003644.1 Echinops telfairi 26 7e-25 113
WERAM-Tut-0085 ENSTTRP00000006797.1 Tursiops truncatus 27 1e-24 112
WERAM-Eqc-0089 ENSECAP00000010951.1 Equus caballus 26 1e-24 112
WERAM-Myl-0200 ENSMLUP00000019481.1 Myotis lucifugus 27 2e-24 112
WERAM-Caf-0138 ENSCAFP00000019288.3 Canis familiaris 27 3e-24 111
WERAM-Aim-0103 ENSAMEP00000010062.1 Ailuropoda melanoleuca 27 4e-24 111
WERAM-Pes-0084 ENSPSIP00000010379.1 Pelodiscus sinensis 25 4e-24 111
WERAM-Sus-0072 ENSSSCP00000010901.2 Sus scrofa 27 4e-24 111
WERAM-Bot-0015 ENSBTAP00000002067.5 Bos taurus 27 5e-24 110
WERAM-Cap-0153 ENSCPOP00000012777.2 Cavia porcellus 27 1e-23 110
WERAM-Otg-0151 ENSOGAP00000012868.2 Otolemur garnettii 26 1e-23 109
WERAM-Pem-0103 ENSPMAP00000010459.1 Petromyzon marinus 24 1e-23 109
WERAM-Gam-0134 ENSGMOP00000013905.1 Gadus morhua 26 2e-23 108
WERAM-Ora-0091 ENSOANP00000016437.2 Ornithorhynchus anatinus 25 6e-23 107
WERAM-Ova-0037 ENSOARP00000004931.1 Ovis aries 27 8e-23 107
WERAM-Xet-0053 ENSXETP00000016739.3 Xenopus tropicalis 27 3e-22 105
WERAM-Tas-0048 ENSTSYP00000004523.1 Tarsius syrichta 28 7e-22 103
WERAM-Ptv-0190 ENSPVAP00000016931.1 Pteropus vampyrus 27 3e-21 101
WERAM-Loa-0019 ENSLAFP00000001234.4 Loxodonta africana 24 7e-21 100
WERAM-Fec-0091 ENSFCAP00000007544.3 Felis catus 24 1e-20 99.8
WERAM-Prc-0100 ENSPCAP00000009289.1 Procavia capensis 26 1e-20 99.4
Created Date 25-Jun-2016